FFCP PHASE1:Hg19::chr6:31239114..31239134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4933 | |||
|TSSclassifier=strong | |||
|UniProt=Q14838 | |||
|association_with_transcript=-132bp_to_M12679_5end | |||
|coexpression_cluster_id=C4591 | |||
|description=CAGE_peak_6_at_HLA-C_5end | |||
|id=chr6:31239114..31239134,- | |||
|ontology_enrichment_celltype=CL:0002057!1.32e-22!42;CL:0000766!1.71e-19!76;CL:0000860!1.87e-19!45;CL:0002009!4.24e-19!65;CL:0000738!9.09e-19!140;CL:0002194!1.28e-18!63;CL:0000576!1.28e-18!63;CL:0000040!1.28e-18!63;CL:0000559!1.28e-18!63;CL:0002087!8.96e-17!119;CL:0000557!1.85e-16!71;CL:0000839!6.97e-16!70;CL:0002031!1.80e-15!124;CL:0002032!9.91e-11!165;CL:0000837!9.91e-11!165;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000763!8.36e-10!112;CL:0000049!8.36e-10!112;CL:0000988!4.95e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-26;33!CL:0002057;1.08e-26;33!CL:0000576;1.29e-21;48!CL:0000473;1.46e-21;39!CL:0000234;1.46e-21;39!CL:0000766;4.57e-16;69!CL:0002087;3.27e-09;104!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18!CL:0000763;9.57e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.42e-35,42;CL:0002057,3.42e-35,42;CL:0000473,6.92e-35,48;CL:0000234,6.92e-35,48;CL:0000766,8.22e-29,72;CL:0002194,1.34e-26,59;CL:0000576,1.34e-26,59;CL:0000040,1.34e-26,59;CL:0000559,1.34e-26,59;CL:0002009,2.61e-25,61;CL:0000738,4.63e-25,136;CL:0002087,8.23e-24,115;CL:0000839,1.94e-22,66;CL:0000557,6.45e-22,67;CL:0002031,5.06e-21,120;CL:0002032,2.59e-17,161;CL:0000837,2.59e-17,161;CL:0000037,1.25e-16,168;CL:0000763,2.15e-15,108;CL:0000049,2.15e-15,108;CL:0000988,7.43e-15,177;CL:0002393,3.64e-07,9;CL:0002397,3.64e-07,9;CL:0000094,6.86e-07,8;CL:0000791,7.70e-07,18;CL:0000789,7.70e-07,18;CL:0002420,7.70e-07,18;CL:0002419,7.70e-07,18;CL:0000790,7.70e-07,18;CL:0000624,9.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.51e-26;42!CL:0000790;7.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-11!80;UBERON:0002390!1.98e-11!102;UBERON:0003061!1.98e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0001474!1.54e-10!86;UBERON:0002405!6.41e-10!115;UBERON:0003081!4.41e-08!216;UBERON:0004765!9.38e-08!101;UBERON:0001434!9.38e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.26e-18,76;UBERON:0002390,3.49e-17,98;UBERON:0003061,3.49e-17,98;UBERON:0001474,1.00e-16,82;UBERON:0002193,2.72e-15,108;UBERON:0002405,2.80e-15,93;UBERON:0004765,4.57e-15,90;UBERON:0001434,3.90e-13,100;UBERON:0003081,1.63e-09,203 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0,0,4.18680700783456,0.218441372130172,1.05506791291381,0,0,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0.626909442956176,0,0.410623275218653,0.251085279189606,0.916960868975415,0.492603536699674,0.865818594450472,3.14691421479123,4.60595277716655,1.85779347979291,0,0.30120591877825,0,0.0774672005803016,0,0,0.553995408531877,2.80762226458198,3.25516306073778,1.11957737119962,0.647787332037959,0,1.01778767145695,2.26725566213286,1.21292030593908,0.464858073811369,3.28934310417461,2.47765096716083,1.7261543539329,6.91633907628572,3.31075121844019,1.03423704220986,2.5819387343353,4.06279459783025,1.31769637679823,5.18521685109907,2.47195832889593,2.44867113896722,1.92557416245656,0.639337125799041,2.30895910130701,5.78444607102732,1.70489900213078,2.03146467040009,4.53908179752912,0.622822248995575,2.26123798731069,8.34372669472322,2.6062661364614,1.81619850790011,4.05105399586321,2.84816148696796,2.74631872205524,5.52771179909113,1.04829322754188,1.90958672949042,4.20495299956218,0.803627933485401,0.570025487482497,8.15558376516269,1.27864907635244,0,0,0,1.70692089026603,0.800791974072025,0,0,0,0,0,3.05818582500183,2.64342657158052,1.12101712596307,1.58030450865046,0.590129310341499,2.75107533924415,11.5136839439