FFCP PHASE1:Hg19::chr7:87835740..87835754,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11292 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-148bp_to_AL117616_5end | |||
|description=CAGE_peak_5_at_SRI_5end | |||
|id=chr7:87835740..87835754,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002616;2.37e-29;1!CL:0000746;7.42e-11;3!CL:0002541;9.90e-11;3!CL:0000737;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.33e-29,1;CL:0000746,7.42e-11,3;CL:0000513,7.42e-11,3;CL:0002541,1.20e-10,3;CL:0000737,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!CL:0000513;7.42e-11;3!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.28e-10!82;UBERON:0005743!1.08e-09!86;UBERON:0001049!1.79e-09!57;UBERON:0005068!1.79e-09!57;UBERON:0006241!1.79e-09!57;UBERON:0007135!1.79e-09!57;UBERON:0000073!6.56e-09!94;UBERON:0001016!6.56e-09!94;UBERON:0000955!1.18e-08!69;UBERON:0006238!1.18e-08!69;UBERON:0002616!1.35e-08!59;UBERON:0003075!5.98e-08!86;UBERON:0007284!5.98e-08!86;UBERON:0002346!1.13e-07!90;UBERON:0003080!1.27e-07!42;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41;UBERON:0007023!9.47e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0002771;1.15e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0005406;2.05e-15;2!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0002771,1.15e-15,2;UBERON:0005406,1.54e-15,2;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0000920,1.20e-10,3;UBERON:0001781,2.11e-08,4;UBERON:0001872,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.227586896570999,0,0,0.344743373241465,0,0,0,0.482385754501632,0,0.110579259931225,0,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.326465616318295,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0.485560759068186,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0,0.0870592065804026,0,0.171986032471617,0.19351266257817,0,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,3.66078794705889,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0.570930667089935,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0,0,0.319267718114302,0.41023272848151,0,0,0.161475645631851,1.42769420259154,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0,0.206686796501184,0,1.09394961803644,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0.171488009437418,0,0.131545547125698,0.236387681767936,0.333694205676207,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,1.1598144313382,0.485710993059139,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0,0,0.874238242015829,0,0,0,0.785233868459781,0.59409280065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| |||
|short_description=p5@SRI | |||
}} |
Revision as of 17:44, 22 January 2014
Short description: | p5@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SRI_5end |
Coexpression cluster: | NA |
Association with transcript: | -148bp_to_AL117616_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.33e-29 | 1 |
cardiac muscle cell | 7.42e-11 | 3 |
cardiac muscle myoblast | 7.42e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
striated muscle cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
middle temporal gyrus | 1.15e-15 | 2 |
perirenal fat | 1.54e-15 | 2 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
egg chorion | 1.20e-10 | 3 |
layer of retina | 2.11e-08 | 4 |
parietal lobe | 6.39e-07 | 5 |