FFCP PHASE1:Mm9::chr2:148269266..148269278,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17064|HGNC=|MCL_coexpression_id=2333|UniProt=O89103|association_with_transcript=0bp_to_NM_010740,uc008mte.1_5end|description=CAGE_peak_3_at_Cd93_5end|id=chr2:148269266..148269278,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.84e-09!14;UBERON:0000117!1.84e-09!14;UBERON:0000171!1.84e-09!14;UBERON:0000170!1.84e-09!14;UBERON:0005597!1.84e-09!14;UBERON:0000118!1.84e-09!14;UBERON:0007100!1.79e-08!18;UBERON:0000948!1.79e-08!18;UBERON:0005498!1.79e-08!18;UBERON:0004140!1.79e-08!18;UBERON:0009881!1.79e-08!18;UBERON:0004141!1.79e-08!18;UBERON:0003084!1.79e-08!18;UBERON:0007005!1.79e-08!18;UBERON:0004139!1.79e-08!18;UBERON:0004291!1.79e-08!18;UBERON:0005153!3.40e-08!17;UBERON:0000926!3.90e-08!193;UBERON:0004120!3.90e-08!193;UBERON:0006603!3.90e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.45e-10,14;UBERON:0000117,3.45e-10,14;UBERON:0000171,3.45e-10,14;UBERON:0000170,3.45e-10,14;UBERON:0005597,3.45e-10,14;UBERON:0000118,3.45e-10,14;UBERON:0007100,1.03e-08,18;UBERON:0000948,1.03e-08,18;UBERON:0005498,1.03e-08,18;UBERON:0004140,1.03e-08,18;UBERON:0009881,1.03e-08,18;UBERON:0004141,1.03e-08,18;UBERON:0003084,1.03e-08,18;UBERON:0007005,1.03e-08,18;UBERON:0004139,1.03e-08,18;UBERON:0004291,1.03e-08,18;UBERON:0005153,1.34e-08,17;UBERON:0005177,3.91e-07,79;UBERON:0005178,5.00e-07,17;UBERON:0005181,5.00e-07,17;UBERON:0002224,5.00e-07,17;UBERON:0000915,5.00e-07,17;UBERON:0008947,5.00e-07,17;UBERON:0003258,5.00e-07,17;UBERON:0004535,6.13e-07,23;UBERON:0001009,6.13e-07,23|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,1.53077922271926,5.36171136484781,4.17919662622297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0.771778308107841,1.43266719969378,1.54701627683233,0.404632921719196,0.528990979272033,1.26766280701236,0,0,4.49949858640699,4.94433181283487,4.9733608046227,0.599200221036809,0,1.24427534770173,0.675029691658453,1.47227472945967,0.856952953211411,1.10434270475807,0.367472397644862,0.575072826109418,0,0,0,0.153606533256243,1.05509030184155,1.00636407962651,0,0,0,0,0.589257170947335,1.13897344639282,0.372798891650601,0.605809546665472,0.604572480854284,11.0148505706638,1.72084775396277,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,1.7813056687779,2.60227990149204,2.13125834818499,2.53677046981664,1.80867168663147,5.99702406392095,2.76466500925286,1.73036477414062,2.02439099687876,0.884610551949874,5.66183974815932,2.20841518460394,3.39412677194655,0,0,0.209446706813455,0.766371165625774,9.22576458695586,4.79922184794726,8.51370521389534,0.149790639404823,0.457500602818626,0.753926112677186,0,0.255715457330331,0.41557608911912,0.324482526135515,3.56437773476107,1.8661045591514,0.252722758433675,0.420883711772948,1.56144531555244,1.37941262660084,2.88099407688559,1.50704817835715,1.90502197623718,2.0498195245576,1.03071897015702,2.32833033665114,1.5089759505299,1.32374256117473,0.879755620819744,1.97276159184817,1.94633074457919,2.78601733217733,3.2925141825271,1.59227413454795,3.51106593656617,2.83082697826187,4.26245249093389,4.55676699578104,5.8631514995274,6.48223421259654,9.70653415899362,5.3126342571799,5.86215028972037,7.20855228726264,5.36546802799238,9.10769670463922,7.07607354627966,10.1783827729039,8.10688095458557,8.04099930839328,9.44065495751518,8.99183005694491,0.210289948564127,1.9551876352064,0,0.264450566663544,1.91959425481711,2.32236671860439,2.31961430379768,2.8235693447268,1.77902435075896,2.85338439168839,0.474529061544512,0.988193728344065,2.76468729680296,1.98956472041151,2.72949721966768,0.898819408654221,0.648414149624083,1.99141273254367,3.22435431620239,2.