FFCP PHASE1:Hg19::chr21:36260495..36260506,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |||
|TSSclassifier=not | |||
|UniProt=Q01196 | |||
|association_with_transcript=480bp_to_ENST00000344691,ENST00000358356,NM_001001890,NM_001122607,uc002yuh.2,uc002yui.2,uc002yuo.1_5end | |||
|description=CAGE_peak_23_at_RUNX1_5end | |||
|id=chr21:36260495..36260506,- | |||
|ontology_enrichment_celltype=CL:0002057!4.37e-11!42;CL:0000860!1.73e-09!45;CL:0002320!2.33e-08!365;CL:0000134!1.78e-07!358;CL:0000766!1.85e-07!76;CL:0000839!4.62e-07!70;CL:0000557!4.73e-07!71;CL:0000763!5.36e-07!112;CL:0000049!5.36e-07!112;CL:0000219!7.63e-07!390;CL:0002194!9.76e-07!63;CL:0000576!9.76e-07!63;CL:0000040!9.76e-07!63;CL:0000559!9.76e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.45e-16;3!CL:0000860;3.35e-10;33!CL:0002057;3.35e-10;33!CL:0000767;1.20e-07;3!CL:0000473;3.82e-07;39!CL:0000234;3.82e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.56e-17,3;CL:0000766,1.01e-10,72;CL:0000860,3.57e-10,42;CL:0002057,3.57e-10,42;CL:0000557,5.91e-10,67;CL:0000738,3.41e-09,136;CL:0000473,1.12e-08,48;CL:0000234,1.12e-08,48;CL:0000037,1.20e-08,168;CL:0000839,1.51e-08,66;CL:0000763,1.59e-08,108;CL:0000049,1.59e-08,108;CL:0002194,4.10e-08,59;CL:0000576,4.10e-08,59;CL:0000040,4.10e-08,59;CL:0000559,4.10e-08,59;CL:0000988,5.55e-08,177;CL:0000767,7.04e-08,3;CL:0002009,8.72e-08,61;CL:0000134,3.16e-07,354;CL:0002032,3.84e-07,161;CL:0000837,3.84e-07,161;CL:0002320,5.81e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.62e-08!375;UBERON:0002390!1.16e-07!102;UBERON:0003061!1.16e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-10,76;UBERON:0001474,4.42e-09,82;UBERON:0004765,4.95e-08,90;UBERON:0002405,1.10e-07,93;UBERON:0002384,2.61e-07,371;UBERON:0002390,3.72e-07,98;UBERON:0003061,3.72e-07,98;UBERON:0001434,5.85e-07,100 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.866364470720326,0.994192127183747,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,1.96682138424452,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,0,1.00272223735071,0.868043482863407,0,0,0,0,0,0.485168122375632,0,1.23350366406548,0.619412741790207,2.01384674625505,1.7931249457037,1.41889337933151,1.03423704220986,0.645484683583826,0,0.941211697713023,0.545812300115692,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,1.64925650093358,1.19678194572979,0.852449501065388,0.580418477257168,1.70215567407342,0.622822248995575,0.75374599577023,1.0429658368404,0.868755378820466,0,0,0.632924774881769,0.211255286311942,0,0.209658645508376,0.561643155732475,0.300353785683013,0.32145117339416,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,1.68152568894461,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.557052284425868,1.47302953737419,0.443067789167242,1.35401931882508,0.640456598628376,0.520237390239513,0.328875809207352,0,0.579606171470105,0.296573126324121,0,0,0.793165398882963,0,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0.378139268656271,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,0,0,0,5.96226560763355,1.71598473234038,1.85728750664782,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,1.32409180813219,0.573673241497627,0,0,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.618315175430633,1.03056216018252,0.37223371266318,0.506328996723799,0.292311015483596,0.252433774244115,0.552299391853796,0.161646056818812,1.06502877754984,0.503760491138201,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0.201057944823262,0.185176890317059,0.977424915930974,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,2.46331618947972,0.968532774145487,0,0,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0.271265023699736,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.521301686808497,0.391602314925481,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0.460385919864187,0,0.384417447767103,1.53512174720011,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,1.6068392984416,0.676695028044854,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,1.15741646340759,0.165284915360978,0,0.510450849978337,0.50578890427775,0,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0.735120647943095,0,0,0.0711418433484141,0.159426272728822,0,0.383010740264733,0,0.324621940274555,0,0.456469358066384,0.156679895773023,5.01268954180134,0,0.321176150207399,0.201799707191048,0,0,0,0.671028323677248,0.333698283423817,0,0.556812347790485,0,0.270455678475983,0.99921590399346,0,0,0.293016358543788,0,0.334330152832435,0,0,0,0,0,0,0.667852230137435,0.494411622680279,0,0.19924798825107,0,0,0.409074730008619,0.246169610922139,0.311039587661807,0,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0,0,1.04171104434093,0.524759999977174,0.724999575434793,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p23@RUNX1 | |||
}} |
Revision as of 13:34, 21 January 2014
Short description: | p23@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 480bp_to_ENST00000344691, ENST00000358356, NM_001001890, NM_001122607, uc002yuh.2, uc002yui.2, uc002yuo.1_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.56e-17 | 3 |
myeloid leukocyte | 1.01e-10 | 72 |
classical monocyte | 3.57e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-10 | 42 |
granulocyte monocyte progenitor cell | 5.91e-10 | 67 |
leukocyte | 3.41e-09 | 136 |
defensive cell | 1.12e-08 | 48 |
phagocyte | 1.12e-08 | 48 |
hematopoietic stem cell | 1.20e-08 | 168 |
myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
myeloid cell | 1.59e-08 | 108 |
common myeloid progenitor | 1.59e-08 | 108 |
monopoietic cell | 4.10e-08 | 59 |
monocyte | 4.10e-08 | 59 |
monoblast | 4.10e-08 | 59 |
promonocyte | 4.10e-08 | 59 |
hematopoietic cell | 5.55e-08 | 177 |
basophil | 7.04e-08 | 3 |
macrophage dendritic cell progenitor | 8.72e-08 | 61 |
mesenchymal cell | 3.16e-07 | 354 |
hematopoietic oligopotent progenitor cell | 3.84e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.84e-07 | 161 |
connective tissue cell | 5.81e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.15e-10 | 76 |
bone element | 4.42e-09 | 82 |
skeletal element | 4.95e-08 | 90 |
immune system | 1.10e-07 | 93 |
connective tissue | 2.61e-07 | 371 |
hematopoietic system | 3.72e-07 | 98 |
blood island | 3.72e-07 | 98 |
skeletal system | 5.85e-07 | 100 |