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FFCP PHASE1:Mm9::chr11:120442851..120442862,-: Difference between revisions

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{{FFCP|EntrezGene=192662|HGNC=|UniProt=Q99PT1|association_with_transcript=71bp_to_NM_133796,uc007mtk.2_5end|description=CAGE_peak_3_at_Arhgdia_5end|id=chr11:120442851..120442862,-|ontology_enrichment_celltype=CL:0000055!4.71e-14!50;CL:0002319!3.38e-13!43;CL:0000221!2.50e-12!44;CL:0000133!2.50e-12!44;CL:0000393!2.41e-09!39;CL:0000211!2.41e-09!39;CL:0000540!5.61e-08!33;CL:0000047!5.61e-08!33;CL:0000031!5.61e-08!33;CL:0000404!5.61e-08!33;CL:0002321!1.50e-07!70;CL:0000220!1.50e-07!70;CL:0000548!4.65e-07!115;CL:0000004!4.65e-07!115;CL:0000255!4.65e-07!115;CL:0000333!5.02e-07!10;CL:0000095!5.02e-07!10;CL:0000243!5.02e-07!10;CL:0000123!5.02e-07!10;CL:0000125!5.02e-07!10;CL:0000030!5.02e-07!10;CL:0000339!5.02e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,3.27e-13,43;CL:0000221,2.42e-12,44;CL:0000133,2.42e-12,44;CL:0000393,2.36e-09,39;CL:0000211,2.36e-09,39;CL:0000540,5.50e-08,33;CL:0000047,5.50e-08,33;CL:0000031,5.50e-08,33;CL:0000404,5.50e-08,33;CL:0002321,9.74e-08,70;CL:0000333,4.94e-07,10;CL:0000095,4.94e-07,10;CL:0000243,4.94e-07,10;CL:0000123,4.94e-07,10;CL:0000125,4.94e-07,10;CL:0000030,4.94e-07,10;CL:0000339,4.94e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.26e-15!75;UBERON:0001016!4.26e-15!75;UBERON:0001017!6.07e-14!73;UBERON:0005743!6.07e-14!73;UBERON:0004121!4.59e-09!102;UBERON:0000924!4.59e-09!102;UBERON:0006601!4.59e-09!102;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.09e-15,75;UBERON:0001017,5.85e-14,73;UBERON:0004121,1.33e-09,95;UBERON:0000924,1.33e-09,95;UBERON:0006601,1.33e-09,95;UBERON:0000073,5.53e-08,54;UBERON:0001049,1.12e-07,52;UBERON:0005068,1.12e-07,52;UBERON:0006241,1.12e-07,52;UBERON:0007135,1.12e-07,52;UBERON:0002346,3.59e-07,64;UBERON:0003075,3.59e-07,64;UBERON:0007284,3.59e-07,64|phase1_expression=1.28119077683835,1.39590163055744,1.81999695755814,3.93203474698879,0.500895729946347,1.17515490338323,1.86890112476421,1.03298658753261,2.53419699873,2.57470978954193,1.88339765048055,0.717949430958028,0.513602189793617,0.874204024189974,1.99865857089398,1.01237633694913,2.09868563438444,3.15462165358238,3.29074640653773,1.69755860719212,1.87095238332354,1.58865521921416,2.35079810225042,3.19984845586813,4.12936705920906,0,0.430761996159075,2.15471232685889,4.3705386474966,1.26015064879965,1.10865255327652,2.54012269383853,6.1506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,0.588231488031014,0,0,2.14024590558481,2.43304634926835,5.87349606917381,16.4302182313088,5.45062890951116,5.93152693383074,5.24960727500565,5.45947044338914,7.18762821824858,4.53013036355888,1.45072428402269,4.03312558970957,8.7468208252222,4.58453503902011,6.70373719960675,5.66486090406874,6.87688273053643,8.87363964908651,11.1818695582814,5.33576877666684,13.9484456178617,6.92206453796882,9.2362414942993,8.08920298399693,11.9107674649682,2.17748185847803,1.35005938331691,3.57552434297349,9.99778445413313,10.8225585066291,2.81728838194394,3.54628242767475,1.83843757322004,2.20231761998777,5.61824287574826,5.68344173048101,6.19865552331911,10.0636407962651,1.56274011167028,7.53794097303729,7.31591393041184,7.63991238884051,4.12480019663135,6.69146899755784,4.65998614563251,8.40560745998343,8.76630097238712,2.02905142091174,1.72084775396277,2.719885334831,0.539703191637817,0,1.34408066129201,2.10666630197628,4.4311883870295,3.89679006904303,7.77347063922748,1.12674735821344,6.41632387071