FFCP PHASE1:Hg19::chr9:26947220..26947270,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9373 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9043 | |||
|TSSclassifier=strong | |||
|UniProt=E5RIM3 | |||
|association_with_transcript=0bp_to_ENST00000520884_5end | |||
|description=CAGE_peak_2_at_PLAA_5end | |||
|id=chr9:26947220..26947270,- | |||
|ontology_enrichment_celltype=CL:0000034!1.67e-13!444;CL:0000048!4.77e-13!430;CL:0000723!1.53e-12!436;CL:0000766!1.18e-10!76;CL:0000839!2.00e-09!70;CL:0000557!2.07e-09!71;CL:0002009!2.61e-09!65;CL:0002194!5.48e-09!63;CL:0000576!5.48e-09!63;CL:0000040!5.48e-09!63;CL:0000559!5.48e-09!63;CL:0000738!5.91e-09!140;CL:0002031!2.20e-08!124;CL:0002087!7.04e-08!119;CL:0000037!1.20e-07!172;CL:0000566!1.20e-07!172;CL:0000134!1.88e-07!358;CL:0002057!2.59e-07!42;CL:0000763!6.06e-07!112;CL:0000049!6.06e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.84e-14,441;CL:0000048,8.27e-14,427;CL:0000723,2.77e-13,433;CL:0000766,1.00e-11,72;CL:0000839,1.85e-10,66;CL:0000557,1.98e-10,67;CL:0002009,2.16e-10,61;CL:0002194,4.59e-10,59;CL:0000576,4.59e-10,59;CL:0000040,4.59e-10,59;CL:0000559,4.59e-10,59;CL:0000738,1.49e-09,136;CL:0002031,5.29e-09,120;CL:0002087,1.74e-08,115;CL:0000037,4.11e-08,168;CL:0000134,5.45e-08,354;CL:0000473,6.35e-08,48;CL:0000234,6.35e-08,48;CL:0000763,1.62e-07,108;CL:0000049,1.62e-07,108;CL:0000860,2.59e-07,42;CL:0002057,2.59e-07,42;CL:0002032,3.77e-07,161;CL:0000837,3.77e-07,161;CL:0002320,4.30e-07,361;CL:0000988,6.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.95e-11!167;UBERON:0001474!3.42e-08!86;UBERON:0002371!1.03e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.91e-11,167;UBERON:0000926,1.07e-09,315;UBERON:0004120,1.07e-09,315;UBERON:0006603,1.07e-09,315;UBERON:0001474,5.56e-09,82;UBERON:0002371,1.66e-08,76;UBERON:0003081,1.72e-07,203;UBERON:0002384,7.93e-07,371 | |||
|phase1_expression=11.4457378940451,7.27941781229343,9.3029906703341,13.009528785907,10.7270662662549,9.59572376510406,5.06599756336621,8.84407822797563,10.4474251279935,4.17747692052565,2.09340350391728,2.62129646556207,4.48403862988371,5.07442047136191,7.29074226601415,7.39557661096953,9.64311244838363,8.76372108464848,7.80692478064811,4.67860020691794,4.08001382488506,4.38836610069323,7.72837165253853,9.30746090495612,6.02604670055053,5.73100543109634,6.23964479819588,6.21815172378066,9.04737836752479,11.1310525448192,8.97933515233241,9.19421224478927,5.12050061923025,3.32778609150109,7.43685125570896,6.25544622944655,9.9824149373848,9.97191735357379,14.0381113229099,17.577880527984,9.85228086655667,13.6035339727971,7.7272670290256,6.68831898385998,10.2026504795979,6.30718559088322,9.99444858694444,11.9238687526329,8.3620720141678,18.9876978932619,17.4189280439788,13.2430048737608,7.58440497620561,15.4916324060118,9.47985406160392,7.71793592124679,6.82265375144614,7.41587498668779,13.4676912643197,8.02322567690234,9.59005688698562,11.2149442063483,10.5715738539465,7.2458207590558,20.0244374653723,19.2910976394988,15.5705562248894,17.0849092374585,18.251902144707,11.5110087693712,19.9781835869012,15.4676607114777,12.0255707227536,6.33765858935825,6.59073329891635,9.01532175686016,8.08766144254765,6.45760639218477,6.75047464127737,9.69043328720245,5.56966696157452,8.03722276564389,7.03984977845291,8.7382177801941,1.77901850772711,5.54749289336459,4.40435585739614,5.74752439954483,7.27149360063348,2.86216126360609,14.2303242277362,8.22132065119314,12.2327433000073,13.2171328579026,14.0127140745384,6.05783394982677,20.064396551611,19.6505381374582,11.308082444973,6.01871383406441,8.14805666583976,6.62826928028627,11.6896037044747,9.13565746458423,11.4896303915187,7.97522020501036,8.12411591295047,8.19784446244321,9.36427302431123,6.41307827954337,4.69795030235942,8.69409257205158,9.04548035288569,7.49114318651197,7.31748666634838,8.3848913596199,9.58051234004803,8.24705869158312,5.81945291644857,5.41561204350964,9.11516835398986,7.60361635558699,7.37818083481087,6.91127700233859,6.24653632761729,5.6826540490564,6.56902397536837,16.1285394579786,18.7208137048455,16.7996308504047,4.87613732627923,5.36560687762909,6.52099065402005,8.31310050484502,4.01070328508712,6.95263291011954,5.5670016293577,8.27279279514481,6.90104165297695,9.75609348835281,7.02678285545008,5.23916301990851,1.82147644146271,6.67411997011973,13.6309905334967,9.5771355514597,8.64226743372624,11.2090593423511,8.57992366170192,11.8866400425461,6.36039703573456,13.763753521698,7.98423153697467,11.3061588384802,9.22898759661793,8.25354125820202,9.40477349415648,6.71883573840255,11.7402866686614,7.02913286805807,7.25092770796465,4.56163263431108,6.83373761134875,12.5005447317595,5.67099363517232,10.5373679375214,6.51135180615892,9.90981028253236,1.53316637465883,7.59412527654503,3.29763139074733,14.495845917967,15.511210565933,4.36094052142534,8.94549513051573,8.48424428152684,23.0391974615001,14.0549944166919,10.2853830837524,10.6528744027038,7.47242970107935,7.4000264525148,5.91300967259556,8.35206166832066,7.84617134944602,6.65972681637698,8.64263886719998,3.74914290934075,11.8620829195522,10.8389646093445,7.77133138869366,9.86449788607625,8.41739310714284,11.5169661495844,6.32877930890169,8.72123652913553,5.78624374584287,8.31602000097437,8.65434252474949,9.10161361938026,4.31170885089743,6.22843621630045,8.75829639103749,11.9137569658199,9.65750765937843,3.98434134538726,7.21142682751665,8.28054937068154,16.5038464833753,7.26095121983129,7.41761654058466,13.2040082277137,4.43125875725287,11.8514648420989,7.44467425326359,14.5147645727489,6.04109431999431,15.1460264546469,6.35144300631865,6.14255015911485,18.8155084033806,8.46317625112178,6.27374191548804,9.08326009867495,5.18217629122586,4.30206893083506,10.0018439026268,10.0722623924329,7.43641234364918,13.0612929319367,5.04641701751257,7.2995471815166,7.8224766164908,6.43240938192885,1.38134921352481,6.50115099244771,10.1063127433742,9.34623720314767,9.27215795429559,11.5685294344071,10.5882213823098,9.80457498415828,9.72809538355496,9.43819157121151,7.45641567476315,8.46443745282059,6.64339909162183,4.20725321410337,3.2925920906512,2.94017422771084,5.07020139287323,4.91413608338813,10.6342183202653,8.82926198829301,1.72183813960359,7.03428022223955,8.23127140564692,5.62008766288098,5.93120937228622,4.72201070308501,3.58389135841357,6.23960871167747,5.77325368101093,5.91245065372892,11.0364172581672,4.90845922387651,6.01881166349594,5.70762456703795,7.11183958163348,6.86788929675898,13.5419353348069,11.4662089918226,10.8500748470772,0.93733833986777,3.52762469217605,4.67857820899875,7.7915914751478,7.84711633987697,3.83382679165211,24.6331618947972,7.04387472105808,5.1832028885193,7.92659743793288,6.69084897159814,9.52468414382536,6.11181480893244,5.86087236050235,1.71072446022705,7.60923446004594,10.2116639666932,5.43070221998099,7.84917590417525,7.41132117016576,9.75399201418635,11.5051827024422,0,13.524844040896,8.77595784730073,9.36066932202295,6.94459910507784,5.67396528093113,8.25908754949908,9.86548156241218,4.88359444852299,8.23240336780769,13.3551835560431,7.81862287233601,12.6712299669349,9.64606006590676,11.3299349618038,9.49743416229542,13.378615870531,7.03159928004977,4.21667878966063,8.86611965318856,12.6348129417525,11.4109524032575,10.2794727733981,7.80810025691457,11.6389626105932,3.58672460779287,15.1713685355484,15.5251853898852,17.839682042885,7.36874410245144,18.219579540067,13.1459098172208,10.7210409813983,10.8449587781038,10.4860983352606,8.97484377612075,17.8198670777495,6.25726607767613,7.00238729483548,4.06897535549603,7.27898015357825,4.63915370872621,5.20417969611984,4.68565659970853,13.2416283880196,11.3703752027992,5.17365356462525,12.6202863721733,8.29661258437664,6.69003831404238,5.09083009403126,3.43143423810856,9.09779314940704,10.7857100409308,10.0323904335238,5.45629628603267,1.66435439510497,3.93107381328584,9.42809669711352,16.1135071952466,4.77122160536225,9.99485364194467,9.21073048320066,9.65123526861645,2.96836132889982,10.4862591785806,10.4761417934745,9.44462294158805,7.2695620085707,10.3427236829364,2.05461064305758,6.6167135200084,6.90607417019222,8.15182581968708,6.19109971222838,9.04758463220026,3.15839729035188,8.16362573306797,5.49044838423799,4.38417673959782,7.07195913582267,3.4120015221269,6.12337338995456,7.77297297967702,6.16909010761157,3.52230368807009,1.50506932156456,3.56826782263054,1.66215201785745,4.25362033972139,13.374852475402,15.686127061494,5.12900250232778,3.28014645699706,6.83294628795036,4.84292754744295,18.2223234988503,19.4722419812588,8.03971753194641,3.25030123018261,9.64103579064957,4.25351160485337,9.24291702687866,12.1267903033642,9.9242332188862,6.87489567156951,8.26595155311102,11.0794615640931,11.1290044558422,6.61139661443912,4.22818148203234,7.40153732468588,6.97988687903294,6.507837690162,13.5369309137175,19.5170435644968,7.70083950440222,8.51689648507235,7.82939692867565,9.45153517429992,12.8812398067792,11.16475108079,10.1241415909992,11.8190720232771,5.62975140884935,8.13084077264449,6.36406495851874,6.27958912159384,7.55464321849922,8.78518495155375,8.48249296888942,6.2676569287728,19.021238540761,10.9527198622135,2.92580243453754,19.0096521912402,12.6780176108107,7.78049495025519,8.62573134917648,9.04064932961942,9.37321084028411,15.9225354057893,20.6071916069268,5.20897980840019,8.52663177660623,13.1891745025758,9.2947049429925,7.60578126837052,9.1783265410593,8.54766656814154,9.98678944147501,7.09522128141196,5.69990615303693,4.28083360847872,3.41525856389144,2.79947776195986,3.65644028356946,5.3624182042863,2.17781969722645,4.0481834334015,3.87454835404107,1.68471475667626,7.98174276366016,5.97280840538095,8.62660935694688,6.88173486428138,1.13929437434833,6.4322579373603,9.04997000789627,7.13320642311989,4.32025149790492,3.96562588147135,9.50734233034511,5.77487913158015,5.88096518354476,6.13150477914872,11.5415370381156,6.68733327475093,15.4643484546958,9.97896857164083,8.0432255455594,5.50351315082095,3.89546328329467,6.73913227472301,9.12938716132769,5.48379635205581,2.50634477090067,6.77167111206413,10.1170487315331,10.0899853595524,0,15.4577405140094,10.4461859864876,11.1838053946208,11.6794399198336,6.05703095746325,12.8066839991811,4.92349595790849,9.19549306818343,6.99451132795422,4.22961015263549,3.7428108081644,8.05794985995417,10.8010864357067,13.3732061132974,7.38753981696674,5.25237866422918,6.53322297831805,7.06469614828234,11.9297717731956,7.17414023693615,6.34459618630564,13.019506063914,4.85588438694385,9.16540745954921,6.90709788827869,2.01546198283421,3.78394125257973,6.0311554675924,9.02014804219242,6.91986303834417,3.9384658428634,9.20830266408369,6.70775158331149,7.18449277040819,3.33410970433911,17.4479894297139,10.6683312886129,19.9613798001194,3.38556089410803,6.90933999969946,6.52499617891314,2.73104275885199,2.2882828526349,7.09163045303809,13.1002481831757,12.8306029888632,6.07687482266523,9.74315524395223,6.99459344027366,1.52581736317083,6.19243855614858,7.38869047383869,8.33664509185096,7.08100012873436,9.62023835522363,6.92552326534174,5.12739251311505,10.1448117930746,5.02642808694724,3.80265801727028,4.46601