FFCP PHASE1:Hg19::chr15:74495350..74495381,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558645_5end | |||
|coexpression_cluster_id=C2348 | |||
|description=CAGE_peak_1_at_ENST00000558645_5end | |||
|id=chr15:74495350..74495381,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.16e-07!7;CL:0000586!1.16e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.86e-10;5!CL:0000064;3.31e-08;3!CL:0000067;3.31e-08;3!CL:0005012;3.31e-08;3!CL:0002304;3.31e-08;3!CL:0000039;2.88e-07;7!CL:0000586;2.88e-07;7!CL:0002586;4.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.11e-10,5;CL:0000066,1.25e-08,253;CL:0000064,3.31e-08,3;CL:0000067,3.31e-08,3;CL:0005012,3.31e-08,3;CL:0002304,3.31e-08,3;CL:0000039,2.85e-07,7;CL:0000586,2.85e-07,7;CL:0002586,4.31e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.71e-10!22;DOID:2994!1.71e-10!22;DOID:0050687!1.35e-09!143;DOID:162!6.54e-09!235;DOID:14566!1.12e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.23e-07;22!DOID:2994;1.23e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.29e-13,143;DOID:162,8.78e-11,235;DOID:305,1.88e-10,106;DOID:14566,2.73e-10,239;DOID:3095,1.20e-07,22;DOID:2994,1.20e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.20e-11!11;UBERON:0000970!1.19e-09!20;UBERON:0000020!5.28e-09!23;UBERON:0002104!5.80e-09!21;UBERON:0000019!7.01e-09!19;UBERON:0000047!7.01e-09!19;UBERON:0004088!7.01e-09!19;UBERON:0003072!7.01e-09!19;UBERON:0003071!7.01e-09!19;UBERON:0004128!7.01e-09!19;UBERON:0001032!2.02e-08!24;UBERON:0004456!2.02e-08!24;UBERON:0001456!1.26e-07!21;UBERON:0000966!7.43e-07!5;UBERON:0005388!7.43e-07!5;UBERON:0001802!7.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.06e-19;11!UBERON:0000970;1.30e-16;20!UBERON:0000020;4.56e-16;23!UBERON:0002104;1.19e-15;21!UBERON:0001032;3.10e-15;24!UBERON:0004456;3.10e-15;24!UBERON:0000019;3.76e-15;19!UBERON:0000047;3.76e-15;19!UBERON:0004088;3.76e-15;19!UBERON:0010230;3.76e-15;19!UBERON:0001456;2.12e-13;21!UBERON:0000966;2.33e-11;5!UBERON:0005388;2.33e-11;5!UBERON:0001802;2.33e-11;5!UBERON:0000488;2.11e-10;4!UBERON:0006876;2.17e-09;11!UBERON:0001264;2.42e-09;10!UBERON:0001778;3.31e-08;3!UBERON:0001775;3.31e-08;3!UBERON:0002075;1.13e-07;18!UBERON:0010371;1.65e-07;31!UBERON:0001801;1.91e-07;14!UBERON:0001781;4.93e-07;3!UBERON:0001782;4.93e-07;3!UBERON:0002203;7.37e-07;6!UBERON:0001768;7.37e-07;6!UBERON:0002200;7.37e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.77e-19,11;UBERON:0000970,1.16e-15,21;UBERON:0002104,1.16e-15,21;UBERON:0000020,3.35e-15,24;UBERON:0001032,3.35e-15,24;UBERON:0004456,3.35e-15,24;UBERON:0000019,2.84e-14,20;UBERON:0000047,2.84e-14,20;UBERON:0010312,2.84e-14,20;UBERON:0004088,2.84e-14,20;UBERON:0010230,2.84e-14,20;UBERON:0003072,2.84e-14,20;UBERON:0004128,2.84e-14,20;UBERON:0003071,2.84e-14,20;UBERON:0001456,1.11e-12,22;UBERON:0000488,2.11e-10,4;UBERON:0000966,2.00e-09,6;UBERON:0005388,2.00e-09,6;UBERON:0001802,2.00e-09,6;UBERON:0006876,2.12e-09,11;UBERON:0001264,2.58e-09,10;UBERON:0001778,3.31e-08,3;UBERON:0001775,3.31e-08,3;UBERON:0005085,4.14e-08,31;UBERON:0002075,1.23e-07,18;UBERON:0001801,1.88e-07,14;UBERON:0001782,4.31e-07,3;UBERON:0005424,4.31e-07,3;UBERON:0002203,7.38e-07,6;UBERON:0001768,7.38e-07,6;UBERON:0002200,7.38e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,1.31064823278103,1.05506791291381,0.247532705920093,0.994192127183747,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,23.5391694738529,32.1507626320718,25.2085834939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,3.17850598054356,2.88087962239999,0.70296429550139,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,2.19552671033272,2.38553582978673,3.60201222895507,3.00617059544574,5.55105871926382,6.93456982244077,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,28.8233921301523,0,0,0,0.0925884451585296,0,0,12.9898207822746,4.521285794028,9.7449216215732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,10.0270815831654,1.3200891447771,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,2.00068208423871,0.542530047399471,0.207970861530807,0,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,3.32861967686659,2.05886054286514,0,0,0,0.606255142892519,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.276242966807689,0.229628896329213,3.09554985611419,0.524497659837696,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,6.41125312790973,4.92021968549559,2.60302715731442,0.309123034943167,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,4.09374206295634,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,1.34060455107157,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0.924843963529383,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01495229248653,0,0.23874448473769,0,0.614321404198464,0,0,0,0,11.1896466307837,0.19924798825107,0,0.755798243