FFCP PHASE1:Hg19::chr18:12255336..12255356,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr18:12255336..12255356,- | |||
|id=chr18:12255336..12255356,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!9.79e-09!1;DOID:4549!9.79e-09!1;DOID:5861!9.79e-09!1;DOID:6496!9.79e-09!1;DOID:6193!1.13e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:6193;1.81e-40;1!DOID:3350;5.15e-21;2!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:6193,1.48e-40,1;DOID:3350,4.66e-21,2;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.40e-72!32;UBERON:0001893!1.12e-67!34;UBERON:0002619!3.00e-65!22;UBERON:0001950!1.29e-62!20;UBERON:0002791!2.46e-62!33;UBERON:0002020!1.85e-60!34;UBERON:0003528!1.85e-60!34;UBERON:0000956!2.14e-57!25;UBERON:0000203!2.14e-57!25;UBERON:0002780!8.30e-56!41;UBERON:0001890!8.30e-56!41;UBERON:0006240!8.30e-56!41;UBERON:0003080!2.00e-54!42;UBERON:0001049!2.02e-39!57;UBERON:0005068!2.02e-39!57;UBERON:0006241!2.02e-39!57;UBERON:0007135!2.02e-39!57;UBERON:0000955!4.94e-39!69;UBERON:0006238!4.94e-39!69;UBERON:0002616!5.51e-38!59;UBERON:0003056!1.21e-36!61;UBERON:0001017!2.21e-32!82;UBERON:0005743!9.92e-31!86;UBERON:0000200!1.40e-29!6;UBERON:0003075!5.65e-28!86;UBERON:0007284!5.65e-28!86;UBERON:0000073!1.65e-27!94;UBERON:0001016!1.65e-27!94;UBERON:0002346!1.41e-26!90;UBERON:0000033!1.15e-22!123;UBERON:0001871!2.26e-22!7;UBERON:0007023!2.30e-22!115;UBERON:0002771!2.47e-22!3;UBERON:0002021!2.50e-22!5;UBERON:0000153!1.95e-21!129;UBERON:0007811!1.95e-21!129;UBERON:0004121!2.42e-15!169;UBERON:0000924!6.72e-15!173;UBERON:0006601!6.72e-15!173;UBERON:0001872!3.73e-13!5;UBERON:0000025!1.27e-11!194;UBERON:0009663!3.86e-09!7;UBERON:0000064!1.01e-08!219;UBERON:0004111!1.41e-08!241;UBERON:0007190!1.75e-08!1;UBERON:0002022!2.02e-08!1;UBERON:0002902!2.50e-08!1;UBERON:0009899!2.50e-08!1;UBERON:0002581!3.33e-08!1;UBERON:0002146!3.83e-08!1;UBERON:0005623!3.83e-08!1;UBERON:0001882!4.41e-08!1;UBERON:0005403!4.41e-08!1;UBERON:0003112!4.72e-08!1;UBERON:0000032!4.72e-08!1;UBERON:0005253!4.72e-08!1;UBERON:0003128!4.72e-08!1;UBERON:0002241!4.72e-08!1;UBERON:0001703!4.72e-08!1;UBERON:0004761!4.72e-08!1;UBERON:0009617!4.72e-08!1;UBERON:0000369!1.33e-07!4;UBERON:0002435!1.33e-07!4;UBERON:0000204!1.33e-07!4;UBERON:0010082!1.33e-07!4;UBERON:0000477!1.79e-07!286;UBERON:0002308!3.26e-07!9;UBERON:0002420!3.26e-07!9;UBERON:0000125!3.26e-07!9;UBERON:0007245!3.26e-07!9;UBERON:0010009!3.26e-07!9;UBERON:0010011!3.26e-07!9;UBERON:0000454!3.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;3.11e-27;6!UBERON:0002771;5.15e-21;2!UBERON:0002702;5.15e-21;2!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0001870;1.71e-14;3!UBERON:0001950;1.48e-08;20!UBERON:0002619;6.75e-08;22!UBERON:0000956;4.28e-07;25!UBERON:0000203;4.28e-07;25!UBERON:0001871;5.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,4.06e-27,6;UBERON:0002771,5.70e-21,2;UBERON:0002702,6.96e-21,2;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0001870,2.09e-14,3;UBERON:0001950,1.59e-08,20;UBERON:0002619,7.23e-08,22;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25;UBERON:0001871,6.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37588825977293,0,0,0,0,5.03059922141551,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,1.09823638411767,1.001527445652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.504143392443436,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0.826747186004736,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883889372481891,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr18:12255336..12255356,- | |||
}} |
Revision as of 18:36, 20 January 2014
Short description: | p@chr18:12255336..12255356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12255336..12255356, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gyrus | 4.06e-27 | 6 |
middle temporal gyrus | 5.70e-21 | 2 |
middle frontal gyrus | 6.96e-21 | 2 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
frontal cortex | 2.09e-14 | 3 |
neocortex | 1.59e-08 | 20 |
regional part of cerebral cortex | 7.23e-08 | 22 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
temporal lobe | 6.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
epithelioid sarcoma | 1.48e-40 | 1 |
mesenchymal cell neoplasm | 4.66e-21 | 2 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |