FFCP PHASE1:Hg19::chr9:77230443..77230455,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6096|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10259|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_uc004aji.2_5end|coexpression_cluster_id=C40|description=CAGE_peak_6_at_RORB_5end|id=chr9:77230443..77230455,+|ontology_enrichment_celltype=CL:0000306!2.61e-08!4;CL:0002222!2.61e-08!4;CL:0002224!2.61e-08!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3|ontology_enrichment_disease=DOID:5409!2.43e-08!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!2.69e-57!2;UBERON:0002757!2.69e-57!2;UBERON:0010134!2.69e-57!2;UBERON:0002784!2.69e-57!2;UBERON:0005408!2.69e-57!2;UBERON:0001899!2.69e-57!2;UBERON:0003296!2.74e-29!4;UBERON:0010133!2.74e-29!4;UBERON:0000966!1.44e-23!5;UBERON:0005388!1.44e-23!5;UBERON:0001802!1.44e-23!5;UBERON:0000970!4.44e-23!20;UBERON:0002104!5.19e-22!21;UBERON:0000020!3.75e-20!23;UBERON:0001032!2.44e-19!24;UBERON:0004456!2.44e-19!24;UBERON:0001894!3.15e-17!7;UBERON:0006222!3.15e-17!7;UBERON:0000019!4.53e-14!19;UBERON:0000047!4.53e-14!19;UBERON:0004088!4.53e-14!19;UBERON:0003072!4.53e-14!19;UBERON:0003071!4.53e-14!19;UBERON:0004128!4.53e-14!19;UBERON:0001456!8.39e-13!21;UBERON:0003056!9.55e-12!61;UBERON:0005085!1.81e-09!29;UBERON:0003075!1.87e-08!86;UBERON:0007284!1.87e-08!86;UBERON:0010077!2.61e-08!4;UBERON:0005389!2.61e-08!4;UBERON:0000484!2.61e-08!4;UBERON:0002546!2.61e-08!4;UBERON:0000965!2.61e-08!4;UBERON:0001803!2.61e-08!4;UBERON:0003073!2.61e-08!4;UBERON:0005426!2.61e-08!4;UBERON:0002346!4.28e-08!90|ontology_enrichment_uberon_v019=UBERON:0001905;2.56e-98;2!UBERON:0002757;2.56e-98;2!UBERON:0010134;2.56e-98;2!UBERON:0005408;2.56e-98;2!UBERON:0001899;2.56e-98;2!UBERON:0003296;6.60e-50;4!UBERON:0010133;6.60e-50;4!UBERON:0002784;6.60e-50;4!UBERON:0001894;4.21e-29;7!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0000970;5.42e-11;20!UBERON:0002104;1.61e-10;21!UBERON:0000020;1.07e-09;23!UBERON:0001032;2.45e-09;24!UBERON:0004456;2.45e-09;24|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.56e-98,2;UBERON:0002757,2.56e-98,2;UBERON:0010134,2.56e-98,2;UBERON:0005408,2.56e-98,2;UBERON:0001899,2.56e-98,2;UBERON:0003296,6.60e-50,4;UBERON:0010133,6.60e-50,4;UBERON:0002784,6.60e-50,4;UBERON:0001894,4.21e-29,7;UBERON:0006222,4.21e-29,7;UBERON:0000970,1.61e-10,21;UBERON:0002104,1.61e-10,21;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.45e-09,24;UBERON:0001032,2.45e-09,24;UBERON:0004456,2.45e-09,24;UBERON:0003056,4.61e-08,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3666903730762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,9.75222794434589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64664698995585,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@RORB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10259 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_uc004aji.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_6_at_RORB_5end | |||
|id=chr9:77230443..77230455,+ | |||
|ontology_enrichment_celltype=CL:0000306!2.61e-08!4;CL:0002222!2.61e-08!4;CL:0002224!2.61e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3 | |||
