FFCP PHASE1:Hg19::chr7:142511059..142511075,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12214|TSSclassifier=S|UniProt=A0A5C0|association_with_transcript=8bp_to_ENST00000417977,uc003wbp.2_5end|coexpression_cluster_id=C205|description=CAGE_peak_2_at_TRBV30_5end|id=chr7:142511059..142511075,-|ontology_enrichment_celltype=CL:0000084!7.55e-29!25;CL:0000827!7.55e-29!25;CL:0000791!2.56e-28!18;CL:0000789!2.56e-28!18;CL:0002420!2.56e-28!18;CL:0002419!2.56e-28!18;CL:0000790!2.56e-28!18;CL:0000625!2.17e-20!11;CL:0000838!1.15e-18!52;CL:0000542!3.73e-18!53;CL:0000051!3.73e-18!53;CL:0000080!1.27e-11!6;CL:0000624!1.52e-11!6;CL:0002087!2.07e-09!119;CL:0000738!1.68e-08!140;CL:0000988!1.86e-07!182|ontology_enrichment_celltype_v019=CL:0000791;1.28e-51;18!CL:0000789;1.28e-51;18!CL:0002419;1.28e-51;18!CL:0000084;3.57e-41;25!CL:0000625;7.35e-41;11!CL:0000624;5.21e-16;6!CL:0000542;5.37e-11;53|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-51,18;CL:0000789,1.24e-51,18;CL:0002420,1.24e-51,18;CL:0002419,1.24e-51,18;CL:0000790,1.24e-51,18;CL:0000084,3.49e-41,25;CL:0000827,3.49e-41,25;CL:0000625,7.51e-41,11;CL:0000838,7.42e-20,52;CL:0000542,2.13e-19,53;CL:0000051,2.13e-19,53;CL:0000624,4.97e-16,6;CL:0002087,1.92e-08,115;CL:0000738,2.74e-07,136;CL:0000988,9.09e-07,177|ontology_enrichment_development_v019=CL:0000790;1.28e-51;18!CL:0000051;5.37e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.61e-22!15;UBERON:0000179!2.61e-22!15;UBERON:0000463!2.61e-22!15|ontology_enrichment_uberon_v019=UBERON:0000178;9.84e-34;15!UBERON:0000179;9.84e-34;15!UBERON:0000463;9.84e-34;15!UBERON:0002390;1.50e-18;32!UBERON:0002193;2.59e-11;42!UBERON:0002370;4.72e-09;2!UBERON:0005058;4.72e-09;2!UBERON:0009113;4.72e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.19e-34,15;UBERON:0000179,7.19e-34,15;UBERON:0000463,7.19e-34,15;UBERON:0002370,1.27e-09,4;UBERON:0005058,1.27e-09,4;UBERON:0009113,1.27e-09,4;UBERON:0003295,1.27e-09,4;UBERON:0005562,1.27e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,3.14735632182133,5.50215067848831,5.55124047298675,2.17342444007882,0.977766799900771,2.8406868344084,0,3.34231370655521,4.71369451959739,7.3106185212595,5.41607727530031,5.37983542847836,3.38154303655683,14.4705356051235,17.1337011027226,7.24507714337631,6.67289534229272,8.02622484269139,9.40819714244791,5.09892042139048,7.2811893784365,11.3397057009268,8.09663014462409,11.7869203299916,11.0684187155591,7.60361635558699,6.17357988218868,7.42322344695627,2.49861453104692,9.47109008176067,7.39015197228942,2.21767417547206,4.01160293675261,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,2.37190332345469,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.431428401637234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,4.58782324285425,3.41788312304498,2.85878130549347,4.11362273086194,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,1.93398740871803,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,18.9773522355598,54.9859528311938,58.1630258745386,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0.548167698587004,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12214 | |||
|TSSclassifier=S | |||
|UniProt=A0A5C0 | |||
|association_with_transcript=8bp_to_ENST00000417977,uc003wbp.2_5end | |||
|coexpression_cluster_id=C205 | |||
|description=CAGE_peak_2_at_TRBV30_5end | |||
|id=chr7:142511059..142511075,- | |||
