FFCP PHASE1:Hg19::chr20:41466192..41466207,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_at_chr20:41466192..41466207,- | |||
|id=chr20:41466192..41466207,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.17e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.89e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.57e-16;29!UBERON:0006965;3.27e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!6.11e-30!3;UBERON:0004054!6.11e-30!3;UBERON:0005904!1.23e-22!4;UBERON:0003127!1.70e-21!2;UBERON:0003135!1.95e-14!11;UBERON:0002171!1.06e-11!1;UBERON:0006518!1.06e-11!1;UBERON:0008949!1.06e-11!1;UBERON:0000101!1.06e-11!1;UBERON:0002167!1.06e-11!1;UBERON:0001301!2.96e-11!1;UBERON:0007029!3.28e-11!1;UBERON:0000998!3.63e-11!1;UBERON:0006868!3.63e-11!1;UBERON:0001000!4.44e-11!1;UBERON:0005352!4.44e-11!1;UBERON:0007023!8.13e-09!115;UBERON:0005178!1.88e-07!34;UBERON:0002224!1.88e-07!34;UBERON:0003101!2.55e-07!22;UBERON:0000079!2.55e-07!22;UBERON:0005181!3.10e-07!35;UBERON:0003133!4.98e-07!48;UBERON:0003126!8.86e-07!7;UBERON:0001005!8.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.99e-37;2!UBERON:0002171;2.06e-19;1!UBERON:0006518;2.06e-19;1!UBERON:0008949;2.06e-19;1!UBERON:0000101;2.06e-19;1!UBERON:0002167;2.06e-19;1!UBERON:0003126;2.13e-11;7!UBERON:0001005;2.13e-11;7!UBERON:0005178;8.04e-11;34!UBERON:0002224;8.04e-11;34!UBERON:0006955;2.17e-10;2!UBERON:0004801;2.17e-10;2!UBERON:0000341;3.27e-10;2!UBERON:0005181;2.27e-09;35!UBERON:0000065;3.55e-08;44!UBERON:0002048;4.44e-08;22!UBERON:0000117;4.44e-08;22!UBERON:0000171;4.44e-08;22!UBERON:0000170;4.44e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.94e-37,2;UBERON:0002171,1.30e-19,1;UBERON:0006518,1.30e-19,1;UBERON:0008949,1.30e-19,1;UBERON:0000101,1.30e-19,1;UBERON:0002167,1.30e-19,1;UBERON:0005178,1.66e-13,34;UBERON:0002224,1.66e-13,34;UBERON:0005181,4.01e-13,35;UBERON:0008947,4.28e-12,38;UBERON:0003258,4.28e-12,38;UBERON:0003126,2.30e-11,7;UBERON:0001005,2.30e-11,7;UBERON:0006955,1.89e-10,2;UBERON:0004801,1.89e-10,2;UBERON:0000341,3.27e-10,2;UBERON:0000915,7.46e-09,52;UBERON:0000065,1.58e-08,54;UBERON:0002048,4.13e-08,22;UBERON:0000117,4.13e-08,22;UBERON:0000171,4.13e-08,22;UBERON:0000170,4.13e-08,22;UBERON:0005597,4.13e-08,22;UBERON:0000118,4.13e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79323189425963,0,2.77126022639704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66968531419237,22.3230113241526,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55715116387475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,1.1903221573187,0,0,0,0,0,0,0,0,6.59844289612622,2.32862249582209,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr20:41466192..41466207,- | |||
}} |
Revision as of 11:16, 21 January 2014
Short description: | p@chr20:41466192..41466207, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:41466192..41466207, - |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.89e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.94e-37 | 2 |
lower lobe of right lung | 1.30e-19 | 1 |
right lung lobe | 1.30e-19 | 1 |
lower lobe of lung | 1.30e-19 | 1 |
lobe of lung | 1.30e-19 | 1 |
right lung | 1.30e-19 | 1 |
thoracic cavity element | 1.66e-13 | 34 |
thoracic cavity | 1.66e-13 | 34 |
thoracic segment organ | 4.01e-13 | 35 |
respiratory primordium | 4.28e-12 | 38 |
endoderm of foregut | 4.28e-12 | 38 |
trachea | 2.30e-11 | 7 |
respiratory airway | 2.30e-11 | 7 |
uterine epithelium | 1.89e-10 | 2 |
cervix epithelium | 1.89e-10 | 2 |
throat | 3.27e-10 | 2 |
thoracic segment of trunk | 7.46e-09 | 52 |
respiratory tract | 1.58e-08 | 54 |
lung | 4.13e-08 | 22 |
respiratory tube | 4.13e-08 | 22 |
respiration organ | 4.13e-08 | 22 |
pair of lungs | 4.13e-08 | 22 |
lung primordium | 4.13e-08 | 22 |
lung bud | 4.13e-08 | 22 |