FFCP PHASE1:Mm9::chr10:128185807..128185839,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=108|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128185807..128185839,+|id=chr10:128185807..128185839,+|ontology_enrichment_celltype=CL:0000540!1.10e-12!33;CL:0000047!1.10e-12!33;CL:0000031!1.10e-12!33;CL:0000404!1.10e-12!33;CL:0000221!1.07e-11!44;CL:0000133!1.07e-11!44;CL:0002319!1.75e-11!43;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000117!7.11e-09!23;CL:0000337!7.11e-09!23;CL:0000055!1.66e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-18,33;CL:0000047,2.57e-18,33;CL:0000031,2.57e-18,33;CL:0000404,2.57e-18,33;CL:0002319,3.56e-14,43;CL:0000393,4.95e-14,39;CL:0000211,4.95e-14,39;CL:0000221,1.25e-13,44;CL:0000133,1.25e-13,44;CL:0000117,2.51e-13,23;CL:0000337,2.51e-13,23;CL:0002609,9.00e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.12e-11!73;UBERON:0005743!3.12e-11!73;UBERON:0000073!6.71e-11!75;UBERON:0001016!6.71e-11!75;UBERON:0002346!1.12e-10!71;UBERON:0003075!1.12e-10!71;UBERON:0007284!1.12e-10!71;UBERON:0004121!1.44e-10!102;UBERON:0000924!1.44e-10!102;UBERON:0006601!1.44e-10!102;UBERON:0000153!3.51e-10!94;UBERON:0007811!6.00e-08!86;UBERON:0003056!1.56e-07!49;UBERON:0000033!1.60e-07!63;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-12,64;UBERON:0003075,1.04e-12,64;UBERON:0007284,1.04e-12,64;UBERON:0001017,4.00e-12,73;UBERON:0004121,1.32e-11,95;UBERON:0000924,1.32e-11,95;UBERON:0006601,1.32e-11,95;UBERON:0001016,1.79e-11,75;UBERON:0010371,1.72e-10,73;UBERON:0003056,3.03e-09,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0010314,1.57e-07,92;UBERON:0002020,1.84e-07,34;UBERON:0000073,3.75e-07,54|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0.140788722151667,0,0.513653904676515,0.398860794976682,0,0.174840804837995,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,3.12956537739216,0.436050312760893,0.659058548203415,0.777719596297134,0.839918529752175,0,0.167782606057736,0,0,0,0,0,5.46254444320914,4.7609188134483,3.80298842103708,0.338844532069132,0,0,0,0,0,1.15265491596466,3.83651565541367,3.10513658162888,2.94454945891935,2.85650984403804,2.87129103237098,3.30725157880376,4.31304619582064,8.27296907949019,0,0.383062014255563,0.153606533256243,3.95658863190582,7.13603620098795,3.12548022334056,0.279182999001381,1.12552522006336,0,2.94628585473668,1.42371680799103,3.16879057903011,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,2.54805239706646,0,0.432982082022428,0,0,0,0.258937883647172,0.29688427812965,1.04091196059682,1.21786191324856,0,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0.485300549842228,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0.599902730993408,0,0.299581278809645,0.457500602818626,4.27224797183739,0.521472960576829,0,0.83115217823824,0.973447578406546,0.712875546952214,0,0,0,3.513251959993,2.75882525320168,2.34080768746954,1.80845781402858,1.49680298132921,1.66547836370305,1.68663104207512,0.258703370739016,2.58681591519411,2.64748512234947,5.10258260075452,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0.420579897128254,4.73361216944708,0,0,2.98603550749328,1.62565670302307,1.03093969057675,0.80673409849337,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0,0.898819408654221,0,0,2.0863469104839,1.48523066392647,0,1.22190796707189,1.55161989734101,0.631222379012867,0.252946148497029,0,0,0,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,2.4633883530163,0.651859905768103,1.35796068620151,0.938760993154008,0.837531287209079,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0,1.50791283939272,0,0,0,0.481651769963376,0.468846746368813,0.655739781506702,0,1.89304931649754,1.56175497718655,2.58508077279359,1.19484398976