|ontology_enrichment_celltype=CL:0000084!7.55e-29!25;CL:0000827!7.55e-29!25;CL:0000791!2.56e-28!18;CL:0000789!2.56e-28!18;CL:0002420!2.56e-28!18;CL:0002419!2.56e-28!18;CL:0000790!2.56e-28!18;CL:0000625!2.17e-20!11;CL:0000838!1.15e-18!52;CL:0000542!3.73e-18!53;CL:0000051!3.73e-18!53;CL:0000080!1.27e-11!6;CL:0000624!1.52e-11!6;CL:0002087!2.07e-09!119;CL:0000738!1.68e-08!140;CL:0000988!1.86e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.28e-51;18!CL:0000789;1.28e-51;18!CL:0002419;1.28e-51;18!CL:0000084;3.57e-41;25!CL:0000625;7.35e-41;11!CL:0000624;5.21e-16;6!CL:0000542;5.37e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-51,18;CL:0000789,1.24e-51,18;CL:0002420,1.24e-51,18;CL:0002419,1.24e-51,18;CL:0000790,1.24e-51,18;CL:0000084,3.49e-41,25;CL:0000827,3.49e-41,25;CL:0000625,7.51e-41,11;CL:0000838,7.42e-20,52;CL:0000542,2.13e-19,53;CL:0000051,2.13e-19,53;CL:0000624,4.97e-16,6;CL:0002087,1.92e-08,115;CL:0000738,2.74e-07,136;CL:0000988,9.09e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-51;18!CL:0000051;5.37e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.61e-22!15;UBERON:0000179!2.61e-22!15;UBERON:0000463!2.61e-22!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.84e-34;15!UBERON:0000179;9.84e-34;15!UBERON:0000463;9.84e-34;15!UBERON:0002390;1.50e-18;32!UBERON:0002193;2.59e-11;42!UBERON:0002370;4.72e-09;2!UBERON:0005058;4.72e-09;2!UBERON:0009113;4.72e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.19e-34,15;UBERON:0000179,7.19e-34,15;UBERON:0000463,7.19e-34,15;UBERON:0002370,1.27e-09,4;UBERON:0005058,1.27e-09,4;UBERON:0009113,1.27e-09,4;UBERON:0003295,1.27e-09,4;UBERON:0005562,1.27e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,3.14735632182133,5.50215067848831,5.55124047298675,2.17342444007882,0.977766799900771,2.8406868344084,0,3.34231370655521,4.71369451959739,7.3106185212595,5.41607727530031,5.37983542847836,3.38154303655683,14.4705356051235,17.1337011027226,7.24507714337631,6.67289534229272,8.02622484269139,9.40819714244791,5.09892042139048,7.2811893784365,11.3397057009268,8.09663014462409,11.7869203299916,11.0684187155591,7.60361635558699,6.17357988218868,7.42322344695627,2.49861453104692,9.47109008176067,7.39015197228942,2.21767417547206,4.01160293675261,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,2.37190332345469,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.431428401637234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,4.58782324285425,3.41788312304498,2.85878130549347,4.11362273086194,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,1.93398740871803,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,18.9773522355598,54.9859528311938,58.1630258745386,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0.548167698587004,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.7939626145114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,7.04019117212467,7.44896571550295,0,0,0,0,0,1.48174516632093,0.286888821570705,0,0,0,0,0,0,0,0,0,2.21401172950129,0 | |||
|short_description=p2@TRBV30 | |||
}} |
Revision as of 23:42, 13 September 2013
Short description: | p2@TRBV30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRBV30_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | 8bp_to_ENST00000417977, uc003wbp.2_5end |
EntrezGene: | NA |
HGNC: | 12214 |
UniProt: | A0A5C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.24e-51 | 18 |
alpha-beta T cell | 1.24e-51 | 18 |
immature T cell | 1.24e-51 | 18 |
mature T cell | 1.24e-51 | 18 |
immature alpha-beta T cell | 1.24e-51 | 18 |
T cell | 3.49e-41 | 25 |
pro-T cell | 3.49e-41 | 25 |
CD8-positive, alpha-beta T cell | 7.51e-41 | 11 |
lymphoid lineage restricted progenitor cell | 7.42e-20 | 52 |
lymphocyte | 2.13e-19 | 53 |
common lymphoid progenitor | 2.13e-19 | 53 |
CD4-positive, alpha-beta T cell | 4.97e-16 | 6 |
nongranular leukocyte | 1.92e-08 | 115 |
leukocyte | 2.74e-07 | 136 |
hematopoietic cell | 9.09e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 7.19e-34 | 15 |
haemolymphatic fluid | 7.19e-34 | 15 |
organism substance | 7.19e-34 | 15 |
thymus | 1.27e-09 | 4 |
hemolymphoid system gland | 1.27e-09 | 4 |
thymic region | 1.27e-09 | 4 |
pharyngeal gland | 1.27e-09 | 4 |
thymus primordium | 1.27e-09 | 4 |
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