FFCP PHASE1:Hg19::chr4:74902919..74902931,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr4:74902919..74902931,- | |||
|id=chr4:74902919..74902931,- | |||
|ontology_enrichment_celltype=CL:0002057!1.90e-26!42;CL:0000860!3.67e-24!45;CL:0002194!4.87e-16!63;CL:0000576!4.87e-16!63;CL:0000040!4.87e-16!63;CL:0000559!4.87e-16!63;CL:0000359!1.47e-15!32;CL:0002009!2.53e-15!65;CL:0000839!1.02e-13!70;CL:0000557!2.01e-13!71;CL:0000723!7.70e-13!436;CL:0000034!7.91e-13!444;CL:0000048!1.05e-12!430;CL:0000680!3.71e-12!57;CL:0000056!3.71e-12!57;CL:0000355!3.71e-12!57;CL:0000766!4.46e-12!76;CL:0000192!9.89e-11!42;CL:0000514!9.89e-11!42;CL:0000187!2.00e-09!54;CL:0000569!1.08e-08!4;CL:0000011!1.08e-08!4;CL:0000183!3.25e-08!59;CL:0000763!4.51e-08!112;CL:0000049!4.51e-08!112;CL:0000393!5.35e-08!60;CL:0000211!5.35e-08!60;CL:0002595!6.28e-08!5;CL:0002371!9.55e-08!591;CL:0002592!4.09e-07!3;CL:0002494!4.24e-07!16;CL:0002582!5.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.66e-38;33!CL:0002057;3.66e-38;33!CL:0000473;2.34e-27;39!CL:0000234;2.34e-27;39!CL:0002595;8.12e-27;5!CL:0002593;8.43e-18;2!CL:0000576;3.11e-15;48!CL:0000359;9.12e-12;32!CL:0000766;1.97e-10;69!CL:0002087;1.71e-07;104!CL:0000192;1.76e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.06e-32,42;CL:0002057,8.06e-32,42;CL:0000473,1.44e-27,48;CL:0000234,1.44e-27,48;CL:0002595,7.86e-27,5;CL:0002194,1.31e-21,59;CL:0000576,1.31e-21,59;CL:0000040,1.31e-21,59;CL:0000559,1.31e-21,59;CL:0002009,7.68e-21,61;CL:0000839,4.05e-19,66;CL:0000557,8.36e-19,67;CL:0002593,7.43e-18,2;CL:0000766,2.31e-17,72;CL:0000359,7.95e-12,32;CL:0000763,7.05e-11,108;CL:0000049,7.05e-11,108;CL:0002087,4.38e-10,115;CL:0002031,1.42e-09,120;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000738,3.44e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.33e-22;42!CL:0000514;1.76e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.39e-19!167;UBERON:0002371!3.55e-12!80;UBERON:0004573!2.35e-11!33;UBERON:0004571!2.35e-11!33;UBERON:0003081!2.75e-11!216;UBERON:0001134!5.72e-11!61;UBERON:0002036!5.72e-11!61;UBERON:0003082!5.72e-11!61;UBERON:0001474!7.94e-11!86;UBERON:0001637!9.89e-11!42;UBERON:0003509!9.89e-11!42;UBERON:0004572!9.89e-11!42;UBERON:0002385!1.96e-10!63;UBERON:0001015!1.96e-10!63;UBERON:0000383!1.96e-10!63;UBERON:0004290!6.50e-10!70;UBERON:0000486!2.06e-09!82;UBERON:0004765!6.09e-09!101;UBERON:0001434!6.09e-09!101;UBERON:0002193!6.55e-09!112;UBERON:0002390!8.08e-09!102;UBERON:0003061!8.08e-09!102;UBERON:0002119!1.10e-08!4;UBERON:0004531!1.10e-08!4;UBERON:0000926!1.58e-08!448;UBERON:0004120!1.58e-08!448;UBERON:0006603!1.58e-08!448;UBERON:0002405!1.92e-08!115;UBERON:0000914!3.19e-08!83;UBERON:0002329!3.19e-08!83;UBERON:0003077!3.19e-08!83;UBERON:0003059!3.19e-08!83;UBERON:0007282!3.19e-08!83;UBERON:0009618!3.19e-08!83;UBERON:0007285!3.19e-08!83;UBERON:0003834!6.28e-08!5;UBERON:0001533!6.28e-08!5;UBERON:0001621!4.