FFCP PHASE1:Hg19::chr2:64069042..64069056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7360 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12527 | |||
|TSSclassifier=strong | |||
|UniProt=C9JUW1 | |||
|association_with_transcript=6bp_to_ENST00000488245_5end | |||
|coexpression_cluster_id=C4241 | |||
|description=CAGE_peak_5_at_UGP2_5end | |||
|id=chr2:64069042..64069056,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-17!180;CL:0000057!1.36e-11!75;CL:0002620!1.95e-09!23;CL:0000393!1.79e-08!60;CL:0000211!1.79e-08!60;CL:0000034!1.97e-08!444;CL:0000680!2.89e-08!57;CL:0000056!2.89e-08!57;CL:0000355!2.89e-08!57;CL:0000048!1.78e-07!430;CL:0000144!1.97e-07!625;CL:0000723!2.09e-07!436;CL:0000187!2.31e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.44e-10;23!CL:0000134;1.54e-08;55!CL:0000723;2.35e-08;61!CL:0000048;1.16e-07;58!CL:0000034;2.13e-07;69!CL:0000136;4.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.93e-13,76;CL:0000034,1.90e-10,441;CL:0002620,6.59e-10,23;CL:0000680,1.92e-09,58;CL:0000056,1.92e-09,58;CL:0000355,1.92e-09,58;CL:0000393,2.05e-09,61;CL:0000211,2.05e-09,61;CL:0000723,4.36e-09,433;CL:0000048,5.02e-09,427;CL:0000187,2.10e-08,55;CL:0000136,7.08e-08,15;CL:0000359,8.91e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-15!83;UBERON:0002329!1.36e-15!83;UBERON:0003077!1.36e-15!83;UBERON:0003059!1.36e-15!83;UBERON:0007282!1.36e-15!83;UBERON:0009618!1.36e-15!83;UBERON:0007285!1.36e-15!83;UBERON:0004290!6.94e-12!70;UBERON:0000486!4.77e-11!82;UBERON:0001134!2.30e-09!61;UBERON:0002036!2.30e-09!61;UBERON:0003082!2.30e-09!61;UBERON:0003102!3.34e-09!95;UBERON:0002385!5.19e-09!63;UBERON:0001015!5.19e-09!63;UBERON:0000383!5.19e-09!63;UBERON:0005256!1.32e-08!143;UBERON:0002199!2.26e-08!45;UBERON:0002416!2.26e-08!45;UBERON:0002097!2.96e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.53e-07;31!UBERON:0001015;2.53e-07;31!UBERON:0000383;2.53e-07;31!UBERON:0000075;6.11e-07;16!UBERON:0002097;6.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.28e-13,71;UBERON:0003059,1.28e-13,71;UBERON:0007282,1.28e-13,71;UBERON:0004290,1.28e-13,71;UBERON:0009618,1.28e-13,71;UBERON:0007524,1.66e-13,73;UBERON:0003077,4.08e-13,72;UBERON:0007285,4.08e-13,72;UBERON:0000486,1.95e-12,83;UBERON:0003102,3.63e-11,99;UBERON:0007503,5.83e-11,78;UBERON:0001134,1.03e-10,62;UBERON:0002036,1.03e-10,62;UBERON:0003082,1.03e-10,62;UBERON:0002385,8.17e-10,64;UBERON:0001015,8.17e-10,64;UBERON:0000383,8.17e-10,64;UBERON:0002199,2.97e-09,46;UBERON:0002416,2.97e-09,46;UBERON:0005256,3.77e-09,122;UBERON:0003104,7.39e-09,160;UBERON:0009142,7.39e-09,160;UBERON:0002097,7.63e-09,41;UBERON:0000075,6.44e-07,16 | |||
|phase1_expression=19.0762298234084,8.56402095563933,9.16203626623813,11.0080628188443,7.59833860526389,6.97870819280295,0,3.79031924056099,1.04474251279935,0.737201809504527,2.09340350391728,0.873765488520689,0,18.3174202380869,10.6047160232933,7.39557661096953,1.80808358407193,3.65155045193687,2.92759679274304,0.492484232307152,0.612002073732759,0,1.43117993565528,1.23186982565596,1.12988375635323,0.840547463227464,0.328402357799783,0.393553906568396,0,0,0,0.919421224478927,0,1.47901604066715,0.46480320348181,0.568676929949686,0.880801318004542,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0.290796477559129,0.377875943688809,0,0.697287110717054,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0.545812300115692,0.449446968890169,0.918251677112708,0.320929027076094,0,0.329851300186716,0.598390972864896,0.426224750532694,2.03146467040009,0.56738522469114,3.11411124497787,0.502497330513487,0,0.217188844705117,4.23779651843358,4.78760926783834,4.74693581161327,0,0,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0.547992461293902,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.411202997999018,4.68122187093899,0.32592226663359,0.473447805734733,1.94826728407911,6.23898558556972,2.65145316727353,3.76607620792156,2.97884250141517,6.91693126518646,6.63302672555379,1.47994114143309,1.65810010671509,4.63684937176084,0.296573126324121,0.267540828089713,1.04535523804977,1.81294948316106,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,2.43806866313962,2.68280343881454,5.11450247374121,4.69870898099936,3.00802746381534,4.77993512570718,8.74814541756209,5.35298357332899,0.472674085820339,2.21729397462564,0.43917392846563,0.392937226493138,0,0.370784442784429,6.16640047943898,5.22389211897802,3.45690697349049,0,0,0,0.596287222100115,0,1.38856200643038,1.69592382577203,0,0,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0.24406205754817,2.57364156242108,1.62028389576352,0.803697554556718,0,0.337834441449967,0,0,0.732806975721629,0,0,0.