623624687,6.04544116452291,3.73124343213044,6.13159789174419,8.47693384533134,5.98362054840563,4.06072189110925,5.88187602953219,4.36336126137191,10.6262090325544,5.2449071063525,3.16497096792041,2.44849212238722,0.848118428603645,5.40971599355228,3.98104772431402,5.39591143470369,3.05515072466813,8.89563386041866,5.56037725259263,5.42994137428368,7.48152576085515,8.82835412028668,10.3076356119149,4.56136973039165,7.04392628155523,5.09838797021595,3.15667522279512,3.62972148145992,14.385419796633,11.1208380146139,8.56843490662608,6.01391510104033,3.98792323624311,7.28182302926097,3.45326210247948,4.77889719091835,2.56148591426813,9.70722711091971,5.38035188838906,5.38958185779077,7.22591414617341,5.76598005198699,6.36348320144981,5.32159822089968,5.48169878146392,5.66596653667144,5.43138492335149,6.53095337517102,5.64951851951331,10.9633539717401,9.14087213833753,9.87648416911708,5.86654148204409,9.61905843018405,5.33632486848381,2.39771531498556,2.88180834308212,4.35239065430479,5.8342299273068,6.05030151550229,7.57940466949138,5.42096279618629,11.4159533101836,17.0502639489103,7.34387166981517,4.04530825862126,9.60672461935663,6.84526894459965,19.1619882100458,6.0167161798794,8.67528269121738,10.6127312483457,10.7705399285491,8.61447629492177,8.18683902045863,11.1598772515508,14.2829732762798,5.77777863385846,9.7280968556449,4.65983798109815,2.04836273998782,2.47247575143499,1.75249214020881,5.61036644634068,9.14471986310472,11.1332156573302,5.17572943223987,9.16292946250609,7.15205070305616,6.64704540846696,7.42413842119952,15.476039091159,11.7854139916568,3.01891218839339,6.46206799853425,3.77673034571986,7.81442490243608,5.73719485865103,8.25235348473615,10.0057345692271,21.1869430516938,8.13659320495199,9.23099322981312,10.3706578944152,11.1039702437199,8.38111340937412,4.59718116196298,4.43008856642096,10.7646486944119,6.30174604815755,6.62534444561107,9.17908990167009,4.76037366273684,3.42173675768659,4.9337051562167,5.01900839068165,6.4453765090863,10.7702154390271,6.94632430536731,6.91640711642805,5.35887432875942,10.8518013820931,10.33633826402,9.2755260788399,6.73960268879615,3.93447156851765,8.32386710126242,12.4049545195378,8.66386480803938,7.38626491168349,6.88091034828085,6.43388498913743,7.1410863382591,7.05578038174777,8.37368733346114,4.70112264379108,3.71104933608458,10.8222277061159,3.27834434064817,12.8979715463634,6.41795652413558,5.60911943633339,6.10286447652875,6.25029917407794,7.0439012490721,8.00830099436882,13.5015640354185,7.10785341687223,6.21748802331122,10.7934259492433,8.92061896116734,8.09645601894488,7.14209601630793,9.12353657249882,12.2287188696678,8.86966605079948,6.76159240487483,14.851403274583,15.0542171285725,6.54655173129214,6.87427565071926,6.96050639817741,9.55430132876678,6.0004164699473,8.58489262956982,6.06149079778654,20.1895837165842,11.9424294852528,8.57766365499703,4.4369029634086,8.61482516946635,24.3098598040026,7.83157454420696,8.23808668974842,0,4.38568099157414,0,5.01576499504378,5.91298542285754,4.86858885317099,7.59946751808637,0,7.18943867989,2.72804432375144,3.72021552877417,2.9441770966052,7.20741667462108,8.11050598887274,10.9882304146486,6.99955885492255,6.61488724103673,2.75543967457305,5.10764358210152,4.9708606567997,7.27373440141111,9.33115890049459,7.03419042170084,11.9685540650317,5.81883984866817,7.97230358801702,3.3946505990805,6.58982252315217,8.17976044109414,11.7315432774381,6.99609571437521,0,4.80342448971282,7.40619481750436,7.96238241118321,10.4693636907229,2.8339315265117,6.5449882213432,10.4609345762785,15.8805168619682,6.91572524642179,8.55820921848811,18.5600246336901,2.55184068102667,6.37036506077798,9.53828712312731,5.77628330751691,6.86487771840