FFCP PHASE1:Hg19::chr11:63655987..63656083,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3332 | |||
|TSSclassifier=strong | |||
|UniProt=A8K2S4,Q7KZI7 | |||
|association_with_transcript=0bp_to_ENST00000509502,NM_017490,uc001nxz.3,uc009yox.2_5end | |||
|description=CAGE_peak_2_at_MARK2_5end | |||
|id=chr11:63655987..63656083,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-11!254;CL:0000223!3.93e-11!59;CL:0002076!4.09e-11!43;CL:0000791!8.20e-08!18;CL:0000789!8.20e-08!18;CL:0002420!8.20e-08!18;CL:0002419!8.20e-08!18;CL:0000790!8.20e-08!18;CL:0000542!2.31e-07!53;CL:0000051!2.31e-07!53;CL:0000084!2.92e-07!25;CL:0000827!2.92e-07!25;CL:0000838!4.66e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.15e-11;42!CL:0000791;2.37e-09;18!CL:0000789;2.37e-09;18!CL:0002419;2.37e-09;18!CL:0000084;2.56e-08;25!CL:0002368;2.85e-08;13!CL:0002251;6.44e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.13e-14,253;CL:0002076,4.82e-14,42;CL:0000223,1.06e-13,58;CL:0000791,2.43e-09,18;CL:0000789,2.43e-09,18;CL:0002420,2.43e-09,18;CL:0002419,2.43e-09,18;CL:0000790,2.43e-09,18;CL:0000542,2.02e-08,53;CL:0000051,2.02e-08,53;CL:0000084,2.42e-08,25;CL:0000827,2.42e-08,25;CL:0002368,2.88e-08,13;CL:0000838,4.73e-08,52;CL:0002251,8.11e-08,20;CL:0000625,9.16e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.37e-09;18!CL:0000223;8.56e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.74e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.51e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.50e-13!169;UBERON:0000925!2.50e-13!169;UBERON:0006595!2.50e-13!169;UBERON:0001007!2.47e-10!155;UBERON:0001555!2.47e-10!155;UBERON:0007026!2.47e-10!155;UBERON:0004921!4.63e-10!129;UBERON:0004185!4.63e-10!129;UBERON:0001004!1.67e-09!72;UBERON:0005911!1.57e-08!82;UBERON:0000077!1.58e-08!130;UBERON:0000065!6.22e-08!53;UBERON:0001041!8.01e-08!98 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.45e-16,160;UBERON:0000925,7.45e-16,160;UBERON:0006595,7.45e-16,160;UBERON:0001007,2.63e-12,145;UBERON:0001555,2.63e-12,145;UBERON:0007026,2.63e-12,145;UBERON:0004921,1.48e-11,118;UBERON:0005911,2.00e-10,82;UBERON:0001041,3.96e-09,87;UBERON:0001004,9.90e-09,74;UBERON:0000065,1.79e-07,54;UBERON:0004807,6.54e-07,28 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,3.93174298402414,17.4450291993107,15.9462201655026,7.3854753903967,0.990130823680373,0.331397375727916,0,0.602694528023977,0,0,0,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,1.57345710739562,3.0706351847777,0.464448369948228,10.1136334692682,19.8795906393645,17.0086844676722,0.232401601740905,0,0,0,0.401088894940283,0.651032612147555,0.671746422719773,0.971680998056939,0.515151135268373,0.872389432677388,0.377875943688809,1.94067248950253,0,0,0,0.28769239232215,0,0,0,0,0,0.941211697713023,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,1.12328631146495,0.600707571366025,0,0.570025487482497,0.19891667719909,0.547992461293902,3.51992488922645,2.73069305631066,1.77901850772711,5.12076267079809,4.00395987036012,3.4485146397269,3.96626923670917,3.81621501814146,1.70763890732835,1.17447437874188,1.91136614062614,2.64342657158052,0.560508562981536,0.263384084775077,4.13090517239049,2.35806457649499,3.49522548299166,15.5483440713331,4.23698946623668,5.6813736688168,0,11.8095084298284,5.30290633454707,5.53834736459053,7.58250818542044,16.1395062854351,11.9654599755088,7.07082989795807,11.6067007470056,11.5921234294021,6.52460877913066,5.88589821797369,8.36284190439814,12.5773370394298,5.3650869104269,4.81078423675682,4.80737414837055,7.64556994377832,9.76625180784628,5.70271226669025,8.58278178743305,10.2389288923535,7.49584359314075,9.47109008176067,6.56902397536837,2.01606743224732,2.94184215361858,2.46201486600758,0,0,0.255725123687061,0.361439152384566,1.50401373190767,0,0,0,0,0,0,0.458426764241994,14.2075162434091,7.41568885568859,10.0609692032952,15.3234168823355,7.44564578905645,1.19245312152671,0.571994910780128,1.48583000531826,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,8.72188104285069,0,0.633152558322899,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0,0.653847612453835,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,1.82032272387605,0,0.168336113954066,0,0.277064