562828,0,0.369254416383208,0,1.43789361835723,7.51888933637558,0,0,0,0,0,0,0,0,0,0,4.32415103484899,4.57656570526979,3.54581522651905,19.6503722747635,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,7.83917274919404,4.39812457607883,8.69178975376064,0.957003479195758,2.1983422416447,0,1.02193298195737,0,0,0,0.19606253431774,0,0.189753732724185,0,0,1.79556088975062,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,1.21390189767046,0.394584402849391,0,0.30607276163049,0.31593289814244,0.450970258243478,0.103688191397247,7.97584647248622,15.8876138820239,13.1851825731035,3.58417289318877,0,0,0,2.74378712760257,0,0.17472666824203,0,0,0.146178634172371,0,0,1.588610280447,2.03382666702479,0,0,0.0633107959558787,3.12882212375685,0,0.213452994739353,47.1550678613827,0,0,0,0,0,0,0.135904206073614,0,1.01998217636322,0,0,0,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23366660328922,0,0,1.60753148465019,1.65047323916681,1.24632101408756,0,0,0,0.335434687599266,0,1.73100140845494,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,1.01980882368113,0,0,0,0,0.855434189421647,5.63852017853338,0,0,0,0,0,0,5.74507131993164,0,0,0,0,0.314108192500469,0,0,0,0,0,0.124192805882767,6.64073447693908,0,0.454947352624943,0,13.1748859030976,8.89836321033075,2.3187364577732,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,1.5652351854352,0,0.380805212168795,3.66183659884195,0,0,0,3.98095888698616,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,0,0.179088841081487,2.47041157728778,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,2.55788742607303,13.8015758587753,0.471797825567689,0.218419276384028,0.678930119816101,0,0.247871528518004,0.558644917973244,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0.161475645631851,0,6.87034029507179,0,0,1.03973099535304,0,0,0.198916222116275,0,0.20170506870352,0,1.30953347240711,0,36.5204532956102,0,0,0,0,0.546974809018219,0,0,0,13.6705797574367,23.0351789427663,7.73452561103295,0.606965604236632,0.227662191351298,1.24183318227694,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,42.9574030501705,16.4334156202036,18.4823866335319,0.695433089210318,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.447421727191169,0,0,0,0,0,0,0,25.8636007709779,0,0.11294608203896,5.38708532052603,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,22.4977962643129,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,2.14482922219634,5.79107531407586,7.34851305866334,0.917899467677836,1.87052183685892,0.827054095813604,1.0028301571695,0.151557396436479,0,0,0,0,0.23806443146374,0,0.496597714366863,0.112131862580613,0,0,0,0,0,0.143444410785353,0.665320713092027,2.19788825249631,0,0,0,0,0,0.813792356631477,0,0,0.641136984606466 | |||
|short_description=p1@ENST00000558645 | |||
}} |
Revision as of 00:30, 12 January 2014
Short description: | p1@ENST00000558645 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558645_5end |
Coexpression cluster: | C2348_gastric_Iris_retina_papillotubular_neuroblastoma_Ciliary_embryonic |
Association with transcript: | 0bp_to_ENST00000558645_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.11e-10 | 5 |
epithelial cell | 1.25e-08 | 253 |
ciliated cell | 3.31e-08 | 3 |
ciliated epithelial cell | 3.31e-08 | 3 |
multi-ciliated epithelial cell | 3.31e-08 | 3 |
non-pigmented ciliary epithelial cell | 3.31e-08 | 3 |
germ line cell | 2.85e-07 | 7 |
germ cell | 2.85e-07 | 7 |
retinal pigment epithelial cell | 4.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.77e-19 | 11 |
eye | 1.16e-15 | 21 |
visual system | 1.16e-15 | 21 |
sense organ | 3.35e-15 | 24 |
sensory system | 3.35e-15 | 24 |
entire sense organ system | 3.35e-15 | 24 |
camera-type eye | 2.84e-14 | 20 |
simple eye | 2.84e-14 | 20 |
immature eye | 2.84e-14 | 20 |
ocular region | 2.84e-14 | 20 |
eyeball of camera-type eye | 2.84e-14 | 20 |
optic cup | 2.84e-14 | 20 |
optic vesicle | 2.84e-14 | 20 |
eye primordium | 2.84e-14 | 20 |
face | 1.11e-12 | 22 |
atypical epithelium | 2.11e-10 | 4 |
retina | 2.00e-09 | 6 |
photoreceptor array | 2.00e-09 | 6 |
posterior segment of eyeball | 2.00e-09 | 6 |
vasculature of organ | 2.12e-09 | 11 |
pancreas | 2.58e-09 | 10 |
ciliary epithelium | 3.31e-08 | 3 |
ciliary body | 3.31e-08 | 3 |
ectodermal placode | 4.14e-08 | 31 |
viscus | 1.23e-07 | 18 |
anterior segment of eyeball | 1.88e-07 | 14 |
pigmented layer of retina | 4.31e-07 | 3 |
presumptive retinal pigmented epithelium | 4.31e-07 | 3 |
vasculature of eye | 7.38e-07 | 6 |
uvea | 7.38e-07 | 6 |
vasculature of head | 7.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.29e-13 | 143 |
cancer | 8.78e-11 | 235 |
carcinoma | 1.88e-10 | 106 |
disease of cellular proliferation | 2.73e-10 | 239 |
germ cell and embryonal cancer | 1.20e-07 | 22 |
germ cell cancer | 1.20e-07 | 22 |