FFCP PHASE1:Hg19::chr5:55382590..55382597,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr5:55382590..55382597,+ | |||
|id=chr5:55382590..55382597,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.12e-60!42;CL:0000860!1.16e-55!45;CL:0002009!3.30e-42!65;CL:0000557!4.20e-38!71;CL:0002194!3.58e-37!63;CL:0000576!3.58e-37!63;CL:0000040!3.58e-37!63;CL:0000559!3.58e-37!63;CL:0000766!6.25e-35!76;CL:0000839!7.39e-33!70;CL:0000763!2.53e-27!112;CL:0000049!2.53e-27!112;CL:0000738!2.12e-20!140;CL:0002031!5.40e-19!124;CL:0002087!8.56e-17!119;CL:0002032!3.31e-16!165;CL:0000837!3.31e-16!165;CL:0000037!2.98e-15!172;CL:0000566!2.98e-15!172;CL:0000988!5.13e-14!182;CL:0002166!4.50e-13!3;CL:0001014!2.53e-09!2;CL:0001016!2.53e-09!2;CL:0000453!9.59e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-70;33!CL:0002057;5.96e-70;33!CL:0000473;3.73e-48;39!CL:0000234;3.73e-48;39!CL:0000576;9.25e-30;48!CL:0002166;2.23e-18;3!CL:0000766;1.20e-17;69!CL:0001014;6.71e-13;2!CL:0001016;6.71e-13;2!CL:0002087;8.28e-10;104!CL:0000763;1.59e-09;100!CL:0002539;2.48e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.14e-59,42;CL:0002057,9.14e-59,42;CL:0000473,7.14e-51,48;CL:0000234,7.14e-51,48;CL:0002009,1.57e-46,61;CL:0000557,5.24e-42,67;CL:0002194,8.11e-40,59;CL:0000576,8.11e-40,59;CL:0000040,8.11e-40,59;CL:0000559,8.11e-40,59;CL:0000839,3.40e-35,66;CL:0000766,3.65e-35,72;CL:0000763,9.48e-27,108;CL:0000049,9.48e-27,108;CL:0002031,1.64e-21,120;CL:0000738,2.86e-20,136;CL:0002087,1.88e-18,115;CL:0002166,2.23e-18,3;CL:0002032,2.24e-16,161;CL:0000837,2.24e-16,161;CL:0000037,1.72e-15,168;CL:0000988,1.86e-14,177;CL:0001014,6.71e-13,2;CL:0001016,6.71e-13,2;CL:0002539,2.40e-09,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-43;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.35e-33!80;UBERON:0004765!2.01e-31!101;UBERON:0001434!2.01e-31!101;UBERON:0001474!2.54e-30!86;UBERON:0002390!1.58e-24!102;UBERON:0003061!1.58e-24!102;UBERON:0002204!8.56e-22!167;UBERON:0002193!9.63e-22!112;UBERON:0002405!5.30e-21!115;UBERON:0003081!1.03e-12!216;UBERON:0001708!6.49e-10!4;UBERON:0001704!6.49e-10!4;UBERON:0002090!9.78e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;6.34e-14;4!UBERON:0008895;6.34e-14;4!UBERON:0011159;3.04e-11;5!UBERON:0004237;2.48e-09;10!UBERON:0004695;2.48e-09;10!UBERON:0002111;2.48e-09;10!UBERON:0004178;2.48e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.13e-39,90;UBERON:0002371,1.53e-36,76;UBERON:0001434,5.52e-35,100;UBERON:0001474,1.48e-33,82;UBERON:0002405,4.54e-29,93;UBERON:0002390,2.33e-27,98;UBERON:0003061,2.33e-27,98;UBERON:0002204,2.24e-26,167;UBERON:0002193,2.07e-24,108;UBERON:0003081,5.38e-16,203;UBERON:0001708,6.34e-14,4;UBERON:0008895,6.34e-14,4;UBERON:0011159,3.04e-11,5;UBERON:0010188,1.89e-09,6;UBERON:0002539,1.89e-09,6;UBERON:0008816,1.89e-09,6;UBERON:0004237,2.40e-09,10;UBERON:0004695,2.40e-09,10;UBERON:0002111,2.40e-09,10;UBERON:0004178,2.40e-09,10;UBERON:0000926,2.64e-09,315;UBERON:0004120,2.64e-09,315;UBERON:0006603,2.64e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,1.80808358407193,2.19