FFCP PHASE1:Mm9::chr12:73475311..73475335,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73475311..73475335,-|id=chr12:73475311..73475335,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,3.57e-10,6;CL:0000556,3.57e-10,6;CL:0000050,5.97e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!9.19e-15!10;UBERON:0000411!9.19e-15!10;UBERON:0001950!9.19e-15!10;UBERON:0002020!2.19e-14!34;UBERON:0001049!3.91e-12!52;UBERON:0005068!3.91e-12!52;UBERON:0006241!3.91e-12!52;UBERON:0007135!3.91e-12!52;UBERON:0000955!6.99e-12!50;UBERON:0006238!6.99e-12!50;UBERON:0002791!8.96e-12!29;UBERON:0003528!8.96e-12!29;UBERON:0001893!8.96e-12!29;UBERON:0001017!1.54e-11!73;UBERON:0005743!1.54e-11!73;UBERON:0003080!2.51e-11!40;UBERON:0002616!4.31e-11!49;UBERON:0000073!5.53e-11!75;UBERON:0001016!5.53e-11!75;UBERON:0000956!7.15e-11!21;UBERON:0001869!7.15e-11!21;UBERON:0000203!7.15e-11!21;UBERON:0002780!1.07e-10!39;UBERON:0001890!1.07e-10!39;UBERON:0006240!1.07e-10!39;UBERON:0002619!1.56e-10!17;UBERON:0000033!1.15e-09!63;UBERON:0002346!3.28e-08!71;UBERON:0003075!3.28e-08!71;UBERON:0007284!3.28e-08!71;UBERON:0003056!4.18e-08!49;UBERON:0004121!1.55e-07!102;UBERON:0000924!1.55e-07!102;UBERON:0006601!1.55e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.50e-30,10;UBERON:0000411,4.50e-30,10;UBERON:0001950,4.50e-30,10;UBERON:0000956,1.90e-18,21;UBERON:0001869,1.90e-18,21;UBERON:0000203,1.90e-18,21;UBERON:0002619,1.61e-17,17;UBERON:0003528,3.64e-13,29;UBERON:0002791,3.64e-13,29;UBERON:0001893,3.64e-13,29;UBERON:0002020,4.04e-11,34;UBERON:0002780,1.35e-09,39;UBERON:0001890,1.35e-09,39;UBERON:0006240,1.35e-09,39;UBERON:0003080,2.46e-09,40;UBERON:0002616,5.17e-08,46;UBERON:0001851,6.29e-08,1;UBERON:0005889,6.29e-08,1;UBERON:0000955,7.96e-08,47;UBERON:0006238,7.96e-08,47;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0003056,1.79e-07,49;UBERON:0001049,5.41e-07,52;UBERON:0005068,5.41e-07,52;UBERON:0006241,5.41e-07,52;UBERON:0007135,5.41e-07,52|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.57731082679119,3.01651753932625,1.27316895539409,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.923204014111357,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.33044095282455,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0.125654352112864,2.78118912307642,2.81287003063364,0.20778804455956,0.811206315338788,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.402048282689293,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr12:73475311..73475335,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:73475311..73475335,- | |||
|description=CAGE_peak_at_chr12:73475311..73475335,- | |||
|id=chr12:73475311..73475335,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.57e-10,6;CL:0000556,3.57e-10,6;CL:0000050,5.97e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.19e-15!10;UBERON:0000411!9.19e-15!10;UBERON:0001950!9.19e-15!10;UBERON:0002020!2.19e-14!34;UBERON:0001049!3.91e-12!52;UBERON:0005068!3.91e-12!52;UBERON:0006241!3.91e-12!52;UBERON:0007135!3.91e-12!52;UBERON:0000955!6.99e-12!50;UBERON:0006238!6.99e-12!50;UBERON:0002791!8.96e-12!29;UBERON:0003528!8.96e-12!29;UBERON:0001893!8.96e-12!29;UBERON:0001017!1.