FFCP PHASE1:Hg19::chr17:20946738..20946751,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12621 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=321bp_to_uc002gyl.3_5end | |||
|description=CAGE_peak_11_at_USP22_5end | |||
|id=chr17:20946738..20946751,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.98e-07;2!CL:0000558;4.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.96e-07,2;CL:0000765,8.96e-07,2;CL:0000050,8.96e-07,2;CL:0000038,8.96e-07,2;CL:0000558,8.96e-07,2;CL:0000547,8.96e-07,2;CL:0000549,8.96e-07,2;CL:0000550,8.96e-07,2;CL:0000552,8.96e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.04e-12;20!UBERON:0002619;1.45e-10;22!UBERON:0002791;2.78e-09;32!UBERON:0001869;2.78e-09;32!UBERON:0001893;2.82e-09;34!UBERON:0000956;4.15e-09;25!UBERON:0000203;4.15e-09;25!UBERON:0003528;2.18e-08;34!UBERON:0002020;2.18e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.48e-11,20;UBERON:0007023,1.78e-10,114;UBERON:0002619,2.25e-10,22;UBERON:0002791,9.53e-10,32;UBERON:0001869,9.53e-10,32;UBERON:0003528,4.84e-09,34;UBERON:0002020,4.84e-09,34;UBERON:0001893,4.84e-09,34;UBERON:0000956,6.06e-09,25;UBERON:0000203,6.06e-09,25;UBERON:0002780,1.48e-08,41;UBERON:0001890,1.48e-08,41;UBERON:0003080,1.48e-08,41;UBERON:0006240,1.48e-08,41;UBERON:0000073,2.37e-08,53;UBERON:0002616,2.37e-08,53;UBERON:0003056,7.13e-08,61;UBERON:0001049,9.80e-08,56;UBERON:0005068,9.80e-08,56;UBERON:0006241,9.80e-08,56;UBERON:0007135,9.80e-08,56 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0,0,0,1.04474251279935,0,0,0.655324116390517,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0.612002073732759,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.164201178899891,0.393553906568396,0,0.383829398097213,0.154816123316076,2.75826367343678,0.6024118375565,0.739508020333575,0.0774672005803016,0.568676929949686,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0.755751887377619,0.242584061187816,1.16214518452842,0.411167888021826,0,0.28769239232215,0.256160706529101,0.47296445977717,0,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0.898893937780338,0.306083892370903,1.28371610830437,0.639337125799041,0.659702600373432,0.199463657621632,0,1.16083695451434,0,2.4912889959823,0.75374599577023,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0.425208599930087,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,2.66852776159066,0,0,1.14950487990897,1.32208974556972,0,0,0.587237189370939,1.14681968437569,1.32171328579026,0,0,1.180258620683,0.786021525498329,0.616804496998528,0.167186495390678,0.651844533267181,1.89379122293893,1.94826728407911,0.222820913770347,0,0.221533894583621,0.270803863765016,0.640456598628376,0.650296737799391,0,0,0.579606171470105,1.03800594213442,1.33770414044857,1.04535523804977,0.226618685395132,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,1.30216690771284,0,0.752875595388864,1.02389288923535,1.24930726552346,1.4206635122641,0.821127996921047,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0.255725123687061,1.0843174571537,0,0.579386075843295,1.5905718941022,0,0.0945348171640679,0,0.351339142772504,0.589405839739707,0.728590576585084,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,0,1.74437620857014,1.49091585508596,0.12663051166458,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.469737994575059,0.485618833104395,0.421352420106746,0.408308342509787,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0.250237039743928,0.831192346452549,0,0.30648779579902,0.150238058906597,0.680593098960126,0.358779271377724,0.640672166455702,0,0,0.412210116953756,0.515281080091258,0.37223371266318,0.337552664482532,0.0974370051611986,0.504867548488229,0.368199594569197,0.323292113637624,0,0.302256294682921,0.508681776931463,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.464775771478074,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0.383382679165211,0.492663237895943,0.264145302039678,0.207328115540772,0,0.50496973370552,0.253991577168676,0.381988425558278,0,0,0,0.600686115687835,0.285826432630578,0.224262168690721,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,1.02882949704857,1.41849132023278,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.560425719967636,0.591092280605782,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0.749007023947182,0,1.65766205374414,0,0,0,0,0.356857977594324,0,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0,0.173767228936166,0.391602314925481,0.343143423810856,0.413536052245775,0.431428401637234,0.640365346820666,1.21251028578504,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.462629081407967,0,0.492762936082855,0,0,0.241718899183244,0.200506470303285,0.644566922551274,0.459257792658427,0.728364672026868,0,0.902399225814824,0.308061348417659,0.784349769176855,0,0,0,0.340187410553031,0,0,0.541892875087706,0,0.254876273045038,0.831076008928724,1.11937377361089,2.41185864310528,1.0457418040996,0,0,0,0.206082023295445,0,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.95460974377781,0.78494864019923,0.179872457583315,0.274537029736055,0.1178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| |||
|short_description=p11@USP22 | |||
}} |
Revision as of 14:16, 20 January 2014
Short description: | p11@USP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_USP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 321bp_to_uc002gyl.3_5end |
EntrezGene: | USP22 |
HGNC: | 12621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.96e-07 | 2 |
erythroblast | 8.96e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 8.96e-07 | 2 |
erythroid progenitor cell | 8.96e-07 | 2 |
reticulocyte | 8.96e-07 | 2 |
proerythroblast | 8.96e-07 | 2 |
basophilic erythroblast | 8.96e-07 | 2 |
polychromatophilic erythroblast | 8.96e-07 | 2 |
orthochromatic erythroblast | 8.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.48e-11 | 20 |
adult organism | 1.78e-10 | 114 |
regional part of cerebral cortex | 2.25e-10 | 22 |
regional part of telencephalon | 9.53e-10 | 32 |
cerebral hemisphere | 9.53e-10 | 32 |
brain grey matter | 4.84e-09 | 34 |
gray matter | 4.84e-09 | 34 |
telencephalon | 4.84e-09 | 34 |
cerebral cortex | 6.06e-09 | 25 |
pallium | 6.06e-09 | 25 |
regional part of forebrain | 1.48e-08 | 41 |
forebrain | 1.48e-08 | 41 |
anterior neural tube | 1.48e-08 | 41 |
future forebrain | 1.48e-08 | 41 |
regional part of nervous system | 2.37e-08 | 53 |
regional part of brain | 2.37e-08 | 53 |
pre-chordal neural plate | 7.13e-08 | 61 |
neural tube | 9.80e-08 | 56 |
neural rod | 9.80e-08 | 56 |
future spinal cord | 9.80e-08 | 56 |
neural keel | 9.80e-08 | 56 |