FFCP PHASE1:Hg19::chr17:4872699..4872734,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2421 | |||
|description=CAGE_peak_at_chr17:4872699..4872734,- | |||
|id=chr17:4872699..4872734,- | |||
|ontology_enrichment_celltype=CL:0000055!4.78e-26!180;CL:0000548!1.64e-17!679;CL:0000004!1.64e-17!679;CL:0000255!1.64e-17!679;CL:0000057!9.38e-17!75;CL:0000012!1.39e-16!682;CL:0000144!1.22e-12!625;CL:0002371!2.68e-12!591;CL:0000003!4.50e-11!722;CL:0000183!9.03e-11!59;CL:0000187!1.08e-10!54;CL:0000680!1.27e-10!57;CL:0000056!1.27e-10!57;CL:0000355!1.27e-10!57;CL:0000192!4.69e-09!42;CL:0000514!4.69e-09!42;CL:0000393!1.90e-08!60;CL:0000211!1.90e-08!60;CL:0000359!6.27e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.45e-07;43!CL:0000134;2.71e-07;55!CL:0000057;4.76e-07;73!CL:0000048;6.68e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.75e-18,76;CL:0000187,3.39e-11,55;CL:0000680,3.89e-11,58;CL:0000056,3.89e-11,58;CL:0000355,3.89e-11,58;CL:0000192,2.32e-09,43;CL:0000514,2.32e-09,43;CL:0000393,2.14e-08,61;CL:0000211,2.14e-08,61;CL:0000048,3.09e-07,427;CL:0000723,3.50e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.45e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.92e-09!83;UBERON:0002329!5.92e-09!83;UBERON:0003077!5.92e-09!83;UBERON:0003059!5.92e-09!83;UBERON:0007282!5.92e-09!83;UBERON:0009618!5.92e-09!83;UBERON:0007285!5.92e-09!83;UBERON:0000486!1.06e-08!82;UBERON:0001134!1.28e-08!61;UBERON:0002036!1.28e-08!61;UBERON:0003082!1.28e-08!61;UBERON:0005256!1.61e-08!143;UBERON:0002385!2.70e-08!63;UBERON:0001015!2.70e-08!63;UBERON:0000383!2.70e-08!63;UBERON:0000481!3.25e-08!347;UBERON:0004290!3.86e-08!70;UBERON:0000475!4.28e-08!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.99e-09,62;UBERON:0002036,2.99e-09,62;UBERON:0003082,2.99e-09,62;UBERON:0007503,4.53e-09,78;UBERON:0002385,8.72e-09,64;UBERON:0001015,8.72e-09,64;UBERON:0000383,8.72e-09,64;UBERON:0002329,1.41e-08,71;UBERON:0003059,1.41e-08,71;UBERON:0007282,1.41e-08,71;UBERON:0004290,1.41e-08,71;UBERON:0009618,1.41e-08,71;UBERON:0000486,1.85e-08,83;UBERON:0007524,2.35e-08,73;UBERON:0003077,3.27e-08,72;UBERON:0007285,3.27e-08,72;UBERON:0003104,7.73e-07,160;UBERON:0009142,7.73e-07,160 | |||
|phase1_expression=15.8060189965384,7.27941781229343,14.9411668341729,6.00439790118782,6.70441641640932,9.59572376510406,5.06599756336621,11.370957721683,2.87304191019822,6.38908234903923,26.5164443829522,5.46103430325431,2.11013582582763,5.19818682432196,1.98838425436749,0.672325146451775,1.80808358407193,4.38186054232424,2.43966399395253,1.60057375499824,1.83600622119828,5.95563970808367,0.572471974262113,0.821246550437305,2.00868223351684,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,1.204823675113,5.17655614233503,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,1.23350366406548,1.23882548358041,0,2.0492856522328,0,0,1.29096936716765,1.35426486594342,0.376484679085209,0.818718450173537,0.449446968890169,0.612167784741805,2.24650318953266,0.639337125799041,0,0,0,1.45104619314292,4.53908179752912,1.86846674698672,0.502497330513487,0,0.434377689410233,0,2.94622108790052,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22551502573691,0.294605907474837,0,0,0.640456598628376,1.04047478047903,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,13.1698438698836,12.2889311810753,15.5414752297126,19.699126578672,2.3858578411533,8.75942766544745,1.79616152611729,3.76939975686359,3.42555664203192,0.851363990735132,18.5790597029197,7.78647329847302,0,0.522389211897802,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,1.53316637465883,1.89853131913626,0,0,0,12.210633459991,15.4061305025549,2.91250176828533,14.1677823470144,28.3968254541326,8.51204117276057,9.53151920241922,12.8098794875646,9.62003438826924,3.42332138939743,6.19669091520565,1.14423332179421,2.57307626996383,1.72852777344,29.0558575473908,2.18512053781224,0,1.49448680551801,3.28816596202542,1.94247533241758,0.98315564691574,1.22492502752936,2.57952066354713,7.33613046347935,7.12801714369232,8.90160945402805,27.3048408581408,25.1516349635683,1.5150250255866,2.75260743718321,1.6623846929051,6.58466431321257,7.35570709917647,8.11285518095623,3.28953331164061,7.71375433462106,8.96941033037983,5.08636562782948,3.90118424909723,2.57631323096097,11.3361