725,0.501559486172034,3.2592226663359,6.62826928028627,0,1.22551502573691,3.82987679717288,7.3106185212595,1.62482318259009,4.73937882984998,1.30059347559878,5.09757504271396,1.93445012450094,0.869409257205157,1.63115219478266,4.54819407752512,4.18142095219907,1.0197840842781,3.83220493601921,6.18529401868734,1.51811815211702,0.318565414324097,0,0,2.10805166708882,4.47953139040464,0,0.236777252044017,0,2.21767417547206,4.27904313253612,3.62061009706997,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0,3.89307896242109,0.189069634328136,0,0.087834785693126,0.458426764241994,0.364295288292542,0.370784442784429,0.97364218096405,0.696518949197069,0.797747763113191,0.238490624305342,0,0.74291500265913,0.39752481473341,0,0,0,0,0.550236083880135,0,0.258416759169329,2.49036383880697,0,0.402829317109147,0,2.4406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,15.8136500923276,0,0.436094052142534,0.993943903390637,0.25326102332916,0.397227542439656,0.860509862246441,0.354668382198357,2.24271040056923,0,0.74000264525148,0,0.269421344139376,0,0,0,0,0,0,0.448346041655403,0,0.323745888736263,0.421352420106746,0.204154171254893,0.61417158655884,0.619954687054593,0,1.23633464639278,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,1.05965950579781,0.300091096084402,0.412210116953756,0.257640540045629,0,0.675105328965065,0.779496041289589,0.252433774244115,0.368199594569197,0.161646056818812,0.710019185033229,0.10075209822764,0,1.93260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.72995471815166,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0.769494313892781,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0.368965315629341,0.514703430895577,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0.984868024349589,0.936017060556951,0.445893486866185,0,1.51183915378974,0.283550194484773,0,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,2.34434894420094,0,0.411309970813294,0,0.285826432630578,0,0,0,1.03417372606222,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,1.00451418286425,10.5416969741516,0,0,0,0,0,0.358121926479791,0.336255431980582,1.77327684181734,4.09692392233083,1.54011643535698,0.254094624222463,0,0,0,0,28.4622669099929,2.99161459204025,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0,0.368738337083406,0.695068915744663,0.979005787313703,0,0.206768026122887,1.94142780736755,0.640365346820666,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.710246901252508,0.0821271560138091,0,0.464841513839837,0.120859449591622,0.200506470303285,0.0920809889358963,0.574072240823034,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,1.01950509218015,2.49322802678617,0.895499018888713,0.219259876645935,0,0.512900250232778,0,0.325378394664303,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.770243085573222,0,0.413509717453592,0,0.580066775656914,0.0852266274161009,0,1.65284915360978,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0.949138274156178,0.38126038784765,0,0,0.318203247925937,0.784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| |||
|short_description=p6@HLA-C | |||
}} |
Revision as of 10:57, 22 January 2014
Short description: | p6@HLA-C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HLA-C_5end |
Coexpression cluster: | C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8 |
Association with transcript: | -132bp_to_M12679_5end |
EntrezGene: | HLA-C |
HGNC: | 4933 |
UniProt: | Q14838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.26e-18 | 76 |
hematopoietic system | 3.49e-17 | 98 |
blood island | 3.49e-17 | 98 |
bone element | 1.00e-16 | 82 |
hemolymphoid system | 2.72e-15 | 108 |
immune system | 2.80e-15 | 93 |
skeletal element | 4.57e-15 | 90 |
skeletal system | 3.90e-13 | 100 |
lateral plate mesoderm | 1.63e-09 | 203 |