FFCP PHASE1:Hg19::chr15:39527815..39527820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr15:39527815..39527820,+ | |||
|id=chr15:39527815..39527820,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.17e-30!42;CL:0000860!1.41e-27!45;CL:0000766!2.37e-18!76;CL:0002194!3.42e-18!63;CL:0000576!3.42e-18!63;CL:0000040!3.42e-18!63;CL:0000559!3.42e-18!63;CL:0002009!2.31e-17!65;CL:0000839!1.13e-16!70;CL:0000557!2.59e-16!71;CL:0000763!1.90e-09!112;CL:0000049!1.90e-09!112;CL:0000063!1.81e-08!578;CL:0000244!2.10e-08!4;CL:0000731!2.10e-08!4;CL:0000012!2.86e-07!682;CL:0002087!5.00e-07!119;CL:0002031!5.39e-07!124;CL:0000738!5.93e-07!140;CL:0000548!7.00e-07!679;CL:0000004!7.00e-07!679;CL:0000255!7.00e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.15e-64;33!CL:0002057;7.15e-64;33!CL:0000473;8.90e-43;39!CL:0000234;8.90e-43;39!CL:0000576;1.12e-30;48!CL:0000766;1.73e-19;69!CL:0000244;2.73e-12;4!CL:0000731;2.73e-12;4!CL:0002536;7.49e-11;2!CL:0000763;4.69e-10;100!CL:0000349;7.23e-09;19!CL:0002087;3.40e-08;104!CL:0002541;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.88e-54,42;CL:0002057,3.88e-54,42;CL:0000473,9.63e-47,48;CL:0000234,9.63e-47,48;CL:0002194,5.91e-40,59;CL:0000576,5.91e-40,59;CL:0000040,5.91e-40,59;CL:0000559,5.91e-40,59;CL:0002009,1.70e-38,61;CL:0000839,3.11e-35,66;CL:0000766,7.06e-35,72;CL:0000557,1.22e-34,67;CL:0000763,1.44e-21,108;CL:0000049,1.44e-21,108;CL:0002087,3.81e-18,115;CL:0002031,3.50e-17,120;CL:0000738,4.63e-16,136;CL:0002032,9.26e-13,161;CL:0000837,9.26e-13,161;CL:0000244,3.31e-12,4;CL:0000731,3.31e-12,4;CL:0000037,5.18e-12,168;CL:0000988,3.87e-11,177;CL:0002536,7.13e-11,2;CL:0000349,6.57e-09,19;CL:0002541,1.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.16e-41;42!CL:0000049;2.54e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.79e-14!14;UBERON:0000158!8.79e-14!14;UBERON:0002371!1.73e-13!80;UBERON:0001474!5.96e-12!86;UBERON:0004765!1.45e-10!101;UBERON:0001434!1.45e-10!101;UBERON:0002390!2.77e-10!102;UBERON:0003061!2.77e-10!102;UBERON:0002193!4.31e-10!112;UBERON:0000365!7.04e-10!5;UBERON:0002405!1.07e-09!115;UBERON:0003124!1.66e-08!7;UBERON:0000478!3.59e-08!24;UBERON:0005910!3.94e-08!6;UBERON:0003081!2.65e-07!216;UBERON:0000305!6.15e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.36e-17;10!UBERON:0000158;2.36e-17;10!UBERON:0000305;1.77e-11;7!UBERON:0000365;6.34e-10;5!UBERON:0005910;2.43e-08;6!UBERON:0003124;1.19e-07;3!UBERON:0000920;1.19e-07;3!UBERON:0000478;6.72e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.61e-30,76;UBERON:0001474,1.97e-27,82;UBERON:0004765,1.46e-24,90;UBERON:0002405,1.31e-23,93;UBERON:0002390,3.73e-22,98;UBERON:0003061,3.73e-22,98;UBERON:0001434,1.30e-21,100;UBERON:0002193,1.21e-19,108;UBERON:0003081,1.85e-13,203;UBERON:0005631,2.69e-12,14;UBERON:0000158,2.69e-12,14;UBERON:0002204,3.98e-12,167;UBERON:0000305,1.38e-11,7;UBERON:0004871,3.74e-10,8;UBERON:0000365,7.38e-10,5;UBERON:0005910,2.75e-08,6;UBERON:0000920,1.29e-07,3;UBERON:0000478,6.24e-07,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,1.74753097704138,2.11013582582763,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0,0,0,0,1.16318591023652,0,