FFCP PHASE1:Mm9::chr5:143725357..143725368,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:143725357..143725368,+|id=chr5:143725357..143725368,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,6.47e-21,6;CL:0000187,6.47e-21,6;CL:0000056,6.47e-21,6;CL:0000222,5.43e-18,7;CL:0000355,4.39e-14,9;CL:0000333,1.36e-13,10;CL:0000095,1.36e-13,10;CL:0000243,1.36e-13,10;CL:0000123,1.36e-13,10;CL:0000125,1.36e-13,10;CL:0000030,1.36e-13,10;CL:0000339,1.36e-13,10;CL:0000192,2.23e-11,3;CL:0000359,2.23e-11,3;CL:0002539,2.23e-11,3;CL:0000514,2.23e-11,3;CL:0002494,3.60e-11,3;CL:0000737,3.60e-11,3;CL:0000746,3.60e-11,3;CL:0000513,3.60e-11,3;CL:0002453,5.80e-10,8;CL:0002321,8.55e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.39e-14,9;UBERON:0002036,4.39e-14,9;UBERON:0002385,4.39e-14,9;UBERON:0000486,4.39e-14,9;UBERON:0007503,4.39e-14,9;UBERON:0001015,4.39e-14,9;UBERON:0002329,4.39e-14,9;UBERON:0003082,4.39e-14,9;UBERON:0003059,4.39e-14,9;UBERON:0007282,4.39e-14,9;UBERON:0004290,4.39e-14,9;UBERON:0009618,4.39e-14,9;UBERON:0000383,1.03e-12,10;UBERON:0007524,1.37e-11,11;UBERON:0003077,1.37e-11,11;UBERON:0007285,1.37e-11,11;UBERON:0001135,2.23e-11,3;UBERON:0004237,2.23e-11,3;UBERON:0004695,2.23e-11,3;UBERON:0002111,2.23e-11,3;UBERON:0004178,2.23e-11,3;UBERON:0000947,9.16e-09,4;UBERON:0001637,9.16e-09,4;UBERON:0004573,9.16e-09,4;UBERON:0003509,9.16e-09,4;UBERON:0004571,9.16e-09,4;UBERON:0010191,9.16e-09,4;UBERON:0004572,9.16e-09,4;UBERON:0000055,3.47e-07,5;UBERON:0007500,3.47e-07,5;UBERON:0001981,3.47e-07,5;UBERON:0002049,3.47e-07,5;UBERON:0007798,3.47e-07,5;UBERON:0004537,3.47e-07,5;UBERON:0006965,3.47e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.21652317463417,0.367093504323363,0,0.65407546914134,2.63623419281366,0.388859798148567,0,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,1.35537812827653,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,1.51452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.691846491768175,0.753613202763113,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.441683036920787,0,0,0.585561594023094,0,0,0,0,0,0,0,0.125654352112864,0.521472960576829,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0.360124259610698,0,0.136072998302656,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,1.3114795630134,0.252470927204373,0,0,0,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0.847328283455281,0,0,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0,0.516919220600519,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.423073039458382,0,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,1.24905288968973,0,0,0.956441660344217,0.441182838239031,0.231867835620421|short_description=p@chr5:143725357..143725368,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:143725357..143725368,+ | |||
|description=CAGE_peak_at_chr5:143725357..143725368,+ | |||
|id=chr5:143725357..143725368,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.47e-21,6;CL:0000187,6.47e-21,6;CL:0000056,6.47e-21,6;CL:0000222,5.43e-18,7;CL:0000355,4.39e-14,9;CL:0000333,1.36e-13,10;CL:0000095,1.36e-13,10;CL:0000243,1.36e-13,10;CL:0000123,1.36e-13,10;CL:0000125,1.36e-13,10;CL:0000030,1.36e-13,10;CL:0000339,1.36e-13,10;CL:0000192,2.23e-11,3;CL:0000359,2.23e-11,3;CL:0002539,2.23e-11,3;CL:0000514,2.23e-11,3;CL:0002494,3.60e-11,3;CL:0000737,3.60e-11,3;CL:0000746,3.60e-11,3;CL:0000513,3.60e-11,3;CL:0002453,5.80e-10,8;CL:0002321,8.55e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.39e-14,9;UBERON:0002036,4.39e-14,9;UBERON:0002385,4.39e-14,9;UBERON:0000486,4.39e-14,9;UBERON:0007503,4.39e-14,9;UBERON:0001015,4.39e-14,9;UBERON:0002329,4.39e-14,9;UBERON:0003082,4.39e-14,9;UBERON:0003059,4.39e-14,9;UBERON:0007282,4.39e-14,9;UBERON:0004290,4.39e-14,9;UBERON:0009618,4.39e-14,9;UBERON:0000383,1.03e-12,10;UBERON:0007524,1.37e-11,11;UBERON:0003077,1.37e-11,11;UBERON:0007285,1.37e-11,11;UBERON:0001135,2.23e-11,