FFCP PHASE1:Hg19::chr7:27163592..27163605,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4086|description=CAGE_peak_at_chr7:27163592..27163605,-|id=chr7:27163592..27163605,-|ontology_enrichment_celltype=CL:0002539!8.15e-17!10;CL:1000449!6.45e-10!16;CL:1000507!1.71e-09!12;CL:1000494!1.71e-09!12;CL:1000497!9.57e-09!18;CL:0002518!9.57e-09!18;CL:0002681!1.02e-08!13;CL:0002584!1.02e-08!13;CL:0000359!1.87e-08!32;CL:0000192!9.88e-08!42;CL:0000514!9.88e-08!42;CL:0000183!1.18e-07!59;CL:0000322!1.62e-07!3;CL:0002579!2.68e-07!3;CL:0000650!2.94e-07!3;CL:1000618!2.94e-07!3;CL:1001318!2.94e-07!3;CL:0002173!2.94e-07!3;CL:1000500!2.94e-07!3;CL:0002582!4.26e-07!3|ontology_enrichment_celltype_v019=CL:0000322;7.02e-25;3!CL:0002595;1.05e-15;5!CL:0002593;1.57e-10;2!CL:0000650;2.99e-10;2!CL:1000500;2.99e-10;2!CL:1000618;2.99e-10;2!CL:1001318;2.99e-10;2!CL:0002173;2.99e-10;2!CL:0000359;1.09e-09;32!CL:0002202;5.87e-09;9!CL:0002632;5.87e-09;9!CL:0002539;3.25e-08;10!CL:0002582;2.97e-07;3|ontology_enrichment_celltype_v019_2=CL:0000322,7.93e-25,3;CL:0002595,1.05e-15,5;CL:0002593,1.57e-10,2;CL:0000650,3.58e-10,2;CL:1000500,3.58e-10,2;CL:1000618,3.58e-10,2;CL:1001318,3.58e-10,2;CL:0002173,3.58e-10,2;CL:0000359,1.76e-09,32;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002539,3.25e-08,10;CL:0002582,2.63e-07,3;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!8.36e-08!14|ontology_enrichment_disease_v019=DOID:3910;2.99e-10;2|ontology_enrichment_disease_v019_2=DOID:3910,3.27e-10,2|ontology_enrichment_uberon=UBERON:0004237!8.15e-17!10;UBERON:0004695!8.15e-17!10;UBERON:0002111!8.15e-17!10;UBERON:0004178!8.15e-17!10;UBERON:0000947!3.32e-13!21;UBERON:0010191!3.32e-13!21;UBERON:0004573!1.29e-12!33;UBERON:0004571!1.29e-12!33;UBERON:0001135!5.38e-11!15;UBERON:0003914!4.75e-10!118;UBERON:0004211!6.45e-10!16;UBERON:0001285!6.45e-10!16;UBERON:0007684!6.45e-10!16;UBERON:0003220!6.45e-10!16;UBERON:0004208!6.45e-10!16;UBERON:0003886!1.42e-09!63;UBERON:0001637!1.68e-09!42;UBERON:0003509!1.68e-09!42;UBERON:0004572!1.68e-09!42;UBERON:0009773!1.71e-09!12;UBERON:0001231!1.71e-09!12;UBERON:0004810!1.71e-09!12;UBERON:0006555!2.69e-09!17;UBERON:0005103!2.69e-09!17;UBERON:0000083!2.69e-09!17;UBERON:0009201!2.69e-09!17;UBERON:0004819!2.69e-09!17;UBERON:0006553!2.69e-09!17;UBERON:0003074!2.69e-09!17;UBERON:0003060!2.69e-09!17;UBERON:0000464!5.91e-09!104;UBERON:0000080!9.57e-09!18;UBERON:0002120!9.57e-09!18;UBERON:0004875!9.57e-09!18;UBERON:0005721!9.57e-09!18;UBERON:0005754!9.57e-09!18;UBERON:0007297!9.57e-09!18;UBERON:0001225!1.02e-08!13;UBERON:0008987!1.02e-08!13;UBERON:0002553!2.36e-08!70;UBERON:0000058!6.57e-08!26;UBERON:0004876!8.28e-08!20;UBERON:0003688!1.24e-07!6;UBERON:0002358!1.24e-07!6;UBERON:0003684!1.24e-07!6;UBERON:0001178!1.24e-07!6;UBERON:0004821!1.62e-07!3;UBERON:0003215!1.62e-07!3;UBERON:0002299!1.62e-07!3;UBERON:0006524!1.62e-07