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;8.12e-27;5!UBERON:0001533;8.12e-27;5!UBERON:0003513;3.05e-19;7!UBERON:0002456;8.43e-18;2!UBERON:0004573;1.54e-09;33!UBERON:0004571;1.54e-09;33!UBERON:0001637;8.49e-08;42!UBERON:0003509;8.49e-08;42!UBERON:0004572;8.49e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,7.86e-27,5;UBERON:0001533,7.86e-27,5;UBERON:0003513,2.98e-19,7;UBERON:0002456,7.43e-18,2;UBERON:0002204,1.24e-16,167;UBERON:0002371,2.42e-16,76;UBERON:0001474,5.35e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0003081,4.23e-13,203;UBERON:0002405,5.61e-13,93;UBERON:0002390,3.31e-12,98;UBERON:0003061,3.31e-12,98;UBERON:0001434,6.40e-12,100;UBERON:0004573,1.91e-11,33;UBERON:0004571,1.91e-11,33;UBERON:0002193,7.05e-11,108;UBERON:0000926,2.69e-09,315;UBERON:0004120,2.69e-09,315;UBERON:0006603,2.69e-09,315;UBERON:0001637,7.83e-09,42;UBERON:0003509,7.83e-09,42;UBERON:0004572,7.83e-09,42 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0.411167888021826,1.85823822537062,0.28769239232215,0,1.18241114944293,6.20542225325913,1.93645405075148,4.06279459783025,0.188242339542605,0,0.449446968890169,7.95818120164347,0.641858054152187,7.67204550958849,0,0,0,7.54544020434318,5.10646702222026,11.2108004819203,0.502497330513487,0.521482918420201,0.217188844705117,5.44859552370032,4.05105399586321,12.9749578850763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,1.55776328755086,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,1.06461206063404,0.869932992075073,0.18532421910392,0.715624433709956,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0,3.89941583410055,4.22600587027022,0,0,0,0,1.32687795048244,3.5076070820301,0,0,0,0.92947049429925,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.915360273587694,0.151230923763239,0.310874401165561,0.887130899937803,0.318593534327405,2.24901556081802,0.155262956876259,0.414706207840855,0,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:74902919..74902931,- | |||
}} |
Revision as of 01:37, 22 January 2014
Short description: | p@chr4:74902919..74902931, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74902919..74902931, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.06e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.06e-32 | 42 |
defensive cell | 1.44e-27 | 48 |
phagocyte | 1.44e-27 | 48 |
smooth muscle cell of the subclavian artery | 7.86e-27 | 5 |
monopoietic cell | 1.31e-21 | 59 |
monocyte | 1.31e-21 | 59 |
monoblast | 1.31e-21 | 59 |
promonocyte | 1.31e-21 | 59 |
macrophage dendritic cell progenitor | 7.68e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.05e-19 | 66 |
granulocyte monocyte progenitor cell | 8.36e-19 | 67 |
smooth muscle cell of the internal thoracic artery | 7.43e-18 | 2 |
myeloid leukocyte | 2.31e-17 | 72 |
vascular associated smooth muscle cell | 7.95e-12 | 32 |
myeloid cell | 7.05e-11 | 108 |
common myeloid progenitor | 7.05e-11 | 108 |
nongranular leukocyte | 4.38e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.42e-09 | 120 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
leukocyte | 3.44e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 7.86e-27 | 5 |
subclavian artery | 7.86e-27 | 5 |
trunk blood vessel | 2.98e-19 | 7 |
internal thoracic artery | 7.43e-18 | 2 |
musculoskeletal system | 1.24e-16 | 167 |
bone marrow | 2.42e-16 | 76 |
bone element | 5.35e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
lateral plate mesoderm | 4.23e-13 | 203 |
immune system | 5.61e-13 | 93 |
hematopoietic system | 3.31e-12 | 98 |
blood island | 3.31e-12 | 98 |
skeletal system | 6.40e-12 | 100 |
systemic artery | 1.91e-11 | 33 |
systemic arterial system | 1.91e-11 | 33 |
hemolymphoid system | 7.05e-11 | 108 |
mesoderm | 2.69e-09 | 315 |
mesoderm-derived structure | 2.69e-09 | 315 |
presumptive mesoderm | 2.69e-09 | 315 |
artery | 7.83e-09 | 42 |
arterial blood vessel | 7.83e-09 | 42 |
arterial system | 7.83e-09 | 42 |