FFCP PHASE1:Hg19::chr1:26759295..26759302,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20603 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000525410_5end | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_3_at_DHDDS_5end | |||
|id=chr1:26759295..26759302,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.46e-12!15;CL:0002617!3.70e-11!2;CL:0000325!1.82e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!1.20e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!4.64e-17!5;UBERON:0005388!4.64e-17!5;UBERON:0001802!4.64e-17!5;UBERON:0001905!2.02e-11!2;UBERON:0002757!2.02e-11!2;UBERON:0010134!2.02e-11!2;UBERON:0002784!2.02e-11!2;UBERON:0005408!2.02e-11!2;UBERON:0001899!2.02e-11!2;UBERON:0000019!4.44e-10!19;UBERON:0000047!4.44e-10!19;UBERON:0004088!4.44e-10!19;UBERON:0003072!4.44e-10!19;UBERON:0003071!4.44e-10!19;UBERON:0004128!4.44e-10!19;UBERON:0000970!1.32e-09!20;UBERON:0002104!3.54e-09!21;UBERON:0001456!3.54e-09!21;UBERON:0000020!1.98e-08!23;UBERON:0003056!3.78e-08!61;UBERON:0001032!4.20e-08!24;UBERON:0004456!4.20e-08!24;UBERON:0005085!8.42e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,3.16027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@DHDDS | |||
}} |
Revision as of 17:15, 10 January 2014
Short description: | p3@DHDDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHDDS_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 26bp_to_ENST00000525410_5end |
EntrezGene: | DHDDS |
HGNC: | 20603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |