FFCP PHASE1:Mm9::chr11:69858821..69858825,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69858821..69858825,+|id=chr11:69858821..69858825,+|ontology_enrichment_celltype=CL:0000117!1.24e-11!23;CL:0000337!1.24e-11!23;CL:0000221!9.24e-10!44;CL:0000133!9.24e-10!44;CL:0002319!2.97e-09!43;CL:0000055!9.09e-09!50;CL:0000540!3.58e-08!33;CL:0000047!3.58e-08!33;CL:0000031!3.58e-08!33;CL:0000404!3.58e-08!33;CL:0000393!5.85e-08!39;CL:0000211!5.85e-08!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.44e-24!52;UBERON:0005068!1.44e-24!52;UBERON:0006241!1.44e-24!52;UBERON:0007135!1.44e-24!52;UBERON:0000073!3.47e-22!75;UBERON:0001016!3.47e-22!75;UBERON:0001017!1.61e-21!73;UBERON:0005743!1.61e-21!73;UBERON:0002346!3.03e-21!71;UBERON:0003075!3.03e-21!71;UBERON:0007284!3.03e-21!71;UBERON:0000033!1.41e-20!63;UBERON:0002616!2.21e-20!49;UBERON:0000955!1.06e-19!50;UBERON:0006238!1.06e-19!50;UBERON:0004121!1.60e-17!102;UBERON:0000924!1.60e-17!102;UBERON:0006601!1.60e-17!102;UBERON:0007811!1.08e-16!86;UBERON:0003056!2.26e-16!49;UBERON:0000153!2.29e-16!94;UBERON:0003080!7.93e-16!40;UBERON:0002020!3.08e-15!34;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0002791!3.64e-11!29;UBERON:0003528!3.64e-11!29;UBERON:0001893!3.64e-11!29;UBERON:0003076!9.77e-10!12;UBERON:0003057!9.77e-10!12;UBERON:0000025!2.12e-08!114;UBERON:0004111!4.48e-08!122;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8;UBERON:0002240!9.75e-07!6;UBERON:0005174!9.75e-07!6;UBERON:0001137!9.75e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002420,6.16e-13,8;UBERON:0007245,6.16e-13,8;UBERON:0010009,6.16e-13,8;UBERON:0010011,6.16e-13,8;UBERON:0000454,6.16e-13,8;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002020,1.20e-11,34;UBERON:0003528,1.16e-09,29;UBERON:0002791,1.16e-09,29;UBERON:0001893,1.16e-09,29;UBERON:0000369,1.33e-09,5;UBERON:0002435,1.33e-09,5;UBERON:0000204,1.33e-09,5;UBERON:0010082,1.33e-09,5;UBERON:0001049,1.26e-07,52;UBERON:0005068,1.26e-07,52;UBERON:0006241,1.26e-07,52;UBERON:0007135,1.26e-07,52;UBERON:0000073,2.43e-07,54;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,4.78e-07,40|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.809265843438391,0,0,0,0,1.3498495759221,0,0,0.599200221036809,0.384218305321555,0.622137673850866,0.135005938331691,0.210324961351382,0.571301968807607,1.32521124570968,0.734944795289724,0.287536413054709,0,0,0.638436690425939,0.768032666281217,0.527545150920775,0.640413505216868,1.04182674111352,1.3959149950069,0,0.763991238884051,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,1.38219787324151,1.21677024134594,1.53429274398198,0.62336413367868,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0,0.459804208866946,0.180062129805349,0,0.0680364991513279,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0.146199987425332,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,2.92150409984269,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0|short_description=p@chr11:69858821..69858825,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:69858821..69858825,+ | |||
|description=CAGE_peak_at_chr11:69858821..69858825,+ | |||