589,5.09610479413291,0,3.46385665617943,3.29367825117628,6.0662933401774,1.37020655662872,2.84831672011889,3.85949561568544,4.16364784238726,1.82679286987285,1.61430848079241,2.41156224884196,2.11659672844269,1.63366568728578,3.95511948374998,1.3013942122792,0.884610551949874,2.42650274921114,1.54589062922275,2.42437626567611,1.86391761218122,2.04946557908083,1.46612694769419,1.27728527604296,2.63593273913025,4.19931911695385,2.03312363316904,5.24267237916879,3.66000482254901,3.39266750704734,3.99795936442236,2.30143911597297,4.57133698031032,3.40706652442291,2.95334155165917,1.7416975885413,2.0217820674694,1.26265113531884,2.73252930221678,5.74755261083682,5.40186389416048,2.26057226753573,1.7009124787832,1.2811372028485,2.06143794031403,0.776110112217047,4.74249584452253,3.40390944302075,3.51902248327898,3.94552318369635,1.39023624612799,3.48252166522167,0.823128545631774,2.7864797354589,2.80885274925294,2.83082697826187,4.26245249093389,3.31401236056803,1.17263029990548,2.52086886045421,2.84093682702252,2.36117078096885,3.08534225774756,2.55787339225449,1.3413670069981,2.45207218971056,2.13927804887525,1.47750717671186,0.891756905004413,1.31579988682799,1.53685080703735,0.939444931322602,4.20579897128254,2.98423375899925,1.98251269790279,2.90895623329899,1.91959425481711,3.25131340604614,2.70621668776396,3.83198696784351,3.11329261382818,4.37518940058886,0.474529061544512,5.10566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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:192662
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q99PT1
|association_with_transcript=71bp_to_NM_133796,uc007mtk.2_5end
|cluster_id=chr11:120442851..120442862,-
|description=CAGE_peak_3_at_Arhgdia_5end
|id=chr11:120442851..120442862,-
|ontology_enrichment_celltype=CL:0000055!4.71e-14!50;CL:0002319!3.38e-13!43;CL:0000221!2.50e-12!44;CL:0000133!2.50e-12!44;CL:0000393!2.41e-09!39;CL:0000211!2.41e-09!39;CL:0000540!5.61e-08!33;CL:0000047!5.61e-08!33;CL:0000031!5.61e-08!33;CL:0000404!5.61e-08!33;CL:0002321!1.50e-07!70;CL:0000220!1.50e-07!70;CL:0000548!4.65e-07!115;CL:0000004!4.65e-07!115;CL:0000255!4.65e-07!115;CL:0000333!5.02e-07!10;CL:0000095!5.02e-07!10;CL:0000243!5.02e-07!10;CL:0000123!5.02e-07!10;CL:0000125!5.02e-07!10;CL:0000030!5.02e-07!10;CL:0000339!5.02e-07!10
|ontology_enrichment_celltype_v019_2=CL:0002319,3.27e-13,43;CL:0000221,2.42e-12,44;CL:0000133,2.42e-12,44;CL:0000393,2.36e-09,39;CL:0000211,2.36e-09,39;CL:0000540,5.50e-08,33;CL:0000047,5.50e-08,33;CL:0000031,5.50e-08,33;CL:0000404,5.50e-08,33;CL:0002321,9.74e-08,70;CL:0000333,4.94e-07,10;CL:0000095,4.94e-07,10;CL:0000243,4.94e-07,10;CL:0000123,4.94e-07,10;CL:0000125,4.94e-07,10;CL:0000030,4.94e-07,10;CL:0000339,4.94e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.26e-15!75;UBERON:0001016!4.26e-15!75;UBERON:0001017!6.07e-14!73;UBERON:0005743!6.07e-14!73;UBERON:0004121!4.59e-09!102;UBERON:0000924!4.59e-09!102;UBERON:0006601!4.59e-09!102;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.09e-15,75;UBERON:0001017,5.85e-14,73;UBERON:0004121,1.33e-09,95;UBERON:0000924,1.33e-09,95;UBERON:0006601,1.33e-09,95;UBERON:0000073,5.53e-08,54;UBERON:0001049,1.12e-07,52;UBERON:0005068,1.12e-07,52;UBERON:0006241,1.12e-07,52;UBERON:0007135,1.12e-07,52;UBERON:0002346,3.59e-07,64;UBERON:0003075,3.59e-07,64;UBERON:0007284,3.59e-07,64
