FFCP PHASE1:Hg19::chr20:57875644..57875657,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |||
|TSSclassifier=strong | |||
|UniProt=Q4FAT2 | |||
|association_with_transcript=-15bp_to_ENST00000371025_5end | |||
|coexpression_cluster_id=C4056 | |||
|description=CAGE_peak_3_at_EDN3_5end | |||
|id=chr20:57875644..57875657,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.00e-45!115;UBERON:0001049!7.36e-28!57;UBERON:0005068!7.36e-28!57;UBERON:0006241!7.36e-28!57;UBERON:0007135!7.36e-28!57;UBERON:0002616!7.15e-23!59;UBERON:0002780!1.48e-22!41;UBERON:0001890!1.48e-22!41;UBERON:0006240!1.48e-22!41;UBERON:0003075!4.59e-22!86;UBERON:0007284!4.59e-22!86;UBERON:0003080!7.32e-22!42;UBERON:0005743!1.69e-21!86;UBERON:0001017!2.28e-21!82;UBERON:0002346!1.28e-20!90;UBERON:0001893!6.71e-19!34;UBERON:0000073!1.65e-18!94;UBERON:0001016!1.65e-18!94;UBERON:0000955!5.99e-18!69;UBERON:0006238!5.99e-18!69;UBERON:0002791!1.30e-17!33;UBERON:0003056!2.53e-17!61;UBERON:0002020!6.82e-17!34;UBERON:0003528!6.82e-17!34;UBERON:0001869!1.63e-16!32;UBERON:0000153!1.85e-16!129;UBERON:0007811!1.85e-16!129;UBERON:0000033!1.26e-14!123;UBERON:0002619!1.56e-13!22;UBERON:0001950!4.51e-13!20;UBERON:0004121!1.30e-12!169;UBERON:0000924!4.72e-12!173;UBERON:0006601!4.72e-12!173;UBERON:0000956!1.46e-11!25;UBERON:0000203!1.46e-11!25;UBERON:0000481!2.27e-11!347;UBERON:0002420!1.50e-09!9;UBERON:0007245!1.50e-09!9;UBERON:0010009!1.50e-09!9;UBERON:0010011!1.50e-09!9;UBERON:0000454!1.50e-09!9;UBERON:0000062!1.55e-08!511;UBERON:0000922!3.13e-08!612;UBERON:0002298!3.75e-08!8;UBERON:0000475!5.33e-08!365;UBERON:0000064!1.09e-07!219;UBERON:0003076!3.37e-07!15;UBERON:0003057!3.37e-07!15;UBERON:0005409!3.64e-07!35;UBERON:0000160!4.80e-07!27;UBERON:0002050!5.50e-07!605;UBERON:0005423!5.50e-07!605;UBERON:0002308!5.69e-07!9;UBERON:0000125!5.69e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;8.25e-16;33!UBERON:0000160;4.11e-15;17!UBERON:0005409;1.49e-11;22!UBERON:0000007;8.14e-11;2!UBERON:0001829;1.14e-10;2!UBERON:0003127;5.20e-10;2!UBERON:0004089;5.20e-10;2!UBERON:0000341;9.62e-10;2!UBERON:0000922;1.46e-09;49!UBERON:0002108;6.42e-09;4!UBERON:0001044;7.23e-08;6!UBERON:0003293;7.23e-08;6!UBERON:0003294;7.23e-08;6!UBERON:0010047;7.23e-08;6!UBERON:0003408;7.23e-08;6!UBERON:0000167;7.23e-08;6!UBERON:0001555;2.86e-07;54!UBERON:0002298;4.06e-07;6!UBERON:0000059;7.03e-07;11!UBERON:0001896;9.06e-07;3!UBERON:0005290;9.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.58e-15,17;UBERON:0005409,5.69e-13,25;UBERON:0007023,1.21e-11,114;UBERON:0000007,8.55e-11,2;UBERON:0001829,9.87e-11,2;UBERON:0011216,1.64e-10,223;UBERON:0001007,2.86e-10,145;UBERON:0001555,2.86e-10,145;UBERON:0007026,2.86e-10,145;UBERON:0004089,5.84e-10,2;UBERON:0003127,6.11e-10,2;UBERON:0004119,6.31e-10,160;UBERON:0000925,6.31e-10,160;UBERON:0006595,6.31e-10,160;UBERON:0000341,8.80e-10,2;UBERON:0004921,9.63e-10,118;UBERON:0005253,1.44e-09,2;UBERON:0002108,5.68e-09,4;UBERON:0001044,6.83e-08,6;UBERON:0003293,6.83e-08,6;UBERON:0003294,6.83e-08,6;UBERON:0010047,6.83e-08,6;UBERON:0000167,6.83e-08,6;UBERON:0002298,4.58e-07,6