FFCP PHASE1:Hg19::chr17:41620493..41620539,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr17:41620493..41620539,- | |||
|id=chr17:41620493..41620539,- | |||
|ontology_enrichment_celltype=CL:0002322!3.51e-18!5;CL:0000039!8.42e-09!7;CL:0000586!8.42e-09!7;CL:0002367!5.22e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.54e-47;5!CL:0000039;1.07e-22;7!CL:0000586;1.07e-22;7!CL:0002321;1.13e-15;15!CL:0000148;4.57e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.28e-47,5;CL:0000039,1.07e-22,7;CL:0000586,1.07e-22,7;CL:0000148,4.38e-09,10;CL:0000541,4.38e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.71e-16;10!UBERON:0005564;5.71e-16;10!UBERON:0006242;8.62e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.84e-11;1!DOID:4549;5.84e-11;1!DOID:5861;5.84e-11;1!DOID:6496;5.84e-11;1!DOID:3095;6.37e-11;22!DOID:2994;6.37e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.10e-11,22;DOID:2994,6.10e-11,22;DOID:3371,6.14e-11,1;DOID:4549,6.14e-11,1;DOID:5861,6.14e-11,1;DOID:6496,6.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.21e-13!82;UBERON:0005743!2.23e-12!86;UBERON:0001049!5.07e-12!57;UBERON:0005068!5.07e-12!57;UBERON:0006241!5.07e-12!57;UBERON:0007135!5.07e-12!57;UBERON:0000955!8.92e-12!69;UBERON:0006238!8.92e-12!69;UBERON:0002616!1.90e-11!59;UBERON:0003075!3.36e-11!86;UBERON:0007284!3.36e-11!86;UBERON:0000073!9.59e-11!94;UBERON:0001016!9.59e-11!94;UBERON:0002346!1.72e-10!90;UBERON:0002780!2.50e-10!41;UBERON:0001890!2.50e-10!41;UBERON:0006240!2.50e-10!41;UBERON:0003080!5.05e-10!42;UBERON:0000033!5.42e-10!123;UBERON:0003056!8.60e-10!61;UBERON:0000153!2.86e-09!129;UBERON:0007811!2.86e-09!129;UBERON:0004121!9.20e-09!169;UBERON:0001950!1.18e-08!20;UBERON:0003296!1.76e-08!4;UBERON:0010133!1.76e-08!4;UBERON:0000924!2.05e-08!173;UBERON:0006601!2.05e-08!173;UBERON:0000007!3.56e-08!2;UBERON:0005969!5.22e-08!2;UBERON:0003956!5.22e-08!2;UBERON:0001869!6.93e-08!32;UBERON:0002619!8.62e-08!22;UBERON:0000473!1.09e-07!8;UBERON:0001893!2.49e-07!34;UBERON:0000956!9.55e-07!25;UBERON:0000203!9.55e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.74e-20;8!UBERON:0000007;1.34e-19;2!UBERON:0003135;1.54e-14;11!UBERON:0003296;2.79e-10;4!UBERON:0010133;2.79e-10;4!UBERON:0000922;1.80e-09;49!UBERON:0000945;1.66e-08;5!UBERON:0010039;1.66e-08;5!UBERON:0000991;1.08e-07;21!UBERON:0003101;2.39e-07;22!UBERON:0000079;2.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.75e-20,8;UBERON:0000007,1.41e-19,2;UBERON:0003135,1.54e-14,11;UBERON:0003296,2.85e-10,4;UBERON:0010133,2.85e-10,4;UBERON:0000991,1.08e-07,21;UBERON:0009196,1.08e-07,21;UBERON:0009117,1.08e-07,21;UBERON:0005564,1.08e-07,21;UBERON:0004176,2.39e-07,22;UBERON:0003101,2.39e-07,22;UBERON:0000079,2.39e-07,22;UBERON:0004458,9.98e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26907971453584,3.31324420803713,3.83440011469411,3.21349270547648,3.78481276313443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05978182780901,0,0,0,0.126621591911757,0,0,3.62870091056899,0,1.00863292007874,5.72682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.26961417541674,0,0,0,0,0.964518890790115,0.412618309791701,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,42.6703867612171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.443910671357348,0.546974809018219,0,0,0,0,0,0.336283722218824,1.21393120847326,3.41493287026946,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0,0.280272163313789,0,0,0,0,0,5.34710556693376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,6.31086248772738,0.135982980381829,0,0,0,0,0,0.126166424835079,1.96678029534652,0,26.7210733923992,23.5151316633693,82.4297248827559,5.51556586443225,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:41620493..41620539,- | |||
}} |
Revision as of 15:34, 20 January 2014
Short description: | p@chr17:41620493..41620539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41620493..41620539, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.28e-47 | 5 |
germ line cell | 1.07e-22 | 7 |
germ cell | 1.07e-22 | 7 |
melanocyte | 4.38e-09 | 10 |
melanoblast | 4.38e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 6.75e-20 | 8 |
pituitary gland | 1.41e-19 | 2 |
male reproductive organ | 1.54e-14 | 11 |
gland of diencephalon | 2.85e-10 | 4 |
neuroendocrine gland | 2.85e-10 | 4 |
gonad | 1.08e-07 | 21 |
indifferent external genitalia | 1.08e-07 | 21 |
indifferent gonad | 1.08e-07 | 21 |
gonad primordium | 1.08e-07 | 21 |
external genitalia | 2.39e-07 | 22 |
male organism | 2.39e-07 | 22 |
male reproductive system | 2.39e-07 | 22 |
body cavity or lining | 9.98e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.10e-11 | 22 |
germ cell cancer | 6.10e-11 | 22 |
chondrosarcoma | 6.14e-11 | 1 |
extraosseous chondrosarcoma | 6.14e-11 | 1 |
myxoid chondrosarcoma | 6.14e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.14e-11 | 1 |