28497025219458,6.76246414038483,4.88763186828754,1.93952487167626,4.55882829287071,4.17361145020098,1.77132177575523,4.23896565171712,2.22114895059241,0.296452627087149,0.83422552858047,0.589676985339609,0.674586337154561,1.01430060694251,0.72353147925725,2.29163266603278,1.72617682470486,1.78348749452539,1.09824565275233,1.43768206527355,3.72140947668503,1.87222603868736,2.02063102357689,1.79397413521912,0.482443521363367,11.6394509804961,2.65287976478679,4.88894929326078,4.75286240170527,5.39787571063555,6.53274404023081,7.61739650835244,14.2447562936193,17.0245955634686,16.1669223443606,14.8292934851463,18.0249646187312,12.9513736399422,21.5527097286452,7.53956419696361,4.35124547054968,1.47529281905711,2.20749397043786,0.481651769963376,0.820481806145422,0,7.32165688892682,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,2.98074178937364,2.31485284767432,2.93196526836437,2.8044920905331,0,2.18502572539483,1.81394134178851,3.39489143560617,2.65771703592696,3.99665692327106,4.13485269069154,2.54473610634254,3.20847640546249,3.47640433729398,2.10837217149998,1.03135543248187,0.680879211507576,1.62054984628179,2.97524972700335,3.42939256050548,4.07882537377229,4.8159580752559,4.27827453565514,3.04464949114599,1.40803024838226,1.48282449604674,0.441056796109924,0.8244312647074,2.09903754704677,2.53314284698255,1.67121281604391,1.47726809770555,0.874442509889552,0.556275906031529,0.854354403989263,5.15967169908056,2.96311243791539,1.13021074202815,0.820165366326151,0.457556346413045,8.66889992968662,8.11718423477216,8.43019840206985,0,2.21435195506795,2.64315307264903,2.37611749807963,0.627264888043406,1.52853794622324,2.02296519577231,2.23164330458407,1.04702376793612,0.777689839750757,0.621339313086926,0,1.79419855252775,1.98550188548517,2.33341426012857,2.19571699912143,2.19642963138012,2.22978753426933,1.43224823328345,1.04859344425711,0,0.288030006257865,0.316011120628178,1.41907650703115,1.84879722896689,0.909445760844565,1.07416017400489,0.993406773906324,0.600977247599844,0.590758108698309,0.908698049533329,0.838274873204998,0.907435666231565,0,0.192423683280659,0.701261413089414,0.453460767230423,0,0,0,2.12508553435409,2.43987218086537,1.83151624267265,0.428736758158132,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0,0.207574695168353,0.399024873401031,2.73173769206615,0.972426868273176,0.419226325255965,0.551530525350042,2.66696073361938,3.09052585858341,3.20919209591815,4.29585259998456,0.760437899670719,3.39527414494937,2.71560371662659,1.79270426733634,2.46972516509137,0,3.01299247456624,1.54327376370964,4.12085900803307,2.35518272215036,1.37147700954166,2.66213709239006,2.14592570952589,2.76158191601424,2.07040636913727,1.77690676572521,1.82927972872773,2.36762740294059,2.30866993537965,1.68342681497322,2.01679530811096,3.15214343601803,1.63692417267876,2.63392630016142,2.89359916471712,4.24677982494508,3.97683734357194,3.43793686477277,2.67803664896381,4.41182838239031,5.79669589051054|short_description=p3@Cd93}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17064 | |||
|HGNC= | |||
|MCL_coexpression_id=2333 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O89103 | |||
|association_with_transcript=0bp_to_NM_010740,uc008mte.1_5end | |||
|cluster_id=chr2:148269266..148269278,- | |||
|description=CAGE_peak_3_at_Cd93_5end | |||