276,2.45078541490634,1.13230612315533,1.21443210502468,0.876767573733936,2.76701444562566,0.642642632843614,0.283880170416537,1.24645922567079,1.14020871547503,0.329940245945071,0,1.69946445308487,2.11626489875326,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,2.34079422240703,4.52755393239641,3.21505552547388,2.12808280370728,1.07021290561242,2.30368628842969,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,1.65109494370578,0.555583582109135,0,0.1366942277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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:128185807..128185839,+ | |||
|description=CAGE_peak_at_chr10:128185807..128185839,+ | |||
|id=chr10:128185807..128185839,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.10e-12!33;CL:0000047!1.10e-12!33;CL:0000031!1.10e-12!33;CL:0000404!1.10e-12!33;CL:0000221!1.07e-11!44;CL:0000133!1.07e-11!44;CL:0002319!1.75e-11!43;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000117!7.11e-09!23;CL:0000337!7.11e-09!23;CL:0000055!1.66e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-18,33;CL:0000047,2.57e-18,33;CL:0000031,2.57e-18,33;CL:0000404,2.57e-18,33;CL:0002319,3.56e-14,43;CL:0000393,4.95e-14,39;CL:0000211,4.95e-14,39;CL:0000221,1.25e-13,44;CL:0000133,1.25e-13,44;CL:0000117,2.51e-13,23;CL:0000337,2.51e-13,23;CL:0002609,9.00e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.12e-11!73;UBERON:0005743!3.12e-11!73;UBERON:0000073!6.71e-11!75;UBERON:0001016!6.71e-11!75;UBERON:0002346!1.12e-10!71;UBERON:0003075!1.12e-10!71;UBERON:0007284!1.12e-10!71;UBERON:0004121!1.44e-10!102;UBERON:0000924!1.44e-10!102;UBERON:0006601!1.44e-10!102;UBERON:0000153!3.51e-10!94;UBERON:0007811!6.00e-08!86;UBERON:0003056!1.56e-07!49;UBERON:0000033!1.60e-07!63;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-12,64;UBERON:0003075,1.04e-12,64;UBERON:0007284,1.04e-12,64;UBERON:0001017,4.00e-12,73;UBERON:0004121,1.32e-11,95;UBERON:0000924,1.32e-11,95;UBERON:0006601,1.32e-11,95;UBERON:0001016,1.79e-11,75;UBERON:0010371,1.72e-10,73;UBERON:0003056,3.03e-09,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0010314,1.57e-07,92;UBERON:0002020,1.84e-07,34;UBERON:0000073,3.75e-07,54 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0.140788722151667,0,0.513653904676515,0.398860794976682,0,0.174840804837995,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,3.12956537739216,0.436050312760893,0.659058548203415,0.777719596297134,0.839918529752175,0,0.167782606057736,0,0,0,0,0,5.46254444320914,4.7609188134483,3.80298842103708,0.338844532069132,0,0,0,0,0,1.15265491596466,3.83651565541367,3.10513658162888,2.94454945891935,2.85650984403804,2.87129103237098,3.30725157880376,4.31304619582064,8.27296907949019,0,0.383062014255563,0.153606533256243,3.95658863190582,7.13603620098795,3.12548022334056,0.279182999001381,1.12552522006336,0,2.94628585473668,1.42371680799103,3.16879057903011,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,2.54805239706646,0,0.432982082022428,0,0,0,0.258937883647172,0.29688427812965,1.04091196059682,1.21786191324856,0,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0.485300549842228,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0.599902730993408,0,0.299581278809645,0.457500602818626,4.27224797183739,0.521472960576829,0,0.83115217823824,0.973447578406546,0.712875546952214,0,0,0,3.513251959993,2.75882525320168,2.34080768746954,1.80845781402858,1.49680298132921,1.66547836370305,1.68663104207512,0.258703370739016,2.58681591519411,2.64748512234947,5.10258260075452,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0.420579897128254,4.73361216944708,0,0,2.98603550749328,1.62565670302307,1.03093969057675,0.80673409849337,