!3;UBERON:0008874!1.62e-07!3;UBERON:0002169!1.62e-07!3;UBERON:0004894!1.62e-07!3;UBERON:0002113!1.97e-07!27;UBERON:0003918!1.97e-07!27;UBERON:0005095!1.97e-07!27;UBERON:0007687!1.97e-07!27;UBERON:0003887!2.09e-07!21;UBERON:0003567!2.94e-07!3;UBERON:0003838!2.94e-07!3;UBERON:0005169!2.94e-07!3;UBERON:0002321!2.94e-07!3;UBERON:0005215!2.94e-07!3;UBERON:0002303!2.94e-07!3;UBERON:0002319!2.94e-07!3;UBERON:0001851!4.98e-07!16;UBERON:0009569!5.22e-07!113;UBERON:0000466!9.10e-07!126|ontology_enrichment_uberon_v019=UBERON:0004821;7.02e-25;3!UBERON:0007499;7.02e-25;3!UBERON:0003215;7.02e-25;3!UBERON:0010368;7.02e-25;3!UBERON:0009911;7.02e-25;3!UBERON:0002299;7.02e-25;3!UBERON:0006524;7.02e-25;3!UBERON:0008874;7.02e-25;3!UBERON:0002169;7.02e-25;3!UBERON:0004894;7.02e-25;3!UBERON:0009856;6.18e-19;4!UBERON:0003834;1.05e-15;5!UBERON:0001533;1.05e-15;5!UBERON:0003513;1.68e-11;7!UBERON:0002456;1.57e-10;2!UBERON:0004903;2.99e-10;2!UBERON:0003567;2.99e-10;2!UBERON:0003838;2.99e-10;2!UBERON:0003586;2.99e-10;2!UBERON:0005169;2.99e-10;2!UBERON:0002321;2.99e-10;2!UBERON:0005215;2.99e-10;2!UBERON:0002303;2.99e-10;2!UBERON:0002319;2.99e-10;2!UBERON:0002173;2.99e-10;2!UBERON:0002186;2.99e-10;2!UBERON:0004237;3.25e-08;10!UBERON:0004695;3.25e-08;10!UBERON:0002111;3.25e-08;10!UBERON:0004178;3.25e-08;10!UBERON:0004573;4.41e-08;33!UBERON:0004571;4.41e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0004821,7.93e-25,3;UBERON:0003215,7.93e-25,3;UBERON:0010368,7.93e-25,3;UBERON:0009911,7.93e-25,3;UBERON:0002299,7.93e-25,3;UBERON:0006524,7.93e-25,3;UBERON:0008874,7.93e-25,3;UBERON:0002169,7.93e-25,3;UBERON:0004894,7.93e-25,3;UBERON:0003834,1.05e-15,5;UBERON:0001533,1.05e-15,5;UBERON:0003513,1.68e-11,7;UBERON:0002456,1.57e-10,2;UBERON:0004903,3.27e-10,2;UBERON:0002173,3.27e-10,2;UBERON:0002186,3.27e-10,2;UBERON:0003567,3.58e-10,2;UBERON:0003838,3.58e-10,2;UBERON:0003586,3.58e-10,2;UBERON:0005169,3.58e-10,2;UBERON:0002321,3.58e-10,2;UBERON:0005215,3.58e-10,2;UBERON:0002303,3.58e-10,2;UBERON:0002319,3.58e-10,2;UBERON:0004573,3.35e-09,33;UBERON:0004571,3.35e-09,33;UBERON:0004237,3.25e-08,10;UBERON:0004695,3.25e-08,10;UBERON:0002111,3.25e-08,10;UBERON:0004178,3.25e-08,10;UBERON:0001637,2.75e-07,42;UBERON:0003509,2.75e-07,42;UBERON:0004572,2.75e-07,42;UBERON:0003914,3.10e-07,117|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,2.21160542851358,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0.871533458600294,5.69846049737725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768834895534206,0,0.804269605718038,0,0,0,0,1.55776328755086,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.73886140225013,0,0,0.647747748306418,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,2.20368642781448,2.7881490806424,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33900880540533,0,0,0,15.4382296192915,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0,0.159296767163702,0,0.465788870628778,0,0,0,0.150257608997218,0,0.406870733204662,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr7:27163592..27163605,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4086 | |||