436094052142534,6.46063537203914,3.16576279161449,6.48804985984772,2.86836620748814,1.77334191099179,1.12135520028461,3.20246987189115,1.97334038733728,5.91300967259556,1.61652806483626,2.12500474047496,2.72443369760877,5.18558332031999,0.70296429550139,3.74592092196385,3.4228309292667,5.52960118041664,5.04968344168189,3.88495066483516,7.58434356192142,5.30800845262722,2.33385202892359,3.82305390350332,1.18800285728205,1.97813543422845,0.910161361938026,0,4.88174730466792,3.62843707628696,6.09541054065202,3.07284334616587,2.14541457059314,2.85452311922534,2.7223723958405,6.99619579186562,8.5422955527427,8.26534414522291,6.60200411385685,6.08009922506789,18.034837803194,15.2615822191904,5.90717162844432,6.13853132515551,6.81571190459109,7.54809168866855,12.1234542614109,9.58525899794859,8.86618464403234,3.39121184620975,3.86521706326594,4.90943017063502,3.72845974005705,31.2252687691764,47.1805975224487,36.3687041181593,14.9271919222133,22.2042348770553,35.7677811894313,7.8224766164908,2.57296375277154,4.14404764057442,10.6804623447355,4.33127689001751,1.77460200059766,1.51726221070292,1.20505514941741,0.992645754591546,2.61455332910887,1.42362371466658,1.48314438976181,0.98110732562673,2.69323009862473,0.738155454624648,0,0,0,15.2106041786197,7.86261773342101,17.7236972004421,0.441463099414651,0.245976877086227,5.31860211925429,6.03626569747441,0,2.6137532827024,3.24059558054854,0,1.03993478527958,1.44331342025273,0.34779121492523,3.75707821554629,0.577465791044295,0.462985512576611,5.70762456703795,0,0,0.984868024349589,1.8720341211139,1.78357394746474,4.68669169933885,10.2469098201304,6.09632918142262,6.53777215730793,6.1033127087932,1.53353071666084,0.492663237895943,0.704387472105808,0.621984346622316,1.00883967391873,0.37872730027914,0.253991577168676,0,0,1.71072446022705,1.54241239054985,0.600686115687835,0.285826432630578,1.34557301214433,0.87192013766656,7.0404754388112,7.62703122970889,7.15312891703765,4.22651376278,3.45719551560332,4.16029747645464,1.54324424557285,0,1.8649552531127,3.28849385413739,10.3098105024374,3.29296134712308,7.16619605446217,1.06617584622764,9.50342247520115,3.91871190177462,2.61460037580088,4.59875759437462,1.2162378064119,0,2.10833939483032,8.38686994220539,2.29723871668228,4.27910715122155,7.96297186671686,3.49309748335652,6.08807275015645,4.37132061574756,0,0.215627574859517,0.128343036279748,1.77866236955724,2.60279707715243,0.773288812777695,1.00509759200609,1.27587750330633,0,0,0.414415513436035,23.9248408852323,5.50187573165645,7.86668568729233,20.3811444300191,13.5606031485843,16.0856463334613,9.37131319941706,4.51419149591578,0,2.0694614258501,5.31380478828349,2.39679919104214,4.86548241021264,0,0,0.413536052245775,0,0.213455115606889,0.909382714338778,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| |||
|short_description=p5@UGP2 | |||
}} |
Revision as of 03:28, 21 January 2014
Short description: | p5@UGP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UGP2_5end |
Coexpression cluster: | C4241_mature_Hepatocyte_iPS_H9_HES3GFP_Olfactory_liver |
Association with transcript: | 6bp_to_ENST00000488245_5end |
EntrezGene: | UGP2 |
HGNC: | 12527 |
UniProt: | C9JUW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.93e-13 | 76 |
stem cell | 1.90e-10 | 441 |
skin fibroblast | 6.59e-10 | 23 |
muscle precursor cell | 1.92e-09 | 58 |
myoblast | 1.92e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-09 | 58 |
electrically responsive cell | 2.05e-09 | 61 |
electrically active cell | 2.05e-09 | 61 |
somatic stem cell | 4.36e-09 | 433 |
multi fate stem cell | 5.02e-09 | 427 |
muscle cell | 2.10e-08 | 55 |
fat cell | 7.08e-08 | 15 |
vascular associated smooth muscle cell | 8.91e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
somite | 1.28e-13 | 71 |
presomitic mesoderm | 1.28e-13 | 71 |
presumptive segmental plate | 1.28e-13 | 71 |
dermomyotome | 1.28e-13 | 71 |
trunk paraxial mesoderm | 1.28e-13 | 71 |
dense mesenchyme tissue | 1.66e-13 | 73 |
paraxial mesoderm | 4.08e-13 | 72 |
presumptive paraxial mesoderm | 4.08e-13 | 72 |
multilaminar epithelium | 1.95e-12 | 83 |
surface structure | 3.63e-11 | 99 |
epithelial vesicle | 5.83e-11 | 78 |
skeletal muscle tissue | 1.03e-10 | 62 |
striated muscle tissue | 1.03e-10 | 62 |
myotome | 1.03e-10 | 62 |
muscle tissue | 8.17e-10 | 64 |
musculature | 8.17e-10 | 64 |
musculature of body | 8.17e-10 | 64 |
integument | 2.97e-09 | 46 |
integumental system | 2.97e-09 | 46 |
trunk mesenchyme | 3.77e-09 | 122 |
mesenchyme | 7.39e-09 | 160 |
entire embryonic mesenchyme | 7.39e-09 | 160 |
skin of body | 7.63e-09 | 41 |
subdivision of skeletal system | 6.44e-07 | 16 |