3;UBERON:0004237,2.23e-11,3;UBERON:0004695,2.23e-11,3;UBERON:0002111,2.23e-11,3;UBERON:0004178,2.23e-11,3;UBERON:0000947,9.16e-09,4;UBERON:0001637,9.16e-09,4;UBERON:0004573,9.16e-09,4;UBERON:0003509,9.16e-09,4;UBERON:0004571,9.16e-09,4;UBERON:0010191,9.16e-09,4;UBERON:0004572,9.16e-09,4;UBERON:0000055,3.47e-07,5;UBERON:0007500,3.47e-07,5;UBERON:0001981,3.47e-07,5;UBERON:0002049,3.47e-07,5;UBERON:0007798,3.47e-07,5;UBERON:0004537,3.47e-07,5;UBERON:0006965,3.47e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.21652317463417,0.367093504323363,0,0.65407546914134,2.63623419281366,0.388859798148567,0,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,1.35537812827653,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,1.51452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.691846491768175,0.753613202763113,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.441683036920787,0,0,0.585561594023094,0,0,0,0,0,0,0,0.125654352112864,0.521472960576829,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0.360124259610698,0,0.136072998302656,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,1.3114795630134,0.252470927204373,0,0,0,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0.847328283455281,0,0,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0,0.516919220600519,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.423073039458382,0,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,1.24905288968973,0,0,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr5:143725357..143725368,+ | |||
}} |
Latest revision as of 00:25, 4 August 2015
Short description: | p@chr5:143725357..143725368, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:143725357..143725368, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.47e-21 | 6 |
muscle cell | 6.47e-21 | 6 |
myoblast | 6.47e-21 | 6 |
mesodermal cell | 5.43e-18 | 7 |
multi-potent skeletal muscle stem cell | 4.39e-14 | 9 |
migratory neural crest cell | 1.36e-13 | 10 |
neuron associated cell | 1.36e-13 | 10 |
glial cell (sensu Vertebrata) | 1.36e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.36e-13 | 10 |
glial cell | 1.36e-13 | 10 |
glioblast | 1.36e-13 | 10 |
glioblast (sensu Vertebrata) | 1.36e-13 | 10 |
smooth muscle cell | 2.23e-11 | 3 |
vascular associated smooth muscle cell | 2.23e-11 | 3 |
aortic smooth muscle cell | 2.23e-11 | 3 |
smooth muscle myoblast | 2.23e-11 | 3 |
cardiocyte | 3.60e-11 | 3 |
striated muscle cell | 3.60e-11 | 3 |
cardiac muscle cell | 3.60e-11 | 3 |
cardiac muscle myoblast | 3.60e-11 | 3 |
oligodendrocyte precursor cell | 5.80e-10 | 8 |
embryonic cell | 8.55e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.39e-14 | 9 |
striated muscle tissue | 4.39e-14 | 9 |
muscle tissue | 4.39e-14 | 9 |
multilaminar epithelium | 4.39e-14 | 9 |
epithelial vesicle | 4.39e-14 | 9 |
musculature | 4.39e-14 | 9 |
somite | 4.39e-14 | 9 |
myotome | 4.39e-14 | 9 |
presomitic mesoderm | 4.39e-14 | 9 |
presumptive segmental plate | 4.39e-14 | 9 |
dermomyotome | 4.39e-14 | 9 |
trunk paraxial mesoderm | 4.39e-14 | 9 |
musculature of body | 1.03e-12 | 10 |
dense mesenchyme tissue | 1.37e-11 | 11 |
paraxial mesoderm | 1.37e-11 | 11 |
presumptive paraxial mesoderm | 1.37e-11 | 11 |
smooth muscle tissue | 2.23e-11 | 3 |
blood vessel smooth muscle | 2.23e-11 | 3 |
arterial system smooth muscle | 2.23e-11 | 3 |
artery smooth muscle tissue | 2.23e-11 | 3 |
aorta smooth muscle tissue | 2.23e-11 | 3 |
aorta | 9.16e-09 | 4 |
artery | 9.16e-09 | 4 |
systemic artery | 9.16e-09 | 4 |
arterial blood vessel | 9.16e-09 | 4 |
systemic arterial system | 9.16e-09 | 4 |
aortic system | 9.16e-09 | 4 |
arterial system | 9.16e-09 | 4 |
vessel | 3.47e-07 | 5 |
epithelial tube open at both ends | 3.47e-07 | 5 |
blood vessel | 3.47e-07 | 5 |
vasculature | 3.47e-07 | 5 |
vascular system | 3.47e-07 | 5 |
blood vasculature | 3.47e-07 | 5 |
vascular cord | 3.47e-07 | 5 |