|description=CAGE_peak_at_chr7:27163592..27163605,- | |||
|id=chr7:27163592..27163605,- | |||
|ontology_enrichment_celltype=CL:0002539!8.15e-17!10;CL:1000449!6.45e-10!16;CL:1000507!1.71e-09!12;CL:1000494!1.71e-09!12;CL:1000497!9.57e-09!18;CL:0002518!9.57e-09!18;CL:0002681!1.02e-08!13;CL:0002584!1.02e-08!13;CL:0000359!1.87e-08!32;CL:0000192!9.88e-08!42;CL:0000514!9.88e-08!42;CL:0000183!1.18e-07!59;CL:0000322!1.62e-07!3;CL:0002579!2.68e-07!3;CL:0000650!2.94e-07!3;CL:1000618!2.94e-07!3;CL:1001318!2.94e-07!3;CL:0002173!2.94e-07!3;CL:1000500!2.94e-07!3;CL:0002582!4.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;7.02e-25;3!CL:0002595;1.05e-15;5!CL:0002593;1.57e-10;2!CL:0000650;2.99e-10;2!CL:1000500;2.99e-10;2!CL:1000618;2.99e-10;2!CL:1001318;2.99e-10;2!CL:0002173;2.99e-10;2!CL:0000359;1.09e-09;32!CL:0002202;5.87e-09;9!CL:0002632;5.87e-09;9!CL:0002539;3.25e-08;10!CL:0002582;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.93e-25,3;CL:0002595,1.05e-15,5;CL:0002593,1.57e-10,2;CL:0000650,3.58e-10,2;CL:1000500,3.58e-10,2;CL:1000618,3.58e-10,2;CL:1001318,3.58e-10,2;CL:0002173,3.58e-10,2;CL:0000359,1.76e-09,32;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002539,3.25e-08,10;CL:0002582,2.63e-07,3;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.36e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.99e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.27e-10,2 | |||
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|short_description=p@chr7:27163592..27163605,- | |||
}} |
Revision as of 00:43, 14 September 2013
Short description: | p@chr7:27163592..27163605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:27163592..27163605, - |
Coexpression cluster: | C4086_Smooth_Mesothelial_seminal_Fibroblast_Alveolar_Melanocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.93e-25 | 3 |
smooth muscle cell of the subclavian artery | 1.05e-15 | 5 |
smooth muscle cell of the internal thoracic artery | 1.57e-10 | 2 |
mesangial cell | 3.58e-10 | 2 |
kidney interstitial cell | 3.58e-10 | 2 |
juxtaglomerular complex cell | 3.58e-10 | 2 |
renal interstitial pericyte | 3.58e-10 | 2 |
extraglomerular mesangial cell | 3.58e-10 | 2 |
vascular associated smooth muscle cell | 1.76e-09 | 32 |
epithelial cell of tracheobronchial tree | 6.11e-09 | 9 |
epithelial cell of lower respiratory tract | 6.11e-09 | 9 |
aortic smooth muscle cell | 3.25e-08 | 10 |
visceral preadipocyte | 2.63e-07 | 3 |
smooth muscle cell | 4.02e-07 | 43 |
smooth muscle myoblast | 4.02e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.27e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.