FFCP PHASE1:Hg19::chr2:108602885..108602901,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14025 | |||
|TSSclassifier=strong | |||
|UniProt=Q9GZV3 | |||
|association_with_transcript=-77bp_to_ENST00000409059_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_SLC5A7_5end | |||
|id=chr2:108602885..108602901,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.36e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;4.27e-34;1!CL:0002188;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.61e-34,1;CL:0002188,7.01e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-24!57;UBERON:0005068!2.05e-24!57;UBERON:0006241!2.05e-24!57;UBERON:0007135!2.05e-24!57;UBERON:0001017!1.74e-22!82;UBERON:0005743!2.88e-21!86;UBERON:0000073!6.86e-19!94;UBERON:0001016!6.86e-19!94;UBERON:0002616!5.98e-18!59;UBERON:0003076!8.54e-18!15;UBERON:0003057!8.54e-18!15;UBERON:0002298!9.57e-18!8;UBERON:0001896!1.44e-17!3;UBERON:0005290!1.44e-17!3;UBERON:0010096!1.44e-17!3;UBERON:0003075!3.91e-17!86;UBERON:0007284!3.91e-17!86;UBERON:0007023!1.02e-16!115;UBERON:0002346!3.29e-16!90;UBERON:0002308!2.16e-15!9;UBERON:0000125!2.16e-15!9;UBERON:0000955!1.12e-14!69;UBERON:0006238!1.12e-14!69;UBERON:0001905!4.14e-13!2;UBERON:0002757!4.14e-13!2;UBERON:0010134!4.14e-13!2;UBERON:0002784!4.14e-13!2;UBERON:0005408!4.14e-13!2;UBERON:0001899!4.14e-13!2;UBERON:0002148!1.05e-12!2;UBERON:0009662!1.05e-12!2;UBERON:0004733!9.31e-12!12;UBERON:0002028!9.31e-12!12;UBERON:0007277!9.31e-12!12;UBERON:0000025!1.41e-11!194;UBERON:0002780!1.42e-11!41;UBERON:0001890!1.42e-11!41;UBERON:0006240!1.42e-11!41;UBERON:0002020!1.72e-11!34;UBERON:0003528!1.72e-11!34;UBERON:0003080!2.90e-11!42;UBERON:0004121!4.72e-11!169;UBERON:0004732!7.80e-11!13;UBERON:0000924!1.07e-10!173;UBERON:0006601!1.07e-10!173;UBERON:0004111!2.78e-09!241;UBERON:0000988!9.43e-09!3;UBERON:0006331!9.43e-09!3;UBERON:0002240!1.54e-08!3;UBERON:0000033!4.22e-08!123;UBERON:0001894!5.31e-08!7;UBERON:0006222!5.31e-08!7;UBERON:0000153!1.39e-07!129;UBERON:0007811!1.39e-07!129;UBERON:0009663!1.55e-07!7;UBERON:0001869!2.16e-07!32;UBERON:0003056!2.83e-07!61;UBERON:0002791!3.78e-07!33;UBERON:0000477!5.12e-07!286;UBERON:0003296!5.86e-07!4;UBERON:0010133!5.86e-07!4;UBERON:0001893!6.40e-07!34;UBERON:0000483!6.69e-07!309;UBERON:0000119!8.76e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0001894;5.35e-20;7!UBERON:0002148;8.34e-18;2!UBERON:0006331;8.34e-18;2!UBERON:0009662;8.34e-18;2!UBERON:0000988;2.45e-12;3!UBERON:0002114;3.06e-12;2!UBERON:0002108;7.25e-08;4!UBERON:0002298;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0002148,9.07e-18,2;UBERON:0006331,9.07e-18,2;UBERON:0009662,9.07e-18,2;UBERON:0000988,2.59e-12,3;UBERON:0002114,3.24e-12,2;UBERON:0002108,7.49e-08,4;UBERON:0002298,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,37.4991285114801,27.5752652219436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC5A7 | |||
}} |
Revision as of 04:49, 21 January 2014
Short description: | p4@SLC5A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC5A7_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -77bp_to_ENST00000409059_5end |
EntrezGene: | SLC5A7 |
HGNC: | 14025 |
UniProt: | Q9GZV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.61e-34 | 1 |
glomerular endothelial cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
locus ceruleus | 9.07e-18 | 2 |
brainstem nucleus | 9.07e-18 | 2 |
hindbrain nucleus | 9.07e-18 | 2 |
pons | 2.59e-12 | 3 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
brainstem | 8.48e-07 | 6 |