FFCP PHASE1:Hg19::chr1:1260169..1260242,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28116 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TA50 | |||
|association_with_transcript=22bp_to_ENST00000343938_5end | |||
|description=CAGE_peak_1_at_GLTPD1_5end | |||
|id=chr1:1260169..1260242,+ | |||
|ontology_enrichment_celltype=CL:0000220!9.15e-17!246;CL:0002321!5.98e-16!248;CL:0000222!6.61e-15!119;CL:0002078!2.73e-14!44;CL:0000115!2.85e-14!35;CL:0000066!7.06e-14!254;CL:0000213!2.53e-12!57;CL:0000215!2.53e-12!57;CL:0002139!5.65e-11!24;CL:0000071!2.84e-09!18;CL:0002546!2.84e-09!18;CL:0000076!1.18e-07!62;CL:1000449!2.60e-07!16;CL:1000497!7.80e-07!18;CL:0002518!7.80e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.35e-12;36!CL:0002139;5.49e-11;24!CL:0002078;1.33e-09;45!CL:0000071;2.87e-09;18!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:1000449;2.35e-07;15!CL:1000497;8.04e-07;17!CL:0002518;8.04e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.61e-16,250;CL:0000222,2.89e-15,121;CL:0002078,1.44e-14,45;CL:0000115,1.54e-14,36;CL:0000066,9.04e-14,253;CL:0000213,1.35e-12,58;CL:0000215,1.35e-12,58;CL:0002139,5.65e-11,24;CL:0000071,2.84e-09,18;CL:0002546,2.84e-09,18;CL:0000076,9.70e-08,63;CL:1000449,2.39e-07,15;CL:1000497,7.84e-07,17;CL:0002518,7.84e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.87e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.87e-09;18!UBERON:0001986;2.87e-09;18!UBERON:0004852;2.87e-09;18!UBERON:0003914;7.19e-08;74!UBERON:0000487;1.65e-07;22!UBERON:0006555;2.35e-07;15!UBERON:0004819;2.35e-07;15!UBERON:0001285;2.35e-07;15!UBERON:0007684;2.35e-07;15!UBERON:0000353;3.01e-07;15!UBERON:0007500;4.25e-07;56!UBERON:0001981;4.25e-07;56!UBERON:0004537;4.25e-07;56!UBERON:0000055;4.30e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.61e-15,117;UBERON:0000055,2.10e-14,68;UBERON:0002049,4.82e-13,78;UBERON:0007798,4.82e-13,78;UBERON:0004111,9.17e-13,240;UBERON:0007500,2.29e-12,59;UBERON:0001981,2.29e-12,59;UBERON:0004537,2.29e-12,59;UBERON:0006965,2.29e-12,59;UBERON:0004872,2.46e-12,83;UBERON:0002100,1.05e-11,199;UBERON:0000119,7.15e-11,309;UBERON:0000483,1.83e-10,306;UBERON:0009569,1.85e-10,112;UBERON:0001009,1.85e-09,112;UBERON:0004638,2.84e-09,18;UBERON:0001986,2.84e-09,18;UBERON:0004852,2.84e-09,18;UBERON:0005177,1.28e-08,101;UBERON:0000025,1.40e-08,192;UBERON:0004535,2.18e-08,109;UBERON:0003103,3.64e-08,68;UBERON:0001637,3.94e-08,42;UBERON:0003509,3.94e-08,42;UBERON:0004572,3.94e-08,42;UBERON:0003104,5.51e-08,160;UBERON:0009142,5.51e-08,160;UBERON:0006555,7.02e-08,16;UBERON:0004819,7.02e-08,16;UBERON:0000487,1.54e-07,22;UBERON:0001008,1.56e-07,48;UBERON:0000490,1.66e-07,148;UBERON:0006554,1.93e-07,47;UBERON:0004211,2.39e-07,15;UBERON:0009773,2.39e-07,15;UBERON:0001231,2.39e-07,15;UBERON:0001285,2.39e-07,15;UBERON:0007684,2.39e-07,15;UBERON:0004208,2.39e-07,15;UBERON:0000353,2.91e-07,15;UBERON:0005256,7.01e-07,122 | |||
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| |||
|short_description=p1@GLTPD1 | |||
}} |
Revision as of 15:46, 10 January 2014
Short description: | p1@GLTPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLTPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000343938_5end |
EntrezGene: | GLTPD1 |
HGNC: | 28116 |
UniProt: | Q5TA50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.61e-16 | 250 |
mesodermal cell | 2.89e-15 | 121 |
meso-epithelial cell | 1.44e-14 | 45 |
endothelial cell | 1.54e-14 | 36 |
epithelial cell | 9.04e-14 | 253 |
lining cell | 1.35e-12 | 58 |
barrier cell | 1.35e-12 | 58 |
endothelial cell of vascular tree | 5.65e-11 | 24 |
blood vessel endothelial cell | 2.84e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.84e-09 | 18 |
squamous epithelial cell | 9.70e-08 | 63 |
epithelial cell of nephron | 2.39e-07 | 15 |
kidney cell | 7.84e-07 | 17 |
kidney epithelial cell | 7.84e-07 | 17 |