FFCP PHASE1:Hg19::chr1:7913114..7913132,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12636 | |||
|TSSclassifier=strong | |||
|UniProt=A8MXQ0,O95399 | |||
|association_with_transcript=-10bp_to_ENST00000400910,NM_006786_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_UTS2_5end | |||
|id=chr1:7913114..7913132,- | |||
|ontology_enrichment_celltype=CL:0002274!2.31e-08!5;CL:0000457!2.31e-08!5;CL:0002191!2.31e-08!5;CL:0000097!2.31e-08!5;CL:0000831!2.31e-08!5;CL:0002028!2.31e-08!5;CL:0000163!1.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.77e-07,5;CL:0002028,5.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.37e-10;3!UBERON:0003057;1.37e-10;3 | |||
|ontology_enrichment_disease=DOID:171!3.47e-20!10;DOID:3095!3.69e-11!22;DOID:2994!3.69e-11!22;DOID:8692!2.11e-07!31;DOID:169!7.77e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.48e-25;10!DOID:3095;4.44e-15;22!DOID:2994;4.44e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.58e-25,10;DOID:3095,4.74e-15,22;DOID:2994,4.74e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.48e-18!8;UBERON:0003076!8.32e-17!15;UBERON:0003057!8.32e-17!15;UBERON:0001896!1.08e-13!3;UBERON:0005290!1.08e-13!3;UBERON:0010096!1.08e-13!3;UBERON:0000988!1.03e-12!3;UBERON:0004733!5.17e-12!12;UBERON:0002028!5.17e-12!12;UBERON:0007277!5.17e-12!12;UBERON:0004732!4.86e-11!13;UBERON:0002148!3.12e-09!2;UBERON:0009662!3.12e-09!2;UBERON:0002240!9.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.98e-29;4!UBERON:0000923;5.98e-29;4!UBERON:0010316;5.98e-29;4!UBERON:0005291;5.98e-29;4!UBERON:0002050;3.21e-23;5!UBERON:0005423;3.21e-23;5!UBERON:0001896;5.19e-22;3!UBERON:0005290;5.19e-22;3!UBERON:0002298;2.25e-19;6!UBERON:0002240;1.37e-10;3!UBERON:0005174;1.37e-10;3!UBERON:0001137;1.37e-10;3!UBERON:0004733;8.86e-10;12!UBERON:0002028;8.86e-10;12!UBERON:0004732;4.89e-09;13!UBERON:0001052;4.71e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.34e-22,3;UBERON:0005290,4.34e-22,3;UBERON:0010096,4.34e-22,3;UBERON:0002298,2.05e-19,6;UBERON:0003076,8.34e-17,15;UBERON:0003057,8.34e-17,15;UBERON:0002240,1.34e-10,3;UBERON:0005174,1.34e-10,3;UBERON:0001137,1.34e-10,3;UBERON:0004733,8.46e-10,12;UBERON:0002028,8.46e-10,12;UBERON:0007277,8.46e-10,12;UBERON:0004732,4.69e-09,13;UBERON:0001052,4.23e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,490.199921706464,124.324388826675,0,0.144119953416961,0,0,0,0,0,0,13.5154376029763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,7.04935025439248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,66.485851851382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.58420511602,0.831058409500782,0,0,0,0,9.05938500188159,0,0,11.4495987861492,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0679623879319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,4.32256514013075,0,0,0,0,0.164185041498678,0,0,0,0,10.4719194652856,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,10.9819761021484,8.75559281473507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0291789645635,0,6.95903372811503,7.4401222035589,293.975632822353,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40696995487696,0,0,0,0,0,0,0,0,0.135939465953663,0,0,3.11447925297794,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,2.94462700672418,0,17.7515405585028,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14028650910293,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@UTS2 | |||
}} |
Revision as of 16:07, 10 January 2014
Short description: | p2@UTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UTS2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -10bp_to_ENST00000400910, NM_006786_5end |
EntrezGene: | UTS2 |
HGNC: | 12636 |
UniProt: | A8MXQ0O95399 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.77e-07 | 5 |
basophil mast progenitor cell | 5.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.34e-22 | 3 |
myelencephalon | 4.34e-22 | 3 |
future myelencephalon | 4.34e-22 | 3 |
brainstem | 2.05e-19 | 6 |
posterior neural tube | 8.34e-17 | 15 |
chordal neural plate | 8.34e-17 | 15 |
spinal cord | 1.34e-10 | 3 |
dorsal region element | 1.34e-10 | 3 |
dorsum | 1.34e-10 | 3 |
segmental subdivision of hindbrain | 8.46e-10 | 12 |
hindbrain | 8.46e-10 | 12 |
presumptive hindbrain | 8.46e-10 | 12 |
segmental subdivision of nervous system | 4.69e-09 | 13 |
rectum | 4.23e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.58e-25 | 10 |
germ cell and embryonal cancer | 4.74e-15 | 22 |
germ cell cancer | 4.74e-15 | 22 |