FFCP PHASE1:Hg19::chr9:139553832..139553915,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:139553832..139553915,+ | |||
|id=chr9:139553832..139553915,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.35e-32!24;CL:0000115!1.38e-31!35;CL:0000071!7.84e-25!18;CL:0002546!7.84e-25!18;CL:0002078!2.82e-24!44;CL:0000213!3.02e-16!57;CL:0000215!3.02e-16!57;CL:1000413!1.12e-12!9;CL:0002543!1.53e-09!6;CL:0002544!5.75e-09!6;CL:0005020!6.68e-09!6;CL:0002138!6.68e-09!6;CL:0005022!6.68e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.79e-47;24!CL:0000071;2.05e-36;18!CL:0000115;5.07e-36;36!CL:0002078;1.26e-21;45!CL:1000413;3.81e-18;9!CL:0000213;2.38e-15;58!CL:0000215;2.38e-15;58!CL:0002543;1.62e-13;6!CL:0002544;1.37e-12;6!CL:0002138;1.60e-12;6!CL:0002144;4.87e-08;3!CL:0002618;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.32e-47,24;CL:0000115,9.66e-44,36;CL:0000071,1.66e-36,18;CL:0002546,1.66e-36,18;CL:0002078,4.14e-33,45;CL:0000213,1.23e-23,58;CL:0000215,1.23e-23,58;CL:1000413,3.16e-18,9;CL:0002543,1.59e-13,6;CL:0002544,1.16e-12,6;CL:0005020,1.45e-12,6;CL:0002138,1.45e-12,6;CL:0005022,1.45e-12,6;CL:0002144,4.88e-08,3;CL:0002618,1.97e-07,3;CL:0000222,3.83e-07,121;CL:0000076,9.04e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.05e-36;18!CL:0005022;1.60e-12;6!UBERON:0004872;2.43e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;6.07e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.98e-09,31;DOID:1240,9.93e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.84e-25!18;UBERON:0004638!7.84e-25!18;UBERON:0004852!7.84e-25!18;UBERON:0000487!4.20e-19!22;UBERON:0006914!1.26e-17!25;UBERON:0007023!3.71e-17!115;UBERON:0000055!1.44e-14!69;UBERON:0003915!1.12e-12!9;UBERON:0004700!1.12e-12!9;UBERON:0001917!1.12e-12!9;UBERON:0002049!2.26e-11!79;UBERON:0007798!2.26e-11!79;UBERON:0001009!3.19e-11!113;UBERON:0004872!6.66e-11!84;UBERON:0002465!2.21e-10!10;UBERON:0001981!4.47e-10!60;UBERON:0007500!4.47e-10!60;UBERON:0004537!4.47e-10!60;UBERON:0006965!4.47e-10!60;UBERON:0004535!7.40e-10!110;UBERON:0004111!8.51e-09!241;UBERON:0003914!2.23e-08!118;UBERON:0000477!2.46e-08!286;UBERON:0001473!2.72e-08!8;UBERON:0004536!2.72e-08!8;UBERON:0006558!2.72e-08!8;UBERON:0001638!6.04e-08!9;UBERON:0003920!6.04e-08!9;UBERON:0004582!6.04e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.05e-36;18!UBERON:0001986;2.05e-36;18!UBERON:0004852;2.05e-36;18!UBERON:0000487;9.35e-29;22!UBERON:0006914;1.25e-24;25!UBERON:0003915;3.81e-18;9!UBERON:0004700;3.81e-18;9!UBERON:0001917;3.81e-18;9!UBERON:0000490;5.45e-16;33!UBERON:0002465;2.68e-12;10!UBERON:0001638;1.38e-11;9!UBERON:0003920;1.38e-11;9!UBERON:0004582;1.38e-11;9!UBERON:0000055;2.29e-11;65!UBERON:0001473;3.61e-09;8!UBERON:0004536;3.61e-09;8!UBERON:0006558;3.61e-09;8!UBERON:0002405;1.06e-08;27!UBERON:0007500;3.55e-08;56!UBERON:0001981;3.55e-08;56!UBERON:0004537;3.55e-08;56!UBERON:0010523;4.87e-08;3!UBERON:0001915;4.87e-08;3!UBERON:0001982;4.87e-08;3!UBERON:0002049;4.33e-07;75!UBERON:0007798;4.33e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.66e-36,18;UBERON:0001986,1.66e-36,18;UBERON:0004852,1.66e-36,18;UBERON:0000487,7.91e-29,22;UBERON:0006914,1.08e-24,25;UBERON:0000055,9.50e-22,68;UBERON:0003915,3.16e-18,9;UBERON:0004700,3.16e-18,9;UBERON:0001917,3.16e-18,9;UBERON:0002049,8.96e-18,78;UBERON:0007798,8.96e-18,78;UBERON:0007500,6.06e-16,59;UBERON:0001981,6.06e-16,59;UBERON:0004537,6.06e-16,59;UBERON:0006965,6.06e-16,59;UBERON:0004872,2.32e-14,83;UBERON:0002465,3.08e-12,10;UBERON:0003914,5.87e-12,117;UBERON:0004535,6.27e-12,109;UBERON:0001638,1.40e-11,9;UBERON:0003920,1.40e-11,9;UBERON:0004582,1.40e-11,9;UBERON:0001009,2.26e-11,112;UBERON:0001473,3.37e-09,8;UBERON:0004536,3.37e-09,8;UBERON:0006558,3.37e-09,8;UBERON:0004111,1.66e-08,240;UBERON:0010523,4.88e-08,3;UBERON:0001915,4.88e-08,3;UBERON:0001982,4.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,111.568166947242,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.171328579026,68.9425532467289,44.2485262422129,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,25.2428257355715,12.9035189265919,22.9112731061012,6.21838736116411,7.97048928798821,6.60283300656162,11.076733226451,1.29208379584664,1.42306505074684,6.6944122552934,55.1876164439531,69.9450337261032,110.071987954224,8.45625084795498,1.62028389576352,10.9838665789418,19.0849966732244,16.441276150565,21.4643292452237,50.3110799571108,46.8996464461843,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0,0,2.2818872861778,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,5.60967