|phase1_expression=1.28119077683835,1.39590163055744,1.81999695755814,3.93203474698879,0.500895729946347,1.17515490338323,1.86890112476421,1.03298658753261,2.53419699873,2.57470978954193,1.88339765048055,0.717949430958028,0.513602189793617,0.874204024189974,1.99865857089398,1.01237633694913,2.09868563438444,3.15462165358238,3.29074640653773,1.69755860719212,1.87095238332354,1.58865521921416,2.35079810225042,3.19984845586813,4.12936705920906,0,0.430761996159075,2.15471232685889,4.3705386474966,1.26015064879965,1.10865255327652,2.54012269383853,6.1506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,0.588231488031014,0,0,2.14024590558481,2.43304634926835,5.87349606917381,16.4302182313088,5.45062890951116,5.93152693383074,5.24960727500565,5.45947044338914,7.18762821824858,4.53013036355888,1.45072428402269,4.03312558970957,8.7468208252222,4.58453503902011,6.70373719960675,5.66486090406874,6.87688273053643,8.87363964908651,11.1818695582814,5.33576877666684,13.9484456178617,6.92206453796882,9.2362414942993,8.08920298399693,11.9107674649682,2.17748185847803,1.35005938331691,3.57552434297349,9.99778445413313,10.8225585066291,2.81728838194394,3.54628242767475,1.83843757322004,2.20231761998777,5.61824287574826,5.68344173048101,6.19865552331911,10.0636407962651,1.56274011167028,7.53794097303729,7.31591393041184,7.63991238884051,4.12480019663135,6.69146899755784,4.65998614563251,8.40560745998343,8.76630097238712,2.02905142091174,1.72084775396277,2.719885334831,0.539703191637817,0,1.34408066129201,2.10666630197628,4.4311883870295,3.89679006904303,7.77347063922748,1.12674735821344,6.41632387071589,5.09610479413291,0,3.46385665617943,3.29367825117628,6.0662933401774,1.37020655662872,2.84831672011889,3.85949561568544,4.16364784238726,1.82679286987285,1.61430848079241,2.41156224884196,2.11659672844269,1.63366568728578,3.95511948374998,1.3013942122792,0.884610551949874,2.42650274921114,1.54589062922275,2.42437626567611,1.86391761218122,2.04946557908083,1.46612694769419,1.27728527604296,2.63593273913025,4.19931911695385,2.03312363316904,5.24267237916879,3.66000482254901,3.39266750704734,3.99795936442236,2.30143911597297,4.57133698031032,3.40706652442291,2.95334155165917,1.7416975885413,2.0217820674694,1.26265113531884,2.73252930221678,5.74755261083682,5.40186389416048,2.26057226753573,1.7009124787832,1.2811372028485,2.06143794031403,0.776110112217047,4.74249584452253,3.40390944302075,3.51902248327898,3.94552318369635,1.39023624612799,3.48252166522167,0.823128545631774,2.7864797354589,2.80885274925294,2.83082697826187,4.26245249093389,3.31401236056803,1.17263029990548,2.52086886045421,2.84093682702252,2.36117078096885,3.08534225774756,2.55787339225449,1.3413670069981,2.45207218971056,2.13927804887525,1.47750717671186,0.891756905004413,1.31579988682799,1.53685080703735,0.939444931322602,4.20579897128254,2.98423375899925,1.98251269790279,2.90895623329899,1.91959425481711,3.25131340604614,2.70621668776396,3.83198696784351,3.11329261382818,4.37518940058886,0.474529061544512,5.10566759644434,1.25667604400135,1.79060824837036,0.779856348476481,1.79763881730844,1.51296634912286,1.39398891278057,7.58671603812327,3.08470984046268,1.1270773567308,1.4255592949172,2.32742984601151,2.03393877681924,2.02356918797623,1.91893192373483,2.35498091762062,1.35736880313981,1.1858105083486,2.66952169145751,2.55526693647164,1.34917267430912,3.44862206360455,1.92941727801933,2.03700681425136,1.43848068725405,0.972811360650212,1.64736847912849,0,2.60498663367952,0.624075346229121,2.27320990152401,1.61457672169721,0.964887042726734,4.61882975416512,5.11626811780309,4.07412441105065,2.37643120085263,3.75504397261603,2.01007508930179,4.04674189506223,2.53673742215138,2.04925687338048,2.21464689648775,3.18909537314974,1.96635977658