FFCP PHASE1:Mm9::chr10:67560323..67560365,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:67560323..67560365,-|id=chr10:67560323..67560365,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.00e-23,3;CL:0000359,2.00e-23,3;CL:0002539,2.00e-23,3;CL:0000514,2.00e-23,3;CL:0000680,4.86e-12,6;CL:0000187,4.86e-12,6;CL:0000056,4.86e-12,6;CL:0000222,2.11e-10,7;CL:0000355,3.29e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.00e-23,3;UBERON:0004237,2.00e-23,3;UBERON:0004695,2.00e-23,3;UBERON:0002111,2.00e-23,3;UBERON:0004178,2.00e-23,3;UBERON:0000947,9.59e-18,4;UBERON:0001637,9.59e-18,4;UBERON:0004573,9.59e-18,4;UBERON:0003509,9.59e-18,4;UBERON:0004571,9.59e-18,4;UBERON:0010191,9.59e-18,4;UBERON:0004572,9.59e-18,4;UBERON:0000055,2.52e-14,5;UBERON:0007500,2.52e-14,5;UBERON:0001981,2.52e-14,5;UBERON:0002049,2.52e-14,5;UBERON:0007798,2.52e-14,5;UBERON:0004537,2.52e-14,5;UBERON:0006965,2.52e-14,5;UBERON:0000305,1.24e-08,1;UBERON:0001134,3.29e-08,9;UBERON:0002036,3.29e-08,9;UBERON:0002385,3.29e-08,9;UBERON:0000486,3.29e-08,9;UBERON:0007503,3.29e-08,9;UBERON:0001015,3.29e-08,9;UBERON:0002329,3.29e-08,9;UBERON:0003082,3.29e-08,9;UBERON:0003059,3.29e-08,9;UBERON:0007282,3.29e-08,9;UBERON:0004290,3.29e-08,9;UBERON:0009618,3.29e-08,9;UBERON:0000383,1.94e-07,10;UBERON:0007524,8.31e-07,11;UBERON:0003077,8.31e-07,11;UBERON:0007285,8.31e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,4.40638862914521,4.66333883609767,1.65192076945513,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0,1.77858959222228,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,1.48316980640624,0.578397427679647,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,0.431135985865684,0,0.175951124163949,1.31517439456545,0,0.696504333044333,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0.308534225774757,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0,0,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.189709611372772,0,0,0.370191491765402,0,0,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,2.87536413054709,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0.335012514883631,0.952174563544055,1.36593553500459,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0,1.77610869365496,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0.269141569828427,0,0,0.375364950902364,0.549454872801795,0.428736758158132,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.701794825336225,1.28922632428979,0.57386499620653,1.10295709559758,0.231867835620421|short_description=p@chr10:67560323..67560365,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:67560323..67560365,- | |||
|description=CAGE_peak_at_chr10:67560323..67560365,- | |||
|id=chr10:67560323..67560365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.00e-23,3;CL:0000359,2.00e-23,3;CL:0002539,2.00e-23,3;CL:0000514,2.00e-23,3;CL:0000680,4.86e-12,6;CL:0000187,4.86e-12,6;CL:0000056,4.86e-12,6;CL:0000222,2.11e-10,7;CL:0000355,3.29e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.00e-23,3;UBERON:0004237,2.00e-23,3;UBERON:0004695,2.00e-23,3;UBERON:0002111,2.00e-23,3;UBERON:0004178,2.00e-23,3;UBERON:0000947,9.59e-18,4;UBERON:0001637,9.59e-18,4;UBERON:0004573,9.59e-18,4;UBERON:0003509,9.59e-18,4;UBERON:0004571,9.59e-18,4;UBERON:0010191,9.59e-18,4;UBERON:0004572,9.59e-18,4;UBERON:0000055,2.52e-14,5;UBERON:0007500,2.52e-14,5;UBERON:0001981,2.52e-14,5;UBERON:0002049,2.52e-14,5;UBERON:0007798,2.52e-14,5;UBERON:0004537,2.52e-14,5;UBERON:0006965,2.52e-14,5;UBERON:0000305,1.24e-08