FFCP PHASE1:Hg19::chr13:99628356..99628367,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr13:99628356..99628367,- | |||
|id=chr13:99628356..99628367,- | |||
|ontology_enrichment_celltype=CL:0002139!1.66e-24!24;CL:0000115!1.53e-15!35;CL:0000071!1.39e-14!18;CL:0002546!1.39e-14!18;CL:0005020!1.27e-12!6;CL:0002138!1.27e-12!6;CL:0005022!1.27e-12!6;CL:0002078!1.43e-11!44;CL:0002618!1.47e-09!3;CL:0000213!4.25e-08!57;CL:0000215!4.25e-08!57;CL:0002544!4.25e-08!6;CL:1000413!5.58e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.78e-30;6!CL:0000946;5.16e-21;1!CL:0000786;5.16e-21;1!CL:0002139;1.04e-20;24!CL:0000115;6.76e-13;36!CL:0002078;2.93e-08;45!CL:0002144;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.86e-30,6;CL:0002138,1.86e-30,6;CL:0005022,1.86e-30,6;CL:0000946,3.45e-21,1;CL:0000786,3.45e-21,1;CL:0000980,3.45e-21,1;CL:0002139,9.97e-21,24;CL:0000115,6.90e-14,36;CL:0000785,2.73e-11,2;CL:0000955,2.73e-11,2;CL:0000818,2.73e-11,2;CL:0000954,2.73e-11,2;CL:0000816,2.73e-11,2;CL:0002078,3.87e-11,45;CL:0000213,1.16e-08,58;CL:0000215,1.16e-08,58;CL:0000817,5.93e-08,3;CL:0002144,7.26e-08,3 | |||
|ontology_enrichment_development_v019=CL:0005022;2.78e-30;6!CL:0000954;3.34e-11;2!UBERON:0006965;3.34e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.39e-14!18;UBERON:0004638!1.39e-14!18;UBERON:0004852!1.39e-14!18;UBERON:0000477!1.10e-12!286;UBERON:0002298!7.61e-12!8;UBERON:0000487!1.59e-11!22;UBERON:0004111!4.56e-11!241;UBERON:0000055!1.80e-10!69;UBERON:0006914!7.02e-10!25;UBERON:0000025!8.35e-10!194;UBERON:0001473!2.36e-09!8;UBERON:0004536!2.36e-09!8;UBERON:0006558!2.36e-09!8;UBERON:0007023!5.57e-09!115;UBERON:0003915!5.58e-08!9;UBERON:0004700!5.58e-08!9;UBERON:0001917!5.58e-08!9;UBERON:0002049!1.46e-07!79;UBERON:0007798!1.46e-07!79;UBERON:0002465!2.18e-07!10;UBERON:0004177!7.76e-07!7;UBERON:0001009!8.78e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.99e-41;2!UBERON:0005058;3.99e-41;2!UBERON:0009113;3.99e-41;2!UBERON:0001473;6.42e-23;8!UBERON:0004536;6.42e-23;8!UBERON:0006558;6.42e-23;8!UBERON:0002405;1.30e-18;27!UBERON:0002465;1.73e-18;10!UBERON:0004177;3.95e-17;5!UBERON:0005057;3.95e-17;5!UBERON:0000055;3.91e-09;65!UBERON:0002193;3.33e-08;42!UBERON:0010523;6.78e-08;3!UBERON:0001915;6.78e-08;3!UBERON:0001982;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.76e-23,8;UBERON:0004536,4.76e-23,8;UBERON:0006558,4.76e-23,8;UBERON:0002370,3.82e-21,4;UBERON:0005058,3.82e-21,4;UBERON:0009113,3.82e-21,4;UBERON:0003295,3.82e-21,4;UBERON:0005562,3.82e-21,4;UBERON:0002465,1.36e-18,10;UBERON:0003351,1.90e-14,6;UBERON:0004177,1.59e-12,7;UBERON:0005057,1.59e-12,7;UBERON:0000055,2.18e-10,68;UBERON:0000974,4.75e-09,10;UBERON:0003408,4.75e-09,10;UBERON:0001042,4.75e-09,10;UBERON:0009145,4.75e-09,10;UBERON:0002049,4.85e-09,78;UBERON:0007798,4.85e-09,78;UBERON:0006562,2.62e-08,11;UBERON:0009722,2.62e-08,11;UBERON:0007690,2.62e-08,11;UBERON:0010523,7.26e-08,3;UBERON:0001915,7.26e-08,3;UBERON:0001982,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,0,0,0.417989933073621,1.29208379584664,2.49036383880697,1.67360306382335,1.20848795132744,0,0.732186172644509,0.735326160691737,0,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28055318027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.738508832766417,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0.651884231532048,0,0.366390373607449,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0.704815022316672,0.213574825135389,0.471612915298998,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,10.398814483597,17.6292188600236,0.224263725161227,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |||
|short_description=p@chr13:99628356..99628367,- | |||
}} |
Revision as of 18:24, 11 January 2014
Short description: | p@chr13:99628356..99628367, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99628356..99628367, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.86e-30 | 6 |
endothelial cell of lymphatic vessel | 1.86e-30 | 6 |
vascular lymphangioblast | 1.86e-30 | 6 |
antibody secreting cell | 3.45e-21 | 1 |
plasma cell | 3.45e-21 | 1 |
plasmablast | 3.45e-21 | 1 |
endothelial cell of vascular tree | 9.97e-21 | 24 |
endothelial cell | 6.90e-14 | 36 |
mature B cell | 2.73e-11 | 2 |
pre-B-II cell | 2.73e-11 | 2 |
transitional stage B cell | 2.73e-11 | 2 |
small pre-B-II cell | 2.73e-11 | 2 |
immature B cell | 2.73e-11 | 2 |
meso-epithelial cell | 3.87e-11 | 45 |
lining cell | 1.16e-08 | 58 |
barrier cell | 1.16e-08 | 58 |
precursor B cell | 5.93e-08 | 3 |
capillary endothelial cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.76e-23 | 8 |
lymph vasculature | 4.76e-23 | 8 |
lymphatic part of lymphoid system | 4.76e-23 | 8 |
thymus | 3.82e-21 | 4 |
hemolymphoid system gland | 3.82e-21 | 4 |
thymic region | 3.82e-21 | 4 |
pharyngeal gland | 3.82e-21 | 4 |
thymus primordium | 3.82e-21 | 4 |
lymphoid system | 1.36e-18 | 10 |
pharyngeal epithelium | 1.90e-14 | 6 |
hemopoietic organ | 1.59e-12 | 7 |
immune organ | 1.59e-12 | 7 |
vessel | 2.18e-10 | 68 |
neck | 4.75e-09 | 10 |
gland of gut | 4.75e-09 | 10 |
chordate pharynx | 4.75e-09 | 10 |
pharyngeal region of foregut | 4.75e-09 | 10 |
vasculature | 4.85e-09 | 78 |
vascular system | 4.85e-09 | 78 |
pharynx | 2.62e-08 | 11 |
entire pharyngeal arch endoderm | 2.62e-08 | 11 |
early pharyngeal endoderm | 2.62e-08 | 11 |
microcirculatory vessel | 7.26e-08 | 3 |
endothelium of capillary | 7.26e-08 | 3 |
capillary | 7.26e-08 | 3 |