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0,0.898819408654221,0,0,2.0863469104839,1.48523066392647,0,1.22190796707189,1.55161989734101,0.631222379012867,0.252946148497029,0,0,0,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,2.4633883530163,0.651859905768103,1.35796068620151,0.938760993154008,0.837531287209079,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0,1.50791283939272,0,0,0,0.481651769963376,0.468846746368813,0.655739781506702,0,1.89304931649754,1.56175497718655,2.58508077279359,1.19484398976276,2.45078541490634,1.13230612315533,1.21443210502468,0.876767573733936,2.76701444562566,0.642642632843614,0.283880170416537,1.24645922567079,1.14020871547503,0.329940245945071,0,1.69946445308487,2.11626489875326,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,2.34079422240703,4.52755393239641,3.21505552547388,2.12808280370728,1.07021290561242,2.30368628842969,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,1.65109494370578,0.555583582109135,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,3.47969592939249,0.609958401380546,0.972048067396211,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0.621339313086926,0,1.34564891439581,1.48912641411388,0.777804753376191,1.16243841129958,1.35164900392623,0.704143431874524,0.5208175393758,0.209718688851422,0.241584120826006,0,0.632022241256357,1.01362607645082,0.718976700153791,0,0.358053391334963,1.39076948346885,0.721172697119813,0.590758108698309,1.21159739937777,1.21930890648,1.10908803650525,0.877120926657772,1.05833025804362,0.818138315270983,0,0,0.448569283047378,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,1.3748254587495,0,0.755393897389701,0,0,0,1.03552062350364,2.90604573235695,2.39414924040619,2.90247129782028,1.70174701947806,2.30574478890781,1.2869045591501,0.666740183404846,1.03017528619447,0,1.26348605881899,0.50695859978048,0.754505365544305,0.936415074698824,0.960377286073039,1.26358031702349,0.476293691283074,0.811190281613988,1.15745532278223,0.824171801606613,0.441596760403192,0,1.24233064311536,0.953744759789284,0.581385666529314,1.03520318456864,0.676916863133412,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,0.711810108745045,0.394017929502254,1.22769312950907,0.309873682371932,0.578719832943424,2.49810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr10:128185807..128185839,+ | |||
}} |
Latest revision as of 03:18, 4 August 2015
Short description: | p@chr10:128185807..128185839, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128185807..128185839, + |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.57e-18 | 33 |
neuronal stem cell | 2.57e-18 | 33 |
neuroblast | 2.57e-18 | 33 |
electrically signaling cell | 2.57e-18 | 33 |
neural cell | 3.56e-14 | 43 |
electrically responsive cell | 4.95e-14 | 39 |
electrically active cell | 4.95e-14 | 39 |
ectodermal cell | 1.25e-13 | 44 |
neurectodermal cell | 1.25e-13 | 44 |
CNS neuron (sensu Vertebrata) | 2.51e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-13 | 23 |
neuron of cerebral cortex | 9.00e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.04e-12 | 64 |
neural plate | 1.04e-12 | 64 |
presumptive neural plate | 1.04e-12 | 64 |
central nervous system | 4.00e-12 | 73 |
ectoderm-derived structure | 1.32e-11 | 95 |
ectoderm | 1.32e-11 | 95 |
presumptive ectoderm | 1.32e-11 | 95 |
nervous system | 1.79e-11 | 75 |
ecto-epithelium | 1.72e-10 | 73 |
pre-chordal neural plate | 3.03e-09 | 49 |
neural tube | 1.00e-07 | 52 |
neural rod | 1.00e-07 | 52 |
future spinal cord | 1.00e-07 | 52 |
neural keel | 1.00e-07 | 52 |
structure with developmental contribution from neural crest | 1.57e-07 | 92 |
gray matter | 1.84e-07 | 34 |
regional part of nervous system | 3.75e-07 | 54 |