;UBERON:0000059,5.91e-07,11;UBERON:0001896,8.29e-07,3;UBERON:0005290,8.29e-07,3;UBERON:0010096,8.29e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0,29.7686825460471,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0,0.591095237907095,0.438770794307945,0,0,3.00106008164809,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40300221437699,0,2.98578579323551,4.77670848318032,0,0,0,0,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0,3.62972148145992,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,3.10364852762942,0,6.10148000107438,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0,0,0,0.668245123238271,0,0.0788057072991982,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.513833800771676,0,0,0.615349092722265,0.756215088665154,0.622415272177961,1.13032951942296,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.540300676947157,0,0,0.317079050969534,0.546974809018219,2.74128883428591,0.992422356778588,0,0,0,0.672567444437648,6.06965604236632,4.09791944432336,0,0,0,1.01954599465248,0.591954962065642,0,0,2.19780659981439,0,0,1.82631744101899,0,0,26.1604151686562,0,0,0.347716544605159,0,0,0,0,11.1859113293272,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,5.34282092365053,0,0,0,5.647304101948,0,0,5.47936522566407,2.40415516554353,0,0,0,0.588925401344836,0,1.2679671827502,0,0.845855261818682,3.80301539044105,0,0,0,0,0,13.7618785021362,0.143339583151451,0,0.951880862672806,0.872701380680755,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,1.0661699095049,1.90451545170992,0,0.248298857183432,0,11.3291941735134,1.21270313374932,0,2.05339980651169,0,1.14755528628282,2.32862249582209,0,0,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p3@EDN3 | |||
}} |
Revision as of 12:32, 21 January 2014
Short description: | p3@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDN3_5end |
Coexpression cluster: | C4056_retina_anaplastic_pituitary_small_salivary_submaxillary_thyroid |
Association with transcript: | -15bp_to_ENST00000371025_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | Q4FAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.58e-15 | 17 |
gastrointestinal system | 5.69e-13 | 25 |
adult organism | 1.21e-11 | 114 |
pituitary gland | 8.55e-11 | 2 |
major salivary gland | 9.87e-11 | 2 |
organ system subdivision | 1.64e-10 | 223 |
digestive system | 2.86e-10 | 145 |
digestive tract | 2.86e-10 | 145 |
primitive gut | 2.86e-10 | 145 |
midface | 5.84e-10 | 2 |
open tracheal system trachea | 6.11e-10 | 2 |
endoderm-derived structure | 6.31e-10 | 160 |
endoderm | 6.31e-10 | 160 |
presumptive endoderm | 6.31e-10 | 160 |
throat | 8.80e-10 | 2 |
subdivision of digestive tract | 9.63e-10 | 118 |
head mesenchyme | 1.44e-09 | 2 |
small intestine | 5.68e-09 | 4 |
saliva-secreting gland | 6.83e-08 | 6 |
gland of oral region | 6.83e-08 | 6 |
gland of foregut | 6.83e-08 | 6 |
oral gland | 6.83e-08 | 6 |
oral cavity | 6.83e-08 | 6 |
brainstem | 4.58e-07 | 6 |
large intestine | 5.91e-07 | 11 |
medulla oblongata | 8.29e-07 | 3 |
myelencephalon | 8.29e-07 | 3 |
future myelencephalon | 8.29e-07 | 3 |