,1;UBERON:0001134,3.29e-08,9;UBERON:0002036,3.29e-08,9;UBERON:0002385,3.29e-08,9;UBERON:0000486,3.29e-08,9;UBERON:0007503,3.29e-08,9;UBERON:0001015,3.29e-08,9;UBERON:0002329,3.29e-08,9;UBERON:0003082,3.29e-08,9;UBERON:0003059,3.29e-08,9;UBERON:0007282,3.29e-08,9;UBERON:0004290,3.29e-08,9;UBERON:0009618,3.29e-08,9;UBERON:0000383,1.94e-07,10;UBERON:0007524,8.31e-07,11;UBERON:0003077,8.31e-07,11;UBERON:0007285,8.31e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,4.40638862914521,4.66333883609767,1.65192076945513,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0,1.77858959222228,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,1.48316980640624,0.578397427679647,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,0.431135985865684,0,0.175951124163949,1.31517439456545,0,0.696504333044333,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0.308534225774757,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0,0,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.189709611372772,0,0,0.370191491765402,0,0,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,2.87536413054709,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0.335012514883631,0.952174563544055,1.36593553500459,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0,1.77610869365496,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0,0,0.453460767230423,0,0.269141569828427,0,0,0.375364950902364,0.549454872801795,0.428736758158132,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.701794825336225,1.28922632428979,0.57386499620653,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr10:67560323..67560365,- | |||
}} |
Latest revision as of 15:10, 4 August 2015
Short description: | p@chr10:67560323..67560365, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:67560323..67560365, - |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.00e-23 | 3 |
vascular associated smooth muscle cell | 2.00e-23 | 3 |
aortic smooth muscle cell | 2.00e-23 | 3 |
smooth muscle myoblast | 2.00e-23 | 3 |
muscle precursor cell | 4.86e-12 | 6 |
muscle cell | 4.86e-12 | 6 |
myoblast | 4.86e-12 | 6 |
mesodermal cell | 2.11e-10 | 7 |
multi-potent skeletal muscle stem cell | 3.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.00e-23 | 3 |
blood vessel smooth muscle | 2.00e-23 | 3 |
arterial system smooth muscle | 2.00e-23 | 3 |
artery smooth muscle tissue | 2.00e-23 | 3 |
aorta smooth muscle tissue | 2.00e-23 | 3 |
aorta | 9.59e-18 | 4 |
artery | 9.59e-18 | 4 |
systemic artery | 9.59e-18 | 4 |
arterial blood vessel | 9.59e-18 | 4 |
systemic arterial system | 9.59e-18 | 4 |
aortic system | 9.59e-18 | 4 |
arterial system | 9.59e-18 | 4 |
vessel | 2.52e-14 | 5 |
epithelial tube open at both ends | 2.52e-14 | 5 |
blood vessel | 2.52e-14 | 5 |
vasculature | 2.52e-14 | 5 |
vascular system | 2.52e-14 | 5 |
blood vasculature | 2.52e-14 | 5 |
vascular cord | 2.52e-14 | 5 |
amnion | 1.24e-08 | 1 |
skeletal muscle tissue | 3.29e-08 | 9 |
striated muscle tissue | 3.29e-08 | 9 |
muscle tissue | 3.29e-08 | 9 |
multilaminar epithelium | 3.29e-08 | 9 |
epithelial vesicle | 3.29e-08 | 9 |
musculature | 3.29e-08 | 9 |
somite | 3.29e-08 | 9 |
myotome | 3.29e-08 | 9 |
presomitic mesoderm | 3.29e-08 | 9 |
presumptive segmental plate | 3.29e-08 | 9 |
dermomyotome | 3.29e-08 | 9 |
trunk paraxial mesoderm | 3.29e-08 | 9 |
musculature of body | 1.94e-07 | 10 |
dense mesenchyme tissue | 8.31e-07 | 11 |
paraxial mesoderm | 8.31e-07 | 11 |
presumptive paraxial mesoderm | 8.31e-07 | 11 |