093027116212,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85943229524548,2.46700732813095,5.26500830521676,6.04154023876516,2.30544635876191,12.2970759542064,6.20542225325913,13.5551783552603,27.0852973188684,0.376484679085209,0.272906150057846,4.94391665779186,22.3441241430759,10.9115869205872,44.7535988059329,0,0.598390972864896,0.852449501065388,26.9894591924583,43.1212770765266,149.477339758938,0.75374599577023,1.5644487552606,1.73751075764093,6.65939452896706,27.6208226990674,68.9888004621128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,5.03946384596579,5.52922879245307,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48734663726712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,9.2856234546954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24901556081802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:55382590..55382597,+ | |||
}} |
Revision as of 05:27, 22 January 2014
Short description: | p@chr5:55382590..55382597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:55382590..55382597, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.14e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.14e-59 | 42 |
defensive cell | 7.14e-51 | 48 |
phagocyte | 7.14e-51 | 48 |
macrophage dendritic cell progenitor | 1.57e-46 | 61 |
granulocyte monocyte progenitor cell | 5.24e-42 | 67 |
monopoietic cell | 8.11e-40 | 59 |
monocyte | 8.11e-40 | 59 |
monoblast | 8.11e-40 | 59 |
promonocyte | 8.11e-40 | 59 |
myeloid lineage restricted progenitor cell | 3.40e-35 | 66 |
myeloid leukocyte | 3.65e-35 | 72 |
myeloid cell | 9.48e-27 | 108 |
common myeloid progenitor | 9.48e-27 | 108 |
hematopoietic lineage restricted progenitor cell | 1.64e-21 | 120 |
leukocyte | 2.86e-20 | 136 |
nongranular leukocyte | 1.88e-18 | 115 |
epithelial cell of Malassez | 2.23e-18 | 3 |
hematopoietic oligopotent progenitor cell | 2.24e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-16 | 161 |
hematopoietic stem cell | 1.72e-15 | 168 |
hematopoietic cell | 1.86e-14 | 177 |
CD1a-positive Langerhans cell | 6.71e-13 | 2 |
immature CD1a-positive Langerhans cell | 6.71e-13 | 2 |
aortic smooth muscle cell | 2.40e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.13e-39 | 90 |
bone marrow | 1.53e-36 | 76 |
skeletal system | 5.52e-35 | 100 |
bone element | 1.48e-33 | 82 |
immune system | 4.54e-29 | 93 |
hematopoietic system | 2.33e-27 | 98 |
blood island | 2.33e-27 | 98 |
musculoskeletal system | 2.24e-26 | 167 |
hemolymphoid system | 2.07e-24 | 108 |
lateral plate mesoderm | 5.38e-16 | 203 |
jaw skeleton | 6.34e-14 | 4 |
splanchnocranium | 6.34e-14 | 4 |
primary subdivision of cranial skeletal system | 3.04e-11 | 5 |
protuberance | 1.89e-09 | 6 |
pharyngeal arch | 1.89e-09 | 6 |
embryonic head | 1.89e-09 | 6 |
blood vessel smooth muscle | 2.40e-09 | 10 |
arterial system smooth muscle | 2.40e-09 | 10 |
artery smooth muscle tissue | 2.40e-09 | 10 |
aorta smooth muscle tissue | 2.40e-09 | 10 |
mesoderm | 2.64e-09 | 315 |
mesoderm-derived structure | 2.64e-09 | 315 |
presumptive mesoderm | 2.64e-09 | 315 |