FFCP PHASE1:Hg19::chr14:85880761..85880773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C530 | |||
|description=CAGE_peak_at_chr14:85880761..85880773,+ | |||
|id=chr14:85880761..85880773,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.26e-11!6;CL:0002138!1.26e-11!6;CL:0005022!1.26e-11!6;CL:0002139!1.45e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.49e-20;6!CL:0000054;2.05e-15;2!CL:0000137;2.05e-15;2!CL:0000092;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.63e-20,6;CL:0002138,8.63e-20,6;CL:0005022,8.63e-20,6;CL:0000054,2.37e-15,2;CL:0000137,2.37e-15,2;CL:0000092,2.37e-15,2 | |||
|ontology_enrichment_development_v019=CL:0005022;9.49e-20;6!UBERON:0007123;4.79e-07;5 | |||
|ontology_enrichment_disease=DOID:1749!5.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3112;7.48e-30;1!DOID:0060085;2.37e-29;1!DOID:3165;2.37e-29;1!DOID:0060121;2.37e-29;1!DOID:2438;2.37e-29;1!DOID:4418;2.37e-29;1!DOID:200;2.05e-15;2!DOID:4305;2.05e-15;2!DOID:7;3.16e-10;39!DOID:0060072;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.48e-30,1;DOID:0060085,3.16e-29,1;DOID:3165,3.16e-29,1;DOID:0060121,3.16e-29,1;DOID:2438,3.16e-29,1;DOID:4418,3.16e-29,1;DOID:200,2.37e-15,2;DOID:4305,2.37e-15,2;DOID:7,4.19e-12,39;DOID:0060072,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001473!1.01e-08!8;UBERON:0004536!1.01e-08!8;UBERON:0006558!1.01e-08!8;UBERON:0002046!1.27e-07!5;UBERON:0004117!1.27e-07!5;UBERON:0007689!1.27e-07!5;UBERON:0007123!1.27e-07!5;UBERON:0003091!1.27e-07!5;UBERON:0002465!5.68e-07!10;UBERON:0002369!9.61e-07!3;UBERON:0001235!9.61e-07!3;UBERON:0006858!9.61e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.37e-15;8!UBERON:0004536;4.37e-15;8!UBERON:0006558;4.37e-15;8!UBERON:0002465;2.81e-12;10!UBERON:0002369;9.90e-11;3!UBERON:0001235;9.90e-11;3!UBERON:0006858;9.90e-11;3!UBERON:0002405;4.06e-10;27!UBERON:0000014;2.26e-08;4!UBERON:0002046;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.07e-15,8;UBERON:0004536,4.07e-15,8;UBERON:0006558,4.07e-15,8;UBERON:0002465,2.66e-12,10;UBERON:0002369,8.17e-11,3;UBERON:0001235,8.17e-11,3;UBERON:0006858,8.17e-11,3;UBERON:0000014,2.43e-08,4;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33888245105868,0,0.760272105718513,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,1.94176834799221,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,7.36973628795435,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:85880761..85880773,+ | |||
}} |
Revision as of 21:20, 11 January 2014
Short description: | p@chr14:85880761..85880773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:85880761..85880773, + |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.63e-20 | 6 |
endothelial cell of lymphatic vessel | 8.63e-20 | 6 |
vascular lymphangioblast | 8.63e-20 | 6 |
bone matrix secreting cell | 2.37e-15 | 2 |
osteocyte | 2.37e-15 | 2 |
osteoclast | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.07e-15 | 8 |
lymph vasculature | 4.07e-15 | 8 |
lymphatic part of lymphoid system | 4.07e-15 | 8 |
lymphoid system | 2.66e-12 | 10 |
adrenal gland | 8.17e-11 | 3 |
adrenal cortex | 8.17e-11 | 3 |
adrenal/interrenal gland | 8.17e-11 | 3 |
zone of skin | 2.43e-08 | 4 |
thyroid gland | 4.79e-07 | 5 |
pharyngeal pouch | 4.79e-07 | 5 |
thyroid diverticulum | 4.79e-07 | 5 |
pharyngeal pouch 2 | 4.79e-07 | 5 |
thyroid primordium | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.48e-30 | 1 |
organ system benign neoplasm | 3.16e-29 | 1 |
skin benign neoplasm | 3.16e-29 | 1 |
integumentary system benign neoplasm | 3.16e-29 | 1 |
dermis tumor | 3.16e-29 | 1 |
cutaneous fibrous histiocytoma | 3.16e-29 | 1 |
giant cell tumor | 2.37e-15 | 2 |
bone giant cell tumor | 2.37e-15 | 2 |
disease of anatomical entity | 4.19e-12 | 39 |
benign neoplasm | 2.43e-08 | 4 |