|ontology_enrichment_disease=DOID:5409!2.43e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.69e-57!2;UBERON:0002757!2.69e-57!2;UBERON:0010134!2.69e-57!2;UBERON:0002784!2.69e-57!2;UBERON:0005408!2.69e-57!2;UBERON:0001899!2.69e-57!2;UBERON:0003296!2.74e-29!4;UBERON:0010133!2.74e-29!4;UBERON:0000966!1.44e-23!5;UBERON:0005388!1.44e-23!5;UBERON:0001802!1.44e-23!5;UBERON:0000970!4.44e-23!20;UBERON:0002104!5.19e-22!21;UBERON:0000020!3.75e-20!23;UBERON:0001032!2.44e-19!24;UBERON:0004456!2.44e-19!24;UBERON:0001894!3.15e-17!7;UBERON:0006222!3.15e-17!7;UBERON:0000019!4.53e-14!19;UBERON:0000047!4.53e-14!19;UBERON:0004088!4.53e-14!19;UBERON:0003072!4.53e-14!19;UBERON:0003071!4.53e-14!19;UBERON:0004128!4.53e-14!19;UBERON:0001456!8.39e-13!21;UBERON:0003056!9.55e-12!61;UBERON:0005085!1.81e-09!29;UBERON:0003075!1.87e-08!86;UBERON:0007284!1.87e-08!86;UBERON:0010077!2.61e-08!4;UBERON:0005389!2.61e-08!4;UBERON:0000484!2.61e-08!4;UBERON:0002546!2.61e-08!4;UBERON:0000965!2.61e-08!4;UBERON:0001803!2.61e-08!4;UBERON:0003073!2.61e-08!4;UBERON:0005426!2.61e-08!4;UBERON:0002346!4.28e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.56e-98;2!UBERON:0002757;2.56e-98;2!UBERON:0010134;2.56e-98;2!UBERON:0005408;2.56e-98;2!UBERON:0001899;2.56e-98;2!UBERON:0003296;6.60e-50;4!UBERON:0010133;6.60e-50;4!UBERON:0002784;6.60e-50;4!UBERON:0001894;4.21e-29;7!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0000970;5.42e-11;20!UBERON:0002104;1.61e-10;21!UBERON:0000020;1.07e-09;23!UBERON:0001032;2.45e-09;24!UBERON:0004456;2.45e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.56e-98,2;UBERON:0002757,2.56e-98,2;UBERON:0010134,2.56e-98,2;UBERON:0005408,2.56e-98,2;UBERON:0001899,2.56e-98,2;UBERON:0003296,6.60e-50,4;UBERON:0010133,6.60e-50,4;UBERON:0002784,6.60e-50,4;UBERON:0001894,4.21e-29,7;UBERON:0006222,4.21e-29,7;UBERON:0000970,1.61e-10,21;UBERON:0002104,1.61e-10,21;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.45e-09,24;UBERON:0001032,2.45e-09,24;UBERON:0004456,2.45e-09,24;UBERON:0003056,4.61e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3666903730762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,9.75222794434589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64664698995585,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RORB | |||
}} |
Revision as of 09:25, 14 September 2013
Short description: | p6@RORB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RORB_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -11bp_to_uc004aji.2_5end |
EntrezGene: | RORB |
HGNC: | 10259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.56e-98 | 2 |
regional part of epithalamus | 2.56e-98 | 2 |
secretory circumventricular organ | 2.56e-98 | 2 |
circumventricular organ | 2.56e-98 | 2 |
epithalamus | 2.56e-98 | 2 |
gland of diencephalon | 6.60e-50 | 4 |
neuroendocrine gland | 6.60e-50 | 4 |
regional part of diencephalon | 6.60e-50 | 4 |
diencephalon | 4.21e-29 | 7 |
future diencephalon | 4.21e-29 | 7 |
eye | 1.61e-10 | 21 |
visual system | 1.61e-10 | 21 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
sense organ | 2.45e-09 | 24 |
sensory system | 2.45e-09 | 24 |
entire sense organ system | 2.45e-09 | 24 |
pre-chordal neural plate | 4.61e-08 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.