|id=chr2:148269266..148269278,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.84e-09!14;UBERON:0000117!1.84e-09!14;UBERON:0000171!1.84e-09!14;UBERON:0000170!1.84e-09!14;UBERON:0005597!1.84e-09!14;UBERON:0000118!1.84e-09!14;UBERON:0007100!1.79e-08!18;UBERON:0000948!1.79e-08!18;UBERON:0005498!1.79e-08!18;UBERON:0004140!1.79e-08!18;UBERON:0009881!1.79e-08!18;UBERON:0004141!1.79e-08!18;UBERON:0003084!1.79e-08!18;UBERON:0007005!1.79e-08!18;UBERON:0004139!1.79e-08!18;UBERON:0004291!1.79e-08!18;UBERON:0005153!3.40e-08!17;UBERON:0000926!3.90e-08!193;UBERON:0004120!3.90e-08!193;UBERON:0006603!3.90e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.45e-10,14;UBERON:0000117,3.45e-10,14;UBERON:0000171,3.45e-10,14;UBERON:0000170,3.45e-10,14;UBERON:0005597,3.45e-10,14;UBERON:0000118,3.45e-10,14;UBERON:0007100,1.03e-08,18;UBERON:0000948,1.03e-08,18;UBERON:0005498,1.03e-08,18;UBERON:0004140,1.03e-08,18;UBERON:0009881,1.03e-08,18;UBERON:0004141,1.03e-08,18;UBERON:0003084,1.03e-08,18;UBERON:0007005,1.03e-08,18;UBERON:0004139,1.03e-08,18;UBERON:0004291,1.03e-08,18;UBERON:0005153,1.34e-08,17;UBERON:0005177,3.91e-07,79;UBERON:0005178,5.00e-07,17;UBERON:0005181,5.00e-07,17;UBERON:0002224,5.00e-07,17;UBERON:0000915,5.00e-07,17;UBERON:0008947,5.00e-07,17;UBERON:0003258,5.00e-07,17;UBERON:0004535,6.13e-07,23;UBERON:0001009,6.13e-07,23 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,1.53077922271926,5.36171136484781,4.17919662622297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0.771778308107841,1.43266719969378,1.54701627683233,0.404632921719196,0.528990979272033,1.26766280701236,0,0,4.49949858640699,4.94433181283487,4.9733608046227,0.599200221036809,0,1.24427534770173,0.675029691658453,1.47227472945967,0.856952953211411,1.10434270475807,0.367472397644862,0.575072826109418,0,0,0,0.153606533256243,1.05509030184155,1.00636407962651,0,0,0,0,0.589257170947335,1.13897344639282,0.372798891650601,0.605809546665472,0.604572480854284,11.0148505706638,1.72084775396277,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,1.7813056687779,2.60227990149204,2.13125834818499,2.53677046981664,1.80867168663147,5.99702406392095,2.76466500925286,1.73036477414062,2.02439099687876,0.884610551949874,5.66183974815932,2.20841518460394,3.39412677194655,0,0,0.209446706813455,0.766371165625774,9.22576458695586,4.79922184794726,8.51370521389534,0.149790639404823,0.457500602818626,0.753926112677186,0,0.255715457330331,0.41557608911912,0.324482526135515,3.56437773476107,1.8661045591514,0.252722758433675,0.420883711772948,1.56144531555244,1.37941262660084,2.88099407688559,1.50704817835715,1.90502197623718,2.0498195245576,1.03071897015702,2.32833033665114,1.5089759505299,1.32374256117473,0.879755620819744,1.97276159184817,1.94633074457919,2.78601733217733,3.2925141825271,1.59227413454795,3.51106593656617,2.83082697826187,4.26245249093389,4.55676699578104,5.8631514995274,6.48223421259654,9.70653415899362,5.3126342571799,5.86215028972037,7.20855228726264,5.36546802799238,9.10769670463922,7.07607354627966,10.1783827729039,8.10688095458557,8.04099930839328,9.44065495751518,8.99183005694491,0.210289948564127,1.9551876352064,0,0.264450566663544,1.91959425481711,2.32236671860439,2.31961430379768,2.8235693447268,1.77902435075896,2.85338439168839,0.474529061544512,0.988193728344065,2.76468729680296,1.98956472041151,2.72949721966768,0.898819408654221,0.648414149624083,1.99141273254367,3.22435431620239,2.28497025219458,6.76246414038483,4.88763186828754,1.93952487167626,4.55882829287071,4.17361145020098,1.77132177575523,4.23896565171712,2.22114895059241,0.296452627087149,0.83422552858047,0.589676985339609,0.674586337154561,1.01430060694251,0.72353147925725,2.29163266603278,1.72617682470486,1.78348749452539,1.09824565275233,1.43768206527355,3.72140947668503,1.87222603868736,2.02063102357689,1.79397413521912,0.482443521363367,11.6394509804961,2.65287976478679,4.88894929326078,4.75286240170527,5.39787571063555,6.53274404023081,7.61739650835244,14.2447562936193,17.0245955634686,16.1669223443