FFCP PHASE1:Hg19::chr6:119215398..119215410,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25842 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20995 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000511766_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_ASF1A_5end | |||
|id=chr6:119215398..119215410,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.09e-10!53;CL:0000051!7.09e-10!53;CL:0000838!1.24e-09!52;CL:0000988!1.74e-09!182;CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0002032!2.27e-09!165;CL:0000837!2.27e-09!165;CL:0000084!2.12e-08!25;CL:0000827!2.12e-08!25;CL:0000791!2.57e-07!18;CL:0000789!2.57e-07!18;CL:0002420!2.57e-07!18;CL:0002419!2.57e-07!18;CL:0000790!2.57e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.14e-11;25!CL:0000791;6.87e-09;18!CL:0000789;6.87e-09;18!CL:0002419;6.87e-09;18!CL:0000625;8.91e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.71e-14,177;CL:0000037,7.44e-13,168;CL:0002032,1.02e-12,161;CL:0000837,1.02e-12,161;CL:0000084,4.84e-12,25;CL:0000827,4.84e-12,25;CL:0000791,1.65e-09,18;CL:0000789,1.65e-09,18;CL:0002420,1.65e-09,18;CL:0002419,1.65e-09,18;CL:0000790,1.65e-09,18;CL:0000838,1.38e-08,52;CL:0000542,2.69e-08,53;CL:0000051,2.69e-08,53;CL:0000625,3.50e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.87e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!5.04e-12!51;DOID:0060083!5.04e-12!51;DOID:1240!5.51e-10!39;DOID:162!1.97e-09!235;DOID:14566!4.53e-09!239;DOID:8692!6.60e-08!31;DOID:0050686!4.39e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.31e-15;39!DOID:8692;2.29e-14;31!DOID:1036;1.24e-11;8!DOID:2531;2.76e-11;51!DOID:0060083;2.76e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.10e-19,51;DOID:0060083,7.10e-19,51;DOID:1240,7.88e-17,39;DOID:8692,5.73e-15,31;DOID:1036,2.62e-11,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@ASF1A | |||
}} |
Revision as of 13:36, 22 January 2014
Short description: | p4@ASF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASF1A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 13bp_to_ENST00000511766_5end |
EntrezGene: | ASF1A |
HGNC: | 20995 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.71e-14 | 177 |
hematopoietic stem cell | 7.44e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-12 | 161 |
T cell | 4.84e-12 | 25 |
pro-T cell | 4.84e-12 | 25 |
mature alpha-beta T cell | 1.65e-09 | 18 |
alpha-beta T cell | 1.65e-09 | 18 |
immature T cell | 1.65e-09 | 18 |
mature T cell | 1.65e-09 | 18 |
immature alpha-beta T cell | 1.65e-09 | 18 |
lymphoid lineage restricted progenitor cell | 1.38e-08 | 52 |
lymphocyte | 2.69e-08 | 53 |
common lymphoid progenitor | 2.69e-08 | 53 |
CD8-positive, alpha-beta T cell | 3.50e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.10e-19 | 51 |
immune system cancer | 7.10e-19 | 51 |
leukemia | 7.88e-17 | 39 |
myeloid leukemia | 5.73e-15 | 31 |
chronic leukemia | 2.62e-11 | 8 |