0,6.74044207026485,3.70051099219643,2.47765096716083,3.74000110018796,1.2808035326455,1.41889337933151,17.2372840368309,6.45484683583826,1.35426486594342,2.25890807451126,1.36453075028923,0.449446968890169,6.42776173978895,2.56743221660875,0.639337125799041,0.989553900560148,0,0,10.7377418292576,4.53908179752912,2.4912889959823,7.78870862295904,2.60741459210101,0.868755378820466,9.08099253950053,5.52416453981347,2.21523671208619,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.315404830067869,1.05427273493442,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,2.15252686335615,3.36942951335251,0.443430153536676,5.05391480455311,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,1.48482340416319,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0.69169171316418,0,0,1.27600463892768,0.0915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.870592065804026,0,0,0,0,0,0,0,0,0.548167698587004,1.78843150532691,0,0,4.64921157458896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52816153632368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91542842709595,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39527815..39527820,+ | |||
}} |
Revision as of 22:51, 11 January 2014
Short description: | p@chr15:39527815..39527820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39527815..39527820, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.88e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.88e-54 | 42 |
defensive cell | 9.63e-47 | 48 |
phagocyte | 9.63e-47 | 48 |
monopoietic cell | 5.91e-40 | 59 |
monocyte | 5.91e-40 | 59 |
monoblast | 5.91e-40 | 59 |
promonocyte | 5.91e-40 | 59 |
macrophage dendritic cell progenitor | 1.70e-38 | 61 |
myeloid lineage restricted progenitor cell | 3.11e-35 | 66 |
myeloid leukocyte | 7.06e-35 | 72 |
granulocyte monocyte progenitor cell | 1.22e-34 | 67 |
myeloid cell | 1.44e-21 | 108 |
common myeloid progenitor | 1.44e-21 | 108 |
nongranular leukocyte | 3.81e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.50e-17 | 120 |
leukocyte | 4.63e-16 | 136 |
hematopoietic oligopotent progenitor cell | 9.26e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.26e-13 | 161 |
transitional epithelial cell | 3.31e-12 | 4 |
urothelial cell | 3.31e-12 | 4 |
hematopoietic stem cell | 5.18e-12 | 168 |
hematopoietic cell | 3.87e-11 | 177 |
amniotic epithelial cell | 7.13e-11 | 2 |
extraembryonic cell | 6.57e-09 | 19 |
chorionic membrane mesenchymal stem cell | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.61e-30 | 76 |
bone element | 1.97e-27 | 82 |
skeletal element | 1.46e-24 | 90 |
immune system | 1.31e-23 | 93 |
hematopoietic system | 3.73e-22 | 98 |
blood island | 3.73e-22 | 98 |
skeletal system | 1.30e-21 | 100 |
hemolymphoid system | 1.21e-19 | 108 |
lateral plate mesoderm | 1.85e-13 | 203 |
extraembryonic membrane | 2.69e-12 | 14 |
membranous layer | 2.69e-12 | 14 |
musculoskeletal system | 3.98e-12 | 167 |
amnion | 1.38e-11 | 7 |
somatic layer of lateral plate mesoderm | 3.74e-10 | 8 |
urothelium | 7.38e-10 | 5 |
transitional epithelium | 2.75e-08 | 6 |
egg chorion | 1.29e-07 | 3 |
extraembryonic structure | 6.24e-07 | 24 |