606,14.8292934851463,18.0249646187312,12.9513736399422,21.5527097286452,7.53956419696361,4.35124547054968,1.47529281905711,2.20749397043786,0.481651769963376,0.820481806145422,0,7.32165688892682,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,2.98074178937364,2.31485284767432,2.93196526836437,2.8044920905331,0,2.18502572539483,1.81394134178851,3.39489143560617,2.65771703592696,3.99665692327106,4.13485269069154,2.54473610634254,3.20847640546249,3.47640433729398,2.10837217149998,1.03135543248187,0.680879211507576,1.62054984628179,2.97524972700335,3.42939256050548,4.07882537377229,4.8159580752559,4.27827453565514,3.04464949114599,1.40803024838226,1.48282449604674,0.441056796109924,0.8244312647074,2.09903754704677,2.53314284698255,1.67121281604391,1.47726809770555,0.874442509889552,0.556275906031529,0.854354403989263,5.15967169908056,2.96311243791539,1.13021074202815,0.820165366326151,0.457556346413045,8.66889992968662,8.11718423477216,8.43019840206985,0,2.21435195506795,2.64315307264903,2.37611749807963,0.627264888043406,1.52853794622324,2.02296519577231,2.23164330458407,1.04702376793612,0.777689839750757,0.621339313086926,0,1.79419855252775,1.98550188548517,2.33341426012857,2.19571699912143,2.19642963138012,2.22978753426933,1.43224823328345,1.04859344425711,0,0.288030006257865,0.316011120628178,1.41907650703115,1.84879722896689,0.909445760844565,1.07416017400489,0.993406773906324,0.600977247599844,0.590758108698309,0.908698049533329,0.838274873204998,0.907435666231565,0,0.192423683280659,0.701261413089414,0.453460767230423,0,0,0,2.12508553435409,2.43987218086537,1.83151624267265,0.428736758158132,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0,0.207574695168353,0.399024873401031,2.73173769206615,0.972426868273176,0.419226325255965,0.551530525350042,2.66696073361938,3.09052585858341,3.20919209591815,4.29585259998456,0.760437899670719,3.39527414494937,2.71560371662659,1.79270426733634,2.46972516509137,0,3.01299247456624,1.54327376370964,4.12085900803307,2.35518272215036,1.37147700954166,2.66213709239006,2.14592570952589,2.76158191601424,2.07040636913727,1.77690676572521,1.82927972872773,2.36762740294059,2.30866993537965,1.68342681497322,2.01679530811096,3.15214343601803,1.63692417267876,2.63392630016142,2.89359916471712,4.24677982494508,3.97683734357194,3.43793686477277,2.67803664896381,4.41182838239031,5.79669589051054 | |||
|short_description=p3@Cd93 | |||
}} |
Revision as of 05:30, 4 August 2015
Short description: | p3@Cd93 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd93_5end |
Coexpression cluster: | MCL_coexpression_mm9:2333 |
Association with transcript: | 0bp_to_NM_010740, uc008mte.1_5end |
EntrezGene: | 17064 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.45e-10 | 14 |
respiratory tube | 3.45e-10 | 14 |
respiration organ | 3.45e-10 | 14 |
pair of lungs | 3.45e-10 | 14 |
lung primordium | 3.45e-10 | 14 |
lung bud | 3.45e-10 | 14 |
primary circulatory organ | 1.03e-08 | 18 |
heart | 1.03e-08 | 18 |
primitive heart tube | 1.03e-08 | 18 |
primary heart field | 1.03e-08 | 18 |
anterior lateral plate mesoderm | 1.03e-08 | 18 |
heart tube | 1.03e-08 | 18 |
heart primordium | 1.03e-08 | 18 |
cardiac mesoderm | 1.03e-08 | 18 |
cardiogenic plate | 1.03e-08 | 18 |
heart rudiment | 1.03e-08 | 18 |
epithelial bud | 1.34e-08 | 17 |
trunk region element | 3.91e-07 | 79 |
thoracic cavity element | 5.00e-07 | 17 |
thoracic segment organ | 5.00e-07 | 17 |
thoracic cavity | 5.00e-07 | 17 |
thoracic segment of trunk | 5.00e-07 | 17 |
respiratory primordium | 5.00e-07 | 17 |
endoderm of foregut | 5.00e-07 | 17 |
cardiovascular system | 6.13e-07 | 23 |
circulatory system | 6.13e-07 | 23 |