837620077,7.63079110959518,5.56961896396179,3.99491721160914,8.83518209854401,8.74474037101844,7.43571861366535,11.3603069605317,4.63459651847145,7.79978724628243,0.773043412653187,1.36373060295417,0.573609190778008,0.243947412259191,0.132529768321485,0.69716365721711,0.829288440122964,0.252320850875628,0,1.56449532329816,2.57296375277154,1.38134921352481,0.464367928031979,2.88751792667834,6.38856720215157,3.54027849164014,2.89213235860178,5.84558055481688,5.01122721412534,2.60997681022206,3.10112008768378,3.72820783738158,2.30848294167834,0,8.41450642820675,3.2925920906512,5.88034845542168,0,1.96565443335525,0,0,1.22988438543114,8.23525489432923,4.06076056011915,4.49607013030478,0.904760751704678,3.24059558054854,10.4258657699304,5.19967392639789,7.21656710126366,1.15930404975077,15.145721556421,0,0,0,0,0,0,0,0,3.74935335947108,1.00789276919316,1.70130116690864,2.23896306757121,11.3347236020445,3.06706143332169,1.47798971368783,0.352193736052904,0,0.144119953416961,0,0.444485260045183,3.05590740446622,0,1.71072446022705,0.102827492703324,0.300343057843917,0.571652865261156,5.7186853016134,3.48768055066624,4.400297149257,12.0222695654733,57.2250313363012,2.535908257668,11.4353390131494,4.16029747645464,6.68739173081569,4.25547396069835,6.66055447540248,9.57952557509589,40.1539987989668,7.40916303102692,3.58309802723109,9.24019066730619,2.37585561880029,6.63166629531089,3.48613383440118,2.0994328148232,0,0,0,13.8982416185118,25.2696258835051,1.42636905040718,1.73737568001095,2.05476322550383,1.96967059563885,4.70757604772815,0,0,0,2.28685161800217,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.414415513436035,4.17151071845076,1.00034104211935,9.22301080579101,7.90289273817067,6.78030157429215,10.7237642223076,13.471262724162,15.3482510861137,20.4666753650386,18.6251528326509,13.9487375692442,6.63729006750131,2.95404289191482,4.69922777910577,2.05886054286514,0,0,0.106727557803444,3.94065842880137,3.32870879020994,5.14063498660456,21.8334870880524,23.0192959932094,13.4716845327875,17.9394808957981,9.21073048320066,12.707459770345,8.90508398669946,3.23840356985577,5.50441348470694,5.50251945292521,5.19254429183621,3.60252173225874,0.362578348774867,0.802025881213139,15.3775251522947,7.11849578620562,2.91345868810747,1.83574180943194,13.5359883872224,4.38987421495164,10.1965469992991,4.38417673959782,2.21658420675039,0,0,2.59099099322567,4.62681758070868,4.06419656315779,8.52872615553251,1.01950509218015,4.98645605357235,3.80587083027703,0,0,5.12900250232778,3.93617574839647,26.0302715731442,1.23649213977267,0.915694648183434,0.82509499920588,5.74265537996172,3.25030123018261,6.42735719376638,16.8207049828292,2.61882649094895,3.22357716924872,1.7918754422989,6.44521469209642,1.74020032697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| |||
|short_description=p@chr17:4872699..4872734,- | |||
}} |
Revision as of 13:18, 20 January 2014
Short description: | p@chr17:4872699..4872734, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4872699..4872734, - |
Coexpression cluster: | C2421_pineal_Fibroblast_cord_Keratocytes_mesenchymal_Smooth_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.75e-18 | 76 |
muscle cell | 3.39e-11 | 55 |
muscle precursor cell | 3.89e-11 | 58 |
myoblast | 3.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.89e-11 | 58 |
smooth muscle cell | 2.32e-09 | 43 |
smooth muscle myoblast | 2.32e-09 | 43 |
electrically responsive cell | 2.14e-08 | 61 |
electrically active cell | 2.14e-08 | 61 |
multi fate stem cell | 3.09e-07 | 427 |
somatic stem cell | 3.50e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.99e-09 | 62 |
striated muscle tissue | 2.99e-09 | 62 |
myotome | 2.99e-09 | 62 |
epithelial vesicle | 4.53e-09 | 78 |
muscle tissue | 8.72e-09 | 64 |
musculature | 8.72e-09 | 64 |
musculature of body | 8.72e-09 | 64 |
somite | 1.41e-08 | 71 |
presomitic mesoderm | 1.41e-08 | 71 |
presumptive segmental plate | 1.41e-08 | 71 |
dermomyotome | 1.41e-08 | 71 |
trunk paraxial mesoderm | 1.41e-08 | 71 |
multilaminar epithelium | 1.85e-08 | 83 |
dense mesenchyme tissue | 2.35e-08 | 73 |
paraxial mesoderm | 3.27e-08 | 72 |
presumptive paraxial mesoderm | 3.27e-08 | 72 |
mesenchyme | 7.73e-07 | 160 |
entire embryonic mesenchyme | 7.73e-07 | 160 |