FFCP PHASE1:Mm9::chr11:88828250..88828258,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|UniProt=A6PWE0|association_with_transcript=-5bp_to_ENSMUST00000121228_5end|description=CAGE_peak_1_at_ENSMUST00000121228_5end|id=chr11:88828250..88828258,-|ontology_enrichment_celltype=CL:0002453!1.50e-25!8;CL:0000333!5.76e-25!10;CL:0000095!5.76e-25!10;CL:0000243!5.76e-25!10;CL:0000123!5.76e-25!10;CL:0000125!5.76e-25!10;CL:0000030!5.76e-25!10;CL:0000339!5.76e-25!10;CL:0000128!1.15e-19!6;CL:0000126!1.15e-19!6;CL:0000127!1.15e-19!6;CL:0002604!9.97e-08!2;CL:0002605!9.97e-08!2;CL:0000708!1.24e-07!2;CL:0000864!1.78e-07!2;CL:0000878!1.78e-07!2;CL:0000129!1.78e-07!2;CL:0002603!2.06e-07!2|ontology_enrichment_celltype_v019_2=CL:0002453,2.73e-47,8;CL:0000333,1.03e-37,10;CL:0000095,1.03e-37,10;CL:0000243,1.03e-37,10;CL:0000123,1.03e-37,10;CL:0000125,1.03e-37,10;CL:0000030,1.03e-37,10;CL:0000339,1.03e-37,10;CL:0000128,4.95e-36,6;CL:0000126,4.95e-36,6;CL:0000127,4.95e-36,6;CL:0002605,2.78e-13,2;CL:0002604,2.78e-13,2;CL:0000708,4.21e-13,2;CL:0000878,8.36e-13,2;CL:0000129,8.36e-13,2;CL:0002603,1.10e-12,2;CL:0000219,5.27e-10,54;CL:0000151,4.94e-09,3;CL:0000499,4.94e-09,3;CL:0000327,4.94e-09,3;CL:0002319,3.63e-08,43;CL:0000221,5.83e-08,44;CL:0000133,5.83e-08,44;CL:0002194,7.79e-07,4;CL:0000766,7.79e-07,4;CL:0000234,7.79e-07,4;CL:0000576,7.79e-07,4;CL:0000235,7.79e-07,4;CL:0000864,7.79e-07,4;CL:0002009,7.79e-07,4;CL:0000040,7.79e-07,4;CL:0000559,7.79e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!6.64e-08!9;UBERON:0000019!6.64e-08!9;UBERON:0000047!6.64e-08!9;UBERON:0004088!6.64e-08!9;UBERON:0002104!6.64e-08!9;UBERON:0001456!6.64e-08!9;UBERON:0003072!6.64e-08!9;UBERON:0003071!6.64e-08!9;UBERON:0004128!6.64e-08!9;UBERON:0003210!1.24e-07!2;UBERON:0010147!7.24e-07!2;UBERON:0003937!7.24e-07!2;UBERON:0005399!7.24e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.21e-13,2;UBERON:0000998,6.32e-07,1;UBERON:0007194,6.32e-07,1;UBERON:0006868,6.32e-07,1;UBERON:0002037,8.90e-07,4;UBERON:0002680,8.90e-07,4;UBERON:0001895,8.90e-07,4;UBERON:0010092,8.90e-07,4;UBERON:0006215,8.90e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1245662973971,5.23260375313072,27.2410866590745,38.3026901176338,47.875356195874,27.3129872293446,0,0,0,0,0,0,0,0,0,14.9091594110418,162.740947688339,0,0,0,18.5752068521411,20.3635701820424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0.229902104433473,0,0,0.340182495756639,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5877317587411,0,0,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,14.6389030474129,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000121228}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A6PWE0 | |||
|association_with_transcript=-5bp_to_ENSMUST00000121228_5end | |||
|cluster_id=chr11:88828250..88828258,- | |||
|description=CAGE_peak_1_at_ENSMUST00000121228_5end | |||
|id=chr11:88828250..88828258,- | |||
|ontology_enrichment_celltype=CL:0002453!1.50e-25!8;CL:0000333!5.76e-25!10;CL:0000095!5.76e-25!10;CL:0000243!5.76e-25!10;CL:0000123!5.76e-25!10;CL:0000125!5.76e-25!10;CL:0000030!5.76e-25!10;CL:0000339!5.76e-25!10;CL:0000128!1.15e-19!6;CL:0000126!1.15e-19!6;CL:0000127!1.15e-19!6;CL:0002604!9.97e-08!2;CL:0002605!9.97e-08!2;CL:0000708!1.24e-07!2;CL:0000864!1.78e-07!2;CL:0000878!1.78e-07!2;CL:0000129!1.78e-07!2;CL:0002603!2.06e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.73e-47,8;CL:0000333,1.03e-37,10;CL:0000095,1.03e-37,10;CL:0000243,1.03e-37,10;CL:0000123,1.03e-37,10;CL:0000125,1.03e-37,10;CL:0000030,1.03e-37,10;CL:0000339,1.03e-37,10;CL:0000