FFCP PHASE1:Hg19::chr12:65515322..65515326,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11197 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18081 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5W5 | |||
|association_with_transcript=19bp_to_ENST00000286574,NM_007191_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_8_at_WIF1_5end | |||
|id=chr12:65515322..65515326,- | |||
|ontology_enrichment_celltype=CL:0002551!1.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002583;2.60e-10;2!CL:0000153;3.77e-09;9!CL:0000447;3.77e-09;9!CL:0000062;6.10e-09;9!CL:0000214;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,2.27e-10,2;CL:0000153,3.77e-09,9;CL:0000447,3.77e-09,9;CL:0000214,1.93e-07,3;CL:0000062,2.10e-07,11;CL:0000375,2.10e-07,11;CL:0000335,2.10e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.78e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.94e-20;1!DOID:4549;8.94e-20;1!DOID:5861;8.94e-20;1!DOID:6496;8.94e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.95e-20,1;DOID:4549,8.95e-20,1;DOID:5861,8.95e-20,1;DOID:6496,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-22!115;UBERON:0001893!1.49e-21!34;UBERON:0002020!1.61e-21!34;UBERON:0003528!1.61e-21!34;UBERON:0002780!2.34e-21!41;UBERON:0001890!2.34e-21!41;UBERON:0006240!2.34e-21!41;UBERON:0003080!1.00e-20!42;UBERON:0001869!1.03e-20!32;UBERON:0002791!7.80e-20!33;UBERON:0002619!9.34e-19!22;UBERON:0001950!4.85e-18!20;UBERON:0001049!4.66e-17!57;UBERON:0005068!4.66e-17!57;UBERON:0006241!4.66e-17!57;UBERON:0007135!4.66e-17!57;UBERON:0005743!2.14e-16!86;UBERON:0002616!2.78e-16!59;UBERON:0000956!3.53e-16!25;UBERON:0000203!3.53e-16!25;UBERON:0001017!4.71e-16!82;UBERON:0003056!3.60e-14!61;UBERON:0000073!3.66e-14!94;UBERON:0001016!3.66e-14!94;UBERON:0000955!3.79e-14!69;UBERON:0006238!3.79e-14!69;UBERON:0003075!1.09e-12!86;UBERON:0007284!1.09e-12!86;UBERON:0002346!7.74e-12!90;UBERON:0000200!9.31e-11!6;UBERON:0000153!2.97e-10!129;UBERON:0007811!2.97e-10!129;UBERON:0000033!3.02e-09!123;UBERON:0002771!2.30e-08!3;UBERON:0001871!5.44e-08!7;UBERON:0002420!7.23e-07!9;UBERON:0007245!7.23e-07!9;UBERON:0010009!7.23e-07!9;UBERON:0010011!7.23e-07!9;UBERON:0000454!7.23e-07!9;UBERON:0002308!8.57e-07!9;UBERON:0000125!8.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.30e-19;1!UBERON:0006518;1.30e-19;1!UBERON:0008949;1.30e-19;1!UBERON:0000101;1.30e-19;1!UBERON:0002167;1.30e-19;1!UBERON:0001474;1.07e-09;18!UBERON:0002048;5.13e-08;22!UBERON:0000117;5.13e-08;22!UBERON:0000171;5.13e-08;22!UBERON:0000170;5.13e-08;22!UBERON:0001434;9.22e-08;36!UBERON:0002418;1.82e-07;3!UBERON:0004755;1.82e-07;3!UBERON:0006915;1.93e-07;3!UBERON:0007616;1.93e-07;3!UBERON:0002217;1.93e-07;3!UBERON:0002018;1.93e-07;3!UBERON:0004765;6.97e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.30e-19,1;UBERON:0006518,1.30e-19,1;UBERON:0008949,1.30e-19,1;UBERON:0000101,1.30e-19,1;UBERON:0002167,1.30e-19,1;UBERON:0002048,4.89e-08,22;UBERON:0000117,4.89e-08,22;UBERON:0000171,4.89e-08,22;UBERON:0000170,4.89e-08,22;UBERON:0005597,4.89e-08,22;UBERON:0000118,4.89e-08,22;UBERON:0002418,1.82e-07,3;UBERON:0004755,1.82e-07,3;UBERON:0006915,1.93e-07,3;UBERON:0007616,1.93e-07,3;UBERON:0002217,1.93e-07,3;UBERON:0002018,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0.587172493218824,0.485618833104395,0.561803226808994,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,1.09883357782012,1.32015199872941,0,0,0,0.870036464629098,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,14.297492524023,1.80784592624426,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.550157746388935,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0,0,0.320362237703084,1.57204305099666,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.615349092722265,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.460409414939944,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0.500335809236594,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0,0,0.437119121007915,0,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0.143339583151451,3.62874593044325,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0.665320713092027,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p8@WIF1 | |||
}} |
Revision as of 14:25, 11 January 2014
Short description: | p8@WIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_WIF1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 19bp_to_ENST00000286574, NM_007191_5end |
EntrezGene: | WIF1 |
HGNC: | 18081 |
UniProt: | Q9Y5W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 2.27e-10 | 2 |
GAG secreting cell | 3.77e-09 | 9 |
carbohydrate secreting cell | 3.77e-09 | 9 |
synovial cell | 1.93e-07 | 3 |
osteoblast | 2.10e-07 | 11 |
osteoprogenitor cell | 2.10e-07 | 11 |
mesenchyme condensation cell | 2.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.30e-19 | 1 |
right lung lobe | 1.30e-19 | 1 |
lower lobe of lung | 1.30e-19 | 1 |
lobe of lung | 1.30e-19 | 1 |
right lung | 1.30e-19 | 1 |
lung | 4.89e-08 | 22 |
respiratory tube | 4.89e-08 | 22 |
respiration organ | 4.89e-08 | 22 |
pair of lungs | 4.89e-08 | 22 |
lung primordium | 4.89e-08 | 22 |
lung bud | 4.89e-08 | 22 |
cartilage tissue | 1.82e-07 | 3 |
skeletal tissue | 1.82e-07 | 3 |
stratified squamous epithelium | 1.93e-07 | 3 |
layer of synovial tissue | 1.93e-07 | 3 |
synovial joint | 1.93e-07 | 3 |
synovial membrane of synovial joint | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.95e-20 | 1 |
extraosseous chondrosarcoma | 8.95e-20 | 1 |
myxoid chondrosarcoma | 8.95e-20 | 1 |
extraskeletal myxoid chondrosarcoma | 8.95e-20 | 1 |