901,3.4517996303005,33.0200928713016,5.86640561124207,10.2869585038795,1.56302802246618,10.7381744737383,4.42184177277261,6.65352387976704,11.6164645543639,8.59185908475232,4.13373593002368,11.2245984043215,10.9394961803644,2.19303106742873,10.4204347461752,7.03484977438482,4.47168496738583,3.74991285114801,6.72567444437648,7.89055285507621,5.46389259243114,6.65267776219791,6.45310330312364,6.5165443586219,10.6032783443857,9.47127939305027,4.72775363535873,5.00541308514311,6.12246124234009,8.4842418554641,4.48435461302062,6.39211104356647,7.12561051021451,7.6440270061928,6.14698279919245,3.95034029331817,4.76589844009314,4.17259853526191,11.2239591062235,5.18040410407592,4.26796192734875,2.07377898544228,3.44181887056222,0.118332000730565,0,5.08064460229115,3.2074961596167,5.89392132762208,8.5998504507969,3.80308468112494,5.98716425052982,6.33973209907801,21.3651516272005,18.8899564615495,10.4383298820438,6.79995390282795,12.8666704904158,3.38216317774326,7.84872599131953,5.42141193787008,6.92625255496204,4.37792246343353,5.0163202770164,3.0598338470554,10.3469805199535,7.10930133086326,9.66273843116666,7.85233868459781,8.02025280883132,8.0304588240846,9.34599130782993,7.33074560242858,5.67229414167479,5.29688126402123,13.57009933403,10.9397410231864,1.28386186702669,3.65168194123259,3.66983426723633,6.30694165866386,14.3572121595798,9.17885117577348,9.5997151874883,3.1741610430924,10.7878555268358,10.6300394585226,9.08515780459957,7.94848476460997,11.9099473440428,7.22181455765191,16.726168077685,10.6886962106224,12.4058114372041,10.7804241895721,4.39516449665789,5.89521086343593,7.46252495512901,6.61971173516129,9.59552918554414,3.80903090341985,12.2718928688412,8.00763814416567,12.6709004716093,3.05506359735192,6.46775004666302,9.36182015956934,10.2669990325584,7.20666967256087,5.4508876098434,4.65724499164419,3.41893728166093,5.5498219856412,3.8614456457388,5.83863813692815,4.69281884806909,12.3463858624695,5.69654649642034,5.3260541934841,7.84967795005002,3.8468219076388 | |||
|short_description=p2@PLAA | |||
}} |
Revision as of 01:05, 23 January 2014
Short description: | p2@PLAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLAA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520884_5end |
EntrezGene: | PLAA |
HGNC: | 9043 |
UniProt: | E5RIM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.84e-14 | 441 |
multi fate stem cell | 8.27e-14 | 427 |
somatic stem cell | 2.77e-13 | 433 |
myeloid leukocyte | 1.00e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.85e-10 | 66 |
granulocyte monocyte progenitor cell | 1.98e-10 | 67 |
macrophage dendritic cell progenitor | 2.16e-10 | 61 |
monopoietic cell | 4.59e-10 | 59 |
monocyte | 4.59e-10 | 59 |
monoblast | 4.59e-10 | 59 |
promonocyte | 4.59e-10 | 59 |
leukocyte | 1.49e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.29e-09 | 120 |
nongranular leukocyte | 1.74e-08 | 115 |
hematopoietic stem cell | 4.11e-08 | 168 |
mesenchymal cell | 5.45e-08 | 354 |
defensive cell | 6.35e-08 | 48 |
phagocyte | 6.35e-08 | 48 |
myeloid cell | 1.62e-07 | 108 |
common myeloid progenitor | 1.62e-07 | 108 |
classical monocyte | 2.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.59e-07 | 42 |
hematopoietic oligopotent progenitor cell | 3.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-07 | 161 |
connective tissue cell | 4.30e-07 | 361 |
hematopoietic cell | 6.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.91e-11 | 167 |
mesoderm | 1.07e-09 | 315 |
mesoderm-derived structure | 1.07e-09 | 315 |
presumptive mesoderm | 1.07e-09 | 315 |
bone element | 5.56e-09 | 82 |
bone marrow | 1.66e-08 | 76 |
lateral plate mesoderm | 1.72e-07 | 203 |
connective tissue | 7.93e-07 | 371 |