095213783,0,1.47008711385542,0,0,7.08947888017685,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,48.940225791004,84.7263488015198,61.2618370195406,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,5.68666920354483,0.680374821106063,1.51141141271498,18.5072703228347,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.865615277858669,0,0.159426272728822,42.5104061151899,46.7273103122975,43.8164316238438,27.5928649233372,36.7844303328631,0,0,15.038068625404,33.8583555603207,0,0,0,0,0,0,0,0,0,0,0,4.9960795199673,23.9677908649344,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,1.10513566212459,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0.638002319463839,0,2.66517388009317,1.02193298195737,66.7166089678855,8.97543082260845,0,0,0,0,2.2251121057253,0,0,0,0,0.995261931078505,0.796118080530053,2.4441205797345,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,4.83962864194656,1.22429104652196,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,1.26085721434945,0,0.677942222341597,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,70.2606234368348,0,0,2.23425921017803,2.29160424011684,2.15361907373044,0.399358000997982,0.858452096273142,0.89268582976749,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,1.78345599658994,0,0,0.191915197319445,1.42939065274673,0.662091970365432,0,0,0,0,0,5.58229141095505,0,0.113312091520126,1.17241786942466,0,0,0.13223260174269,0,0,2.45611048905698,3.61569901729232,7.45630299624952,10.9156524798629,0,0,0,1.08803560673895,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0.781514011233092,0,0,0,0,0.781078098613847,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0.336283722218824,0,0,1.1531308121143,0,0,0.0679697329768317,0,0,0,0.941917114206168,0,0,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.923965261706223,0,2.4285549652957,0,0,0,0,0,0,0.463044948647668,1.31135736302374,0,1.71603825227734,0,0,0,0.4226557275834,0,2.25561403151649,5.54337836572764,0,0,0,0,0,3.21110498383179,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.535928260312357,0,0,1.0661699095049,2.14257988317366,0.387533459016037,0.558672428662721,0,2.22765053973577,4.85081253499726,2.39488422686657,1.71116650542641,1.01028079521881,1.00411087549747,1.33064142618405,0,0,0,0,0,2.2003459952916,2.44137706989443,2.66302709674205,5.23311863336668,0 | |||
|short_description=p@chr9:139553832..139553915,+ | |||
}} |
Revision as of 04:09, 23 January 2014
Short description: | p@chr9:139553832..139553915, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139553832..139553915, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.32e-47 | 24 |
endothelial cell | 9.66e-44 | 36 |
blood vessel endothelial cell | 1.66e-36 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.66e-36 | 18 |
meso-epithelial cell | 4.14e-33 | 45 |
lining cell | 1.23e-23 | 58 |
barrier cell | 1.23e-23 | 58 |
endothelial cell of artery | 3.16e-18 | 9 |
vein endothelial cell | 1.59e-13 | 6 |
aortic endothelial cell | 1.16e-12 | 6 |
lymphangioblast | 1.45e-12 | 6 |
endothelial cell of lymphatic vessel | 1.45e-12 | 6 |
vascular lymphangioblast | 1.45e-12 | 6 |
capillary endothelial cell | 4.88e-08 | 3 |
endothelial cell of umbilical vein | 1.97e-07 | 3 |
mesodermal cell | 3.83e-07 | 121 |
squamous epithelial cell | 9.04e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.66e-36 | 18 |
endothelium | 1.66e-36 | 18 |
cardiovascular system endothelium | 1.66e-36 | 18 |
simple squamous epithelium | 7.91e-29 | 22 |
squamous epithelium | 1.08e-24 | 25 |
vessel | 9.50e-22 | 68 |
endothelial tube | 3.16e-18 | 9 |
arterial system endothelium | 3.16e-18 | 9 |
endothelium of artery | 3.16e-18 | 9 |
vasculature | 8.96e-18 | 78 |
vascular system | 8.96e-18 | 78 |
epithelial tube open at both ends | 6.06e-16 | 59 |
blood vessel | 6.06e-16 | 59 |
blood vasculature | 6.06e-16 | 59 |
vascular cord | 6.06e-16 | 59 |
splanchnic layer of lateral plate mesoderm | 2.32e-14 | 83 |
lymphoid system | 3.08e-12 | 10 |
epithelial tube | 5.87e-12 | 117 |
cardiovascular system | 6.27e-12 | 109 |
vein | 1.40e-11 | 9 |
venous blood vessel | 1.40e-11 | 9 |
venous system | 1.40e-11 | 9 |
circulatory system | 2.26e-11 | 112 |
lymphatic vessel | 3.37e-09 | 8 |
lymph vasculature | 3.37e-09 | 8 |
lymphatic part of lymphoid system | 3.37e-09 | 8 |
anatomical conduit | 1.66e-08 | 240 |
microcirculatory vessel | 4.88e-08 | 3 |
endothelium of capillary | 4.88e-08 | 3 |
capillary | 4.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.98e-09 | 31 |
leukemia | 9.93e-09 | 39 |