|id=chr11:69858821..69858825,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-11!23;CL:0000337!1.24e-11!23;CL:0000221!9.24e-10!44;CL:0000133!9.24e-10!44;CL:0002319!2.97e-09!43;CL:0000055!9.09e-09!50;CL:0000540!3.58e-08!33;CL:0000047!3.58e-08!33;CL:0000031!3.58e-08!33;CL:0000404!3.58e-08!33;CL:0000393!5.85e-08!39;CL:0000211!5.85e-08!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.44e-24!52;UBERON:0005068!1.44e-24!52;UBERON:0006241!1.44e-24!52;UBERON:0007135!1.44e-24!52;UBERON:0000073!3.47e-22!75;UBERON:0001016!3.47e-22!75;UBERON:0001017!1.61e-21!73;UBERON:0005743!1.61e-21!73;UBERON:0002346!3.03e-21!71;UBERON:0003075!3.03e-21!71;UBERON:0007284!3.03e-21!71;UBERON:0000033!1.41e-20!63;UBERON:0002616!2.21e-20!49;UBERON:0000955!1.06e-19!50;UBERON:0006238!1.06e-19!50;UBERON:0004121!1.60e-17!102;UBERON:0000924!1.60e-17!102;UBERON:0006601!1.60e-17!102;UBERON:0007811!1.08e-16!86;UBERON:0003056!2.26e-16!49;UBERON:0000153!2.29e-16!94;UBERON:0003080!7.93e-16!40;UBERON:0002020!3.08e-15!34;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0002791!3.64e-11!29;UBERON:0003528!3.64e-11!29;UBERON:0001893!3.64e-11!29;UBERON:0003076!9.77e-10!12;UBERON:0003057!9.77e-10!12;UBERON:0000025!2.12e-08!114;UBERON:0004111!4.48e-08!122;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8;UBERON:0002240!9.75e-07!6;UBERON:0005174!9.75e-07!6;UBERON:0001137!9.75e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,6.16e-13,8;UBERON:0007245,6.16e-13,8;UBERON:0010009,6.16e-13,8;UBERON:0010011,6.16e-13,8;UBERON:0000454,6.16e-13,8;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002020,1.20e-11,34;UBERON:0003528,1.16e-09,29;UBERON:0002791,1.16e-09,29;UBERON:0001893,1.16e-09,29;UBERON:0000369,1.33e-09,5;UBERON:0002435,1.33e-09,5;UBERON:0000204,1.33e-09,5;UBERON:0010082,1.33e-09,5;UBERON:0001049,1.26e-07,52;UBERON:0005068,1.26e-07,52;UBERON:0006241,1.26e-07,52;UBERON:0007135,1.26e-07,52;UBERON:0000073,2.43e-07,54;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,4.78e-07,40 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.809265843438391,0,0,0,0,1.3498495759221,0,0,0.599200221036809,0.384218305321555,0.622137673850866,0.135005938331691,0.210324961351382,0.571301968807607,1.32521124570968,0.734944795289724,0.287536413054709,0,0,0.638436690425939,0.768032666281217,0.527545150920775,0.640413505216868,1.04182674111352,1.3959149950069,0,0.763991238884051,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,1.38219787324151,1.21677024134594,1.53429274398198,0.62336413367868,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0,0.459804208866946,0.180062129805349,0,0.0680364991513279,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0.146199987425332,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,2.92150409984269,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr11:69858821..69858825,+ | |||
}} |
Latest revision as of 20:40, 3 August 2015
Short description: | p@chr11:69858821..69858825, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69858821..69858825, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basal ganglion | 6.16e-13 | 8 |
nuclear complex of neuraxis | 6.16e-13 | 8 |
aggregate regional part of brain | 6.16e-13 | 8 |
collection of basal ganglia | 6.16e-13 | 8 |
cerebral subcortex | 6.16e-13 | 8 |
cortex | 1.55e-12 | 1 |
zygote cortex | 1.55e-12 | 1 |
gray matter | 1.20e-11 | 34 |
brain grey matter | 1.16e-09 | 29 |
regional part of telencephalon | 1.16e-09 | 29 |
telencephalon | 1.16e-09 | 29 |
corpus striatum | 1.33e-09 | 5 |
striatum | 1.33e-09 | 5 |
ventral part of telencephalon | 1.33e-09 | 5 |
future corpus striatum | 1.33e-09 | 5 |
neural tube | 1.26e-07 | 52 |
neural rod | 1.26e-07 | 52 |
future spinal cord | 1.26e-07 | 52 |
neural keel | 1.26e-07 | 52 |
regional part of nervous system | 2.43e-07 | 54 |
regional part of forebrain | 3.17e-07 | 39 |
forebrain | 3.17e-07 | 39 |
future forebrain | 3.17e-07 | 39 |
anterior neural tube | 4.78e-07 | 40 |