886,2.59027472798843,1.88043776155965,6.03165135757089,3.80733978673097,2.95058563811422,2.20749397043786,3.05046120976805,4.92289083687253,3.27869890753351,0.504941854408746,6.62567260774139,8.19921363022941,3.23135096599198,4.54040716109849,4.67877215573028,3.39691836946599,3.23848561339915,5.26060544240361,3.95287777946523,3.85585579706168,1.84522110770749,2.49291845134157,2.93196526836437,4.61916344323099,3.98235415019888,3.64170954232472,3.93020624054176,1.69744571780308,2.65771703592696,5.22639751504677,2.06742634534577,1.81766864738753,1.42598951353889,0.316036757935816,0,2.06271086496374,2.38307724027652,3.6012218806262,2.97524972700335,3.64372959553707,4.43350584105684,2.49716344642899,1.81003922662333,5.78483403317739,5.86679270159276,4.02480934641258,1.7642271844397,1.15420377059036,0.968786560175433,2.23157822234177,1.19372344003136,0.984845398470368,2.33184669303881,4.45020724825223,2.9048049735635,2.06386867963222,1.85194527369712,2.0720530270516,0.956859594047176,0.915112692826091,1.69978429993855,1.81936888020755,1.93479963326193,1.90934123603023,4.9032079005076,4.26970880966382,2.26811215725783,2.50905955217362,1.52853794622324,2.29269388854195,2.0663363931334,1.57053565190418,1.16653475962614,0,0,1.19613236835183,2.81279433777066,2.52786544847262,1.93739735216597,0.675824501963113,1.87771581833206,2.8644964665669,2.09718688851422,0.241584120826006,0.576060012515731,1.26404448251271,4.66267995167378,3.18403967210964,1.16928740680016,3.40150721768215,2.78153896693771,1.44234539423963,1.47689527174577,1.51449674922221,0.990688486514998,1.10908803650525,1.07203668813728,1.05833025804362,1.16876902181569,2.0405734525369,5.32766288097755,2.24284641523689,3.69346156000973,2.51146472241848,2.81523713176773,3.47988086107804,1.71494703263253,3.00943262421218,3.95326289831947,1.84130094602871,5.72895513439397,1.3748254587495,3.42541259885321,1.5107877947794,6.75022500231806,2.2516060161211,4.98456649882625,2.5888015587591,3.32119512269365,5.98537310101547,3.07320490357441,1.94485373654635,4.40187641518763,2.75765262675021,2.66696073361938,2.88449080134452,1.92551525755089,1.76888048234658,2.02783439912192,2.45214243801899,1.77918864192777,1.85672941974121,2.64203157195821,2.38146845641537,3.82418275618023,3.27945674788299,4.94503080963968,4.85756436443511,2.40008476669791,1.59728225543404,1.90748951957857,2.32554266611726,2.07040636913727,1.94613598150856,2.74391959309159,4.20911538300549,2.8518863907631,3.92799590160417,3.91495559809775,2.06859412988683,6.54769669071503,0.929621047115796,2.12197272079256,5.49583271463481,4.44470056046276,2.57845264857958,3.06061331310149,3.30887128679273,1.62307484934295
|short_description=p3@Arhgdia
}}

Revision as of 15:12, 5 August 2015

Short description:p3@Arhgdia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgdia_5end
Coexpression cluster:NA
Association with transcript: 71bp_to_NM_133796, uc007mtk.2_5end
EntrezGene:192662
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arhgdia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D98.41
Mouse Schwann, donor2.CNhs12573.11746-123F98.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.09e-1575
central nervous system5.85e-1473
ectoderm-derived structure1.33e-0995
ectoderm1.33e-0995
presumptive ectoderm1.33e-0995
regional part of nervous system5.53e-0854
neural tube1.12e-0752
neural rod1.12e-0752
future spinal cord1.12e-0752
neural keel1.12e-0752
neurectoderm3.59e-0764
neural plate3.59e-0764
presumptive neural plate3.59e-0764
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