128,4.95e-36,6;CL:0000126,4.95e-36,6;CL:0000127,4.95e-36,6;CL:0002605,2.78e-13,2;CL:0002604,2.78e-13,2;CL:0000708,4.21e-13,2;CL:0000878,8.36e-13,2;CL:0000129,8.36e-13,2;CL:0002603,1.10e-12,2;CL:0000219,5.27e-10,54;CL:0000151,4.94e-09,3;CL:0000499,4.94e-09,3;CL:0000327,4.94e-09,3;CL:0002319,3.63e-08,43;CL:0000221,5.83e-08,44;CL:0000133,5.83e-08,44;CL:0002194,7.79e-07,4;CL:0000766,7.79e-07,4;CL:0000234,7.79e-07,4;CL:0000576,7.79e-07,4;CL:0000235,7.79e-07,4;CL:0000864,7.79e-07,4;CL:0002009,7.79e-07,4;CL:0000040,7.79e-07,4;CL:0000559,7.79e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.64e-08!9;UBERON:0000019!6.64e-08!9;UBERON:0000047!6.64e-08!9;UBERON:0004088!6.64e-08!9;UBERON:0002104!6.64e-08!9;UBERON:0001456!6.64e-08!9;UBERON:0003072!6.64e-08!9;UBERON:0003071!6.64e-08!9;UBERON:0004128!6.64e-08!9;UBERON:0003210!1.24e-07!2;UBERON:0010147!7.24e-07!2;UBERON:0003937!7.24e-07!2;UBERON:0005399!7.24e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.21e-13,2;UBERON:0000998,6.32e-07,1;UBERON:0007194,6.32e-07,1;UBERON:0006868,6.32e-07,1;UBERON:0002037,8.90e-07,4;UBERON:0002680,8.90e-07,4;UBERON:0001895,8.90e-07,4;UBERON:0010092,8.90e-07,4;UBERON:0006215,8.90e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1245662973971,5.23260375313072,27.2410866590745,38.3026901176338,47.875356195874,27.3129872293446,0,0,0,0,0,0,0,0,0,14.9091594110418,162.740947688339,0,0,0,18.5752068521411,20.3635701820424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0.229902104433473,0,0,0.340182495756639,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5877317587411,0,0,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,14.6389030474129,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000121228 | |||
}} |
Revision as of 07:36, 4 August 2015
Short description: | p1@ENSMUST00000121228 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000121228_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENSMUST00000121228_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.73e-47 | 8 |
migratory neural crest cell | 1.03e-37 | 10 |
neuron associated cell | 1.03e-37 | 10 |
glial cell (sensu Vertebrata) | 1.03e-37 | 10 |
neuron associated cell (sensu Vertebrata) | 1.03e-37 | 10 |
glial cell | 1.03e-37 | 10 |
glioblast | 1.03e-37 | 10 |
glioblast (sensu Vertebrata) | 1.03e-37 | 10 |
oligodendrocyte | 4.95e-36 | 6 |
macroglial cell | 4.95e-36 | 6 |
astrocyte | 4.95e-36 | 6 |
astrocyte of the cerebral cortex | 2.78e-13 | 2 |
astrocyte of the hippocampus | 2.78e-13 | 2 |
leptomeningeal cell | 4.21e-13 | 2 |
central nervous system macrophage | 8.36e-13 | 2 |
microglial cell | 8.36e-13 | 2 |
astrocyte of the cerebellum | 1.10e-12 | 2 |
motile cell | 5.27e-10 | 54 |
secretory cell | 4.94e-09 | 3 |
stromal cell | 4.94e-09 | 3 |
extracellular matrix secreting cell | 4.94e-09 | 3 |
neural cell | 3.63e-08 | 43 |
ectodermal cell | 5.83e-08 | 44 |
neurectodermal cell | 5.83e-08 | 44 |
monopoietic cell | 7.79e-07 | 4 |
myeloid leukocyte | 7.79e-07 | 4 |
phagocyte | 7.79e-07 | 4 |
monocyte | 7.79e-07 | 4 |
macrophage | 7.79e-07 | 4 |
tissue-resident macrophage | 7.79e-07 | 4 |
macrophage dendritic cell progenitor | 7.79e-07 | 4 |
monoblast | 7.79e-07 | 4 |
promonocyte | 7.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 4.21e-13 | 2 |
seminal vesicle | 6.32e-07 | 1 |
vesicular gland | 6.32e-07 | 1 |
seminal fluid secreting gland | 6.32e-07 | 1 |
cerebellum | 8.90e-07 | 4 |
regional part of metencephalon | 8.90e-07 | 4 |
metencephalon | 8.90e-07 | 4 |
future metencephalon | 8.90e-07 | 4 |
rhombic lip | 8.90e-07 | 4 |