FFCP PHASE1:Hg19::chr7:150498588..150498601,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55365 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24930 | |||
|TSSclassifier=strong | |||
|UniProt=C9JJ63 | |||
|association_with_transcript=-20bp_to_ENST00000461345_5end | |||
|coexpression_cluster_id=C1988 | |||
|description=CAGE_peak_6_at_TMEM176A_5end | |||
|id=chr7:150498588..150498601,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.72e-37!63;CL:0000576!9.72e-37!63;CL:0000040!9.72e-37!63;CL:0000559!9.72e-37!63;CL:0002009!3.68e-35!65;CL:0002057!8.10e-35!42;CL:0000860!1.06e-31!45;CL:0000839!1.29e-31!70;CL:0000557!5.74e-31!71;CL:0000766!7.67e-31!76;CL:0000763!9.74e-21!112;CL:0000049!9.74e-21!112;CL:0000738!9.16e-18!140;CL:0002087!3.29e-17!119;CL:0002031!3.43e-14!124;CL:0000037!3.44e-12!172;CL:0000566!3.44e-12!172;CL:0002032!3.04e-11!165;CL:0000837!3.04e-11!165;CL:0000988!1.06e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.90e-41;39!CL:0000234;6.90e-41;39!CL:0000860;2.16e-33;33!CL:0002057;2.16e-33;33!CL:0000576;8.89e-27;48!CL:0000766;5.10e-18;69!CL:0000235;7.74e-16;6!CL:0000763;1.23e-10;100!CL:0002087;8.04e-08;104!CL:0000453;2.26e-07;5!CL:0000738;3.23e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.96e-51,48;CL:0000234,3.96e-51,48;CL:0002194,2.51e-49,59;CL:0000576,2.51e-49,59;CL:0000040,2.51e-49,59;CL:0000559,2.51e-49,59;CL:0002009,1.77e-47,61;CL:0000839,2.42e-43,66;CL:0000557,1.37e-42,67;CL:0000766,3.96e-39,72;CL:0000860,2.12e-38,42;CL:0002057,2.12e-38,42;CL:0000763,1.43e-29,108;CL:0000049,1.43e-29,108;CL:0002087,2.15e-23,115;CL:0000738,2.30e-23,136;CL:0002031,1.67e-20,120;CL:0000037,2.53e-17,168;CL:0002032,3.75e-17,161;CL:0000837,3.75e-17,161;CL:0000988,5.08e-16,177;CL:0000235,9.31e-16,6;CL:0000453,2.27e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-27;42!CL:0000049;1.81e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.80e-28!102;UBERON:0003061!4.80e-28!102;UBERON:0002193!1.05e-26!112;UBERON:0002405!1.35e-26!115;UBERON:0002371!7.06e-26!80;UBERON:0001474!4.31e-23!86;UBERON:0004765!1.48e-18!101;UBERON:0001434!1.48e-18!101;UBERON:0007023!1.12e-13!115;UBERON:0003081!2.23e-10!216;UBERON:0002204!1.24e-09!167;UBERON:0000062!3.24e-08!511;UBERON:0000926!5.02e-07!448;UBERON:0004120!5.02e-07!448;UBERON:0006603!5.02e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-36,76;UBERON:0002405,2.61e-35,93;UBERON:0001474,1.84e-33,82;UBERON:0002193,2.72e-31,108;UBERON:0002390,6.94e-31,98;UBERON:0003061,6.94e-31,98;UBERON:0004765,7.92e-30,90;UBERON:0001434,4.24e-26,100;UBERON:0002204,6.41e-15,167;UBERON:0003081,9.62e-13,203;UBERON:0000926,2.92e-07,315;UBERON:0004120,2.92e-07,315;UBERON:0006603,2.92e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,3.25516306073778,0.447830948479849,1.94336199611388,8.49999373192816,1.74477886535478,0.377875943688809,2.18325655069035,1.85943229524548,0.411167888021826,1.23882548358041,3.45230870786581,1.7931249457037,2.60130452877444,1.03423704220986,0,1.35426486594342,2.44715041405386,0.545812300115692,1.34834090667051,1.22433556948361,0,1.91801137739712,2.96866170168044,0.398927315243264,2.98357325372886,1.16083695451434,0.56738522469114,0,3.01498398308092,0.521482918420201,2.17188844705117,1.21079900526674,0.736555271975129,0.632924774881769,0.422510572623884,14.882300997553,0,0.44931452458598,12.0141514273205,0,0,9.15016715115815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,1.39303789839414,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,30.4676437170064,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6161023633417,22.5919366678867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,2.00902836572851,10.5416969741516,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10982980369284,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0.537101224341368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31693898199955,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43736026136555,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,2.74551996579143,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,1.33969702408637,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,32.0949391755001,3.97520666736664,0,0,0,0,0.533937062838473,0.157204305099666,0,3.96932817449561,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,3.32162100783408,11.2860122036533,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31636551347685,0,0,0,0,0,1.54348316215889,0.655678681511872,19.753326447184,0.245148321753905,0,0.196308467114945,0,0,0,1.87967835959707,0.902410431630081,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.581300188524055,0.620747142958579,0,0.636471582781649,0,0.217716747896961,0,1.0776328482334,0.358611026963382,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@TMEM176A | |||
}} |
Revision as of 20:04, 22 January 2014
Short description: | p6@TMEM176A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM176A_5end |
Coexpression cluster: | C1988_Macrophage_CD14_Hepatocyte_Monocytederived_liver_migratory_CD14CD16 |
Association with transcript: | -20bp_to_ENST00000461345_5end |
EntrezGene: | TMEM176A |
HGNC: | 24930 |
UniProt: | C9JJ63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.96e-51 | 48 |
phagocyte | 3.96e-51 | 48 |
monopoietic cell | 2.51e-49 | 59 |
monocyte | 2.51e-49 | 59 |
monoblast | 2.51e-49 | 59 |
promonocyte | 2.51e-49 | 59 |
macrophage dendritic cell progenitor | 1.77e-47 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-43 | 66 |
granulocyte monocyte progenitor cell | 1.37e-42 | 67 |
myeloid leukocyte | 3.96e-39 | 72 |
classical monocyte | 2.12e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-38 | 42 |
myeloid cell | 1.43e-29 | 108 |
common myeloid progenitor | 1.43e-29 | 108 |
nongranular leukocyte | 2.15e-23 | 115 |
leukocyte | 2.30e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 1.67e-20 | 120 |
hematopoietic stem cell | 2.53e-17 | 168 |
hematopoietic oligopotent progenitor cell | 3.75e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-17 | 161 |
hematopoietic cell | 5.08e-16 | 177 |
macrophage | 9.31e-16 | 6 |
Langerhans cell | 2.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-36 | 76 |
immune system | 2.61e-35 | 93 |
bone element | 1.84e-33 | 82 |
hemolymphoid system | 2.72e-31 | 108 |
hematopoietic system | 6.94e-31 | 98 |
blood island | 6.94e-31 | 98 |
skeletal element | 7.92e-30 | 90 |
skeletal system | 4.24e-26 | 100 |
musculoskeletal system | 6.41e-15 | 167 |
lateral plate mesoderm | 9.62e-13 | 203 |
mesoderm | 2.92e-07 | 315 |
mesoderm-derived structure | 2.92e-07 | 315 |
presumptive mesoderm | 2.92e-07 | 315 |