54e-11!73;UBERON:0005743!1.54e-11!73;UBERON:0003080!2.51e-11!40;UBERON:0002616!4.31e-11!49;UBERON:0000073!5.53e-11!75;UBERON:0001016!5.53e-11!75;UBERON:0000956!7.15e-11!21;UBERON:0001869!7.15e-11!21;UBERON:0000203!7.15e-11!21;UBERON:0002780!1.07e-10!39;UBERON:0001890!1.07e-10!39;UBERON:0006240!1.07e-10!39;UBERON:0002619!1.56e-10!17;UBERON:0000033!1.15e-09!63;UBERON:0002346!3.28e-08!71;UBERON:0003075!3.28e-08!71;UBERON:0007284!3.28e-08!71;UBERON:0003056!4.18e-08!49;UBERON:0004121!1.55e-07!102;UBERON:0000924!1.55e-07!102;UBERON:0006601!1.55e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.50e-30,10;UBERON:0000411,4.50e-30,10;UBERON:0001950,4.50e-30,10;UBERON:0000956,1.90e-18,21;UBERON:0001869,1.90e-18,21;UBERON:0000203,1.90e-18,21;UBERON:0002619,1.61e-17,17;UBERON:0003528,3.64e-13,29;UBERON:0002791,3.64e-13,29;UBERON:0001893,3.64e-13,29;UBERON:0002020,4.04e-11,34;UBERON:0002780,1.35e-09,39;UBERON:0001890,1.35e-09,39;UBERON:0006240,1.35e-09,39;UBERON:0003080,2.46e-09,40;UBERON:0002616,5.17e-08,46;UBERON:0001851,6.29e-08,1;UBERON:0005889,6.29e-08,1;UBERON:0000955,7.96e-08,47;UBERON:0006238,7.96e-08,47;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0003056,1.79e-07,49;UBERON:0001049,5.41e-07,52;UBERON:0005068,5.41e-07,52;UBERON:0006241,5.41e-07,52;UBERON:0007135,5.41e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.57731082679119,3.01651753932625,1.27316895539409,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.923204014111357,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.33044095282455,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0.125654352112864,2.78118912307642,2.81287003063364,0.20778804455956,0.811206315338788,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.402048282689293,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:73475311..73475335,- | |||
}} |
Latest revision as of 05:02, 5 August 2015
Short description: | p@chr12:73475311..73475335, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73475311..73475335, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.57e-10 | 6 |
megakaryocyte | 3.57e-10 | 6 |
megakaryocyte-erythroid progenitor cell | 5.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.50e-30 | 10 |
visual cortex | 4.50e-30 | 10 |
neocortex | 4.50e-30 | 10 |
cerebral cortex | 1.90e-18 | 21 |
cerebral hemisphere | 1.90e-18 | 21 |
pallium | 1.90e-18 | 21 |
regional part of cerebral cortex | 1.61e-17 | 17 |
brain grey matter | 3.64e-13 | 29 |
regional part of telencephalon | 3.64e-13 | 29 |
telencephalon | 3.64e-13 | 29 |
gray matter | 4.04e-11 | 34 |
regional part of forebrain | 1.35e-09 | 39 |
forebrain | 1.35e-09 | 39 |
future forebrain | 1.35e-09 | 39 |
anterior neural tube | 2.46e-09 | 40 |
regional part of brain | 5.17e-08 | 46 |
cortex | 6.29e-08 | 1 |
zygote cortex | 6.29e-08 | 1 |
brain | 7.96e-08 | 47 |
future brain | 7.96e-08 | 47 |
lymph node | 8.50e-08 | 1 |
axillary lymph node | 8.50e-08 | 1 |
peripheral lymph node | 8.50e-08 | 1 |
shoulder | 8.50e-08 | 1 |
pre-chordal neural plate | 1.79e-07 | 49 |
neural tube | 5.41e-07 | 52 |
neural rod | 5.41e-07 | 52 |
future spinal cord | 5.41e-07 | 52 |
neural keel | 5.41e-07 | 52 |