115484183,0,0,0,0.340296549480063,0,0.213557388818567,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0,0,0,0.169560592310488,11.5956511897978,11.4553370648151,12.6194021971162,1.21973706129595,0.530119073285941,2.09149097165133,0.725627385107593,0.504641701751257,1.09493207722749,0,0,0,0,0,0.828147600278907,1.68584690078102,1.20505514941741,1.54411561825352,1.30727666455444,0.474541238222193,0.943819157121151,0.784885860501384,2.30848294167834,0,0,0.4115740113314,0,3.80265104465493,2.94848165003288,1.18157981336281,1.32438929824395,10.4540172761647,0,17.7795462361973,10.1161577931858,8.84654957222351,7.68484094815796,0,0,0,0,0,0,0,0,3.95102198979638,2.57545848628462,0.492434012174795,8.19014927987332,1.63494278517601,6.56136837907439,9.74296343553385,9.07360622351273,12.3590761329931,8.71901815541886,11.8848630541215,0.492663237895943,0.968532774145487,1.03664057770386,0.576479813667846,1.00993946741104,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0.26593811658487,1.04007436911366,1.54324424557285,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,3.61727252471503,1.74306691720059,0.99972991182057,2.43247561282381,0,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0,0,7.3976195035728,3.34952292343276,2.80315847317372,2.31017465303547,0.508189248444927,0,0,0,0,5.99205619157746,14.9580729602012,18.6486981046216,0.981531933753119,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,1.32845119707087,0,0.260650843404249,0,0.343143423810856,3.72182447021197,1.94142780736755,3.73546452312055,5.45629628603267,0,5.44302527993425,0,0.61384789315225,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.771048469013278,0.532685175939381,0.410635780069046,1.03850885836724,0.116210378459959,9.54789651773816,9.2232976339511,8.65561295997425,0.229628896329213,0.728364672026868,0.262248829918848,8.12159303233341,5.77615028283111,7.0591479225917,2.92278449306521,2.74434235121477,0,0.170093705276516,0.215915916102139,0,2.43851793789468,1.50506932156456,7.64628819135115,9.14183609821597,4.70136984916574,0.657779629937804,1.0457418040996,0.256450125116389,0.656029291399411,0.325378394664303,1.44257416306811,0.0915694648183434,0,13.208107373912,5.20048196829217,0,0.096670718292122,0.462145851343933,0.307007349452259,0.275673144969061,0.751941714077915,0.290033387828457,0.0852266274161009,0.178064071293475,8.42953068340988,7.30322255987403,14.8030746493718,6.4740979747552,0.929691098594572,0.31481234683064,0,1.23213432070436,0.532306030317022,1.73986598415015,0,0.143124886741991,0.372158369359667,0,0.190630193923825,1.535386747868,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,3.17020642346017,0.421258456238981,0.48763373908959,0.243713489631284,0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| |||
|short_description=p2@MARK2 | |||
}} |
Revision as of 08:19, 11 January 2014
Short description: | p2@MARK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509502, NM_017490, uc001nxz.3, uc009yox.2_5end |
EntrezGene: | MARK2 |
HGNC: | 3332 |
UniProt: | A8K2S4Q7KZI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.13e-14 | 253 |
endo-epithelial cell | 4.82e-14 | 42 |
endodermal cell | 1.06e-13 | 58 |
mature alpha-beta T cell | 2.43e-09 | 18 |
alpha-beta T cell | 2.43e-09 | 18 |
immature T cell | 2.43e-09 | 18 |
mature T cell | 2.43e-09 | 18 |
immature alpha-beta T cell | 2.43e-09 | 18 |
lymphocyte | 2.02e-08 | 53 |
common lymphoid progenitor | 2.02e-08 | 53 |
T cell | 2.42e-08 | 25 |
pro-T cell | 2.42e-08 | 25 |
respiratory epithelial cell | 2.88e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.73e-08 | 52 |
epithelial cell of alimentary canal | 8.11e-08 | 20 |
CD8-positive, alpha-beta T cell | 9.16e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.45e-16 | 160 |
endoderm | 7.45e-16 | 160 |
presumptive endoderm | 7.45e-16 | 160 |
digestive system | 2.63e-12 | 145 |
digestive tract | 2.63e-12 | 145 |
primitive gut | 2.63e-12 | 145 |
subdivision of digestive tract | 1.48e-11 | 118 |
endo-epithelium | 2.00e-10 | 82 |
foregut | 3.96e-09 | 87 |
respiratory system | 9.90e-09 | 74 |
respiratory tract | 1.79e-07 | 54 |
respiratory system epithelium | 6.54e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.51e-09 | 106 |