FFCP PHASE1:Hg19::chr12:104659072..104659095,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31387 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000462885_5end | |||
|description=CAGE_peak_1_at_RPL18AP3_5end | |||
|id=chr12:104659072..104659095,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.37e-31!682;CL:0000548!4.30e-31!679;CL:0000004!4.30e-31!679;CL:0000255!4.30e-31!679;CL:0000220!1.09e-24!246;CL:0002321!1.11e-24!248;CL:0000144!1.49e-23!625;CL:0000003!1.19e-21!722;CL:0002371!2.06e-19!591;CL:0000066!7.74e-18!254;CL:0000222!8.78e-17!119;CL:0000055!1.84e-12!180;CL:0000393!2.74e-12!60;CL:0000211!2.74e-12!60;CL:0000680!3.78e-12!57;CL:0000056!3.78e-12!57;CL:0000355!3.78e-12!57;CL:0000063!4.42e-12!578;CL:0000192!7.83e-12!42;CL:0000514!7.83e-12!42;CL:0000187!2.57e-11!54;CL:0000183!1.29e-10!59;CL:0000359!1.28e-09!32;CL:0000076!7.22e-08!62;CL:0002077!5.53e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.96e-09;32!CL:0000192;1.99e-08;43!CL:0002077;7.50e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.96e-24,250;CL:0000066,7.17e-18,253;CL:0000222,1.84e-16,121;CL:0000393,4.95e-12,61;CL:0000211,4.95e-12,61;CL:0000680,6.97e-12,58;CL:0000056,6.97e-12,58;CL:0000355,6.97e-12,58;CL:0000192,2.27e-11,43;CL:0000514,2.27e-11,43;CL:0000187,4.69e-11,55;CL:0000359,1.25e-09,32;CL:0000076,4.12e-08,63;CL:0002077,2.39e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-08;43!CL:0000355;6.26e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.61e-12!82;UBERON:0000490!2.52e-11!138;UBERON:0004290!3.08e-11!70;UBERON:0001637!7.43e-11!42;UBERON:0003509!7.43e-11!42;UBERON:0004572!7.43e-11!42;UBERON:0001134!1.07e-10!61;UBERON:0002036!1.07e-10!61;UBERON:0003082!1.07e-10!61;UBERON:0000914!1.37e-10!83;UBERON:0002329!1.37e-10!83;UBERON:0003077!1.37e-10!83;UBERON:0003059!1.37e-10!83;UBERON:0007282!1.37e-10!83;UBERON:0009618!1.37e-10!83;UBERON:0007285!1.37e-10!83;UBERON:0005256!3.65e-10!143;UBERON:0003104!8.20e-10!238;UBERON:0009142!8.20e-10!238;UBERON:0002049!1.19e-09!79;UBERON:0007798!1.19e-09!79;UBERON:0002385!1.29e-09!63;UBERON:0001015!1.29e-09!63;UBERON:0000383!1.29e-09!63;UBERON:0001981!1.67e-09!60;UBERON:0007500!1.67e-09!60;UBERON:0004537!1.67e-09!60;UBERON:0006965!1.67e-09!60;UBERON:0000055!3.22e-09!69;UBERON:0002100!7.97e-09!216;UBERON:0004573!5.57e-08!33;UBERON:0004571!5.57e-08!33;UBERON:0004872!1.51e-07!84;UBERON:0001737!3.25e-07!9;UBERON:0003914!4.76e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.81e-08;42!UBERON:0003509;7.81e-08;42!UBERON:0004572;7.81e-08;42!UBERON:0007500;1.75e-07;56!UBERON:0001981;1.75e-07;56!UBERON:0004537;1.75e-07;56!UBERON:0001737;2.80e-07;9!UBERON:0001557;2.80e-07;9!UBERON:0004573;2.97e-07;33!UBERON:0004571;2.97e-07;33!UBERON:0003914;8.69e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.28e-12,83;UBERON:0007503,5.48e-12,78;UBERON:0000490,6.31e-12,148;UBERON:0002329,4.44e-11,71;UBERON:0003059,4.44e-11,71;UBERON:0007282,4.44e-11,71;UBERON:0004290,4.44e-11,71;UBERON:0009618,4.44e-11,71;UBERON:0001637,7.95e-11,42;UBERON:0003509,7.95e-11,42;UBERON:0004572,7.95e-11,42;UBERON:0003077,1.22e-10,72;UBERON:0007285,1.22e-10,72;UBERON:0001134,1.60e-10,62;UBERON:0002036,1.60e-10,62;UBERON:0003082,1.60e-10,62;UBERON:0007524,1.66e-10,73;UBERON:0002049,3.39e-10,78;UBERON:0007798,3.39e-10,78;UBERON:0007500,3.87e-10,59;UBERON:0001981,3.87e-10,59;UBERON:0004537,3.87e-10,59;UBERON:0006965,3.87e-10,59;UBERON:0000055,8.61e-10,68;UBERON:0002385,1.82e-09,64;UBERON:0001015,1.82e-09,64;UBERON:0000383,1.82e-09,64;UBERON:0002100,2.43e-09,199;UBERON:0005256,3.97e-09,122;UBERON:0004872,5.07e-08,83;UBERON:0004573,5.97e-08,33;UBERON:0004571,5.97e-08,33;UBERON:0003104,1.08e-07,160;UBERON:0009142,1.08e-07,160;UBERON:0001737,3.20e-07,9;UBERON:0003914,3.41e-07,117 | |||
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| |||
|short_description=p1@RPL18AP3 | |||
}} |
Revision as of 15:35, 11 January 2014
Short description: | p1@RPL18AP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPL18AP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462885_5end |
EntrezGene: | NA |
HGNC: | 31387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.96e-24 | 250 |
epithelial cell | 7.17e-18 | 253 |
mesodermal cell | 1.84e-16 | 121 |
electrically responsive cell | 4.95e-12 | 61 |
electrically active cell | 4.95e-12 | 61 |
muscle precursor cell | 6.97e-12 | 58 |
myoblast | 6.97e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.97e-12 | 58 |
smooth muscle cell | 2.27e-11 | 43 |
smooth muscle myoblast | 2.27e-11 | 43 |
muscle cell | 4.69e-11 | 55 |
vascular associated smooth muscle cell | 1.25e-09 | 32 |
squamous epithelial cell | 4.12e-08 | 63 |
ecto-epithelial cell | 2.39e-07 | 34 |