FFCP PHASE1:Mm9::chr6:70676615..70676621,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=192|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:70676615..70676621,+|id=chr6:70676615..70676621,+|ontology_enrichment_celltype=CL:0000553!1.16e-14!6;CL:0000556!1.16e-14!6;CL:0000050!1.76e-09!9;CL:0002027!4.31e-08!3;CL:0002006!4.31e-08!3;CL:0002024!4.31e-08!3;CL:0000414!1.35e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,4.18e-40,6;CL:0000556,4.18e-40,6;CL:0000050,1.02e-26,9;CL:0002027,9.96e-21,3;CL:0002006,9.96e-21,3;CL:0002024,9.96e-21,3;CL:0000839,1.87e-18,13;CL:0000763,5.85e-15,16;CL:0002031,9.84e-13,25;CL:0000049,1.46e-12,19;CL:0000988,7.68e-10,32;CL:0002032,7.68e-10,32;CL:0000037,7.68e-10,32;CL:0000837,7.68e-10,32;CL:0000945,6.57e-08,1;CL:0000236,6.57e-08,1;CL:0000826,6.57e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!4.84e-09!6;UBERON:0004457!4.84e-09!6;UBERON:0000042!4.84e-09!6;UBERON:0004854!4.84e-09!6;UBERON:0009034!4.84e-09!6;UBERON:0002095!4.84e-09!6;UBERON:0004782!4.84e-09!6;UBERON:0003281!4.84e-09!6;UBERON:0009664!4.84e-09!6;UBERON:0002296!4.84e-09!6;UBERON:0005602!4.84e-09!6;UBERON:0001179!4.84e-09!6;UBERON:0006293!4.84e-09!6;UBERON:0002193!1.08e-08!48;UBERON:0002465!2.15e-08!3;UBERON:0004923!2.09e-07!24;UBERON:0003887!2.49e-07!10;UBERON:0000331!7.61e-07!3;UBERON:0002116!7.61e-07!3;UBERON:0001204!7.61e-07!3;UBERON:0001168!7.61e-07!3;UBERON:0007023!8.43e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.30e-21,3;UBERON:0002371,5.85e-15,16;UBERON:0001962,7.66e-15,2;UBERON:0001961,7.66e-15,2;UBERON:0001744,7.66e-15,2;UBERON:0001474,1.81e-14,22;UBERON:0004765,1.81e-14,22;UBERON:0001434,1.81e-14,22;UBERON:0002193,2.29e-13,48;UBERON:0002405,2.29e-13,48;UBERON:0002204,8.47e-10,32;UBERON:0000029,1.84e-08,1;UBERON:0001097,1.84e-08,1;UBERON:0003968,1.84e-08,1;UBERON:0001467,1.84e-08,1;UBERON:0003199,4.10e-08,1;UBERON:0002390,6.26e-07,45;UBERON:0003061,6.26e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66085380720723,6.2767332890846,3.49780939064073,7.5710919685977,9.04955261797876,3.81950686618227,0.0850432901510698,0,0,10.3995074815714,7.34109699414944,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,15.2773351351831,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4036045565939,0,0.185194527369712,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr6:70676615..70676621,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=192 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:70676615..70676621,+ | |||
|description=CAGE_peak_at_chr6:70676615..70676621,+ | |||
|id=chr6:70676615..70676621,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.16e-14!6;CL:0000556!1.16e-14!6;CL:0000050!1.76e-09!9;CL:0002027!4.31e-08!3;CL:0002006!4.31e-08!3;CL:0002024!4.31e-08!3;CL:0000414!1.35e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.18e-40,6;CL:0000556,4.18e-40,6;CL:0000050,1.02e-26,9;CL:0002027,9.96e-21,3;CL:0002006,9.96e-21,3;CL:0002024,9.96e-21,3;CL:0000839,1.87e-18,13;CL:0000763,5.85e-15,16;CL:0002031,9.84e-13,25;CL:0000049,1.46e-12,19;CL:0000988,7.68e-10,32;CL:0002032,7.68e-10,32;CL:0000037,7.68e-10,32;CL:0000837,7.68e-10,32;CL:0000945,6.57e-08,1;CL:0000236,6.57e-08,1;CL:0000826,6.57e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.84e-09!6;UBERON:0004457!4.84e-09!6;UBERON:0000042!4.84e-09!6;UBERON:0004854!4.84e-09!6;UBERON:0009034!4.84e-09!6;UBERON:0002095!4.84e-09!6;UBERON:0004782!4.84e-09!6;UBERON:0003281!4.84e-09!6;UBERON:0009664!4.84e-09!6;UBERON:0002296!4.84e-09!6;UBERON:0005602!4.84e-09!6;UBERON:0001179!4.84e-09!6;UBERON:0006293!4.84e-09!6;UBERON:0002193!1.08e-08!48;UBERON:0002465!2.15e-08!3;UBERON:0004923!2.09e-07!24;UBERON:0003887!2.49e-07!10;UBERON:0000331!7.61e-07!3;UBERON:0002116!7.61e-07!3;UBERON:0001204!7.61e-07!3;UBERON:0001168!7.61e-07!3;UBERON:0007023!8.43e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.30e-21,3;UBERON:0002371,5.85e-15,16;UBERON:0001962,7.66e-15,2;UBERON:0001961,7.66e-15,2;UBERON:0001744,7.66e-15,2;UBERON:0001474,1.81e-14,22;UBERON:0004765,1.81e-14,22;UBERON:0001434,1.81e-14,22;UBERON:0002193,2.29e-13,48;UBERON:0002405,2.29e-13,48;UBERON:0002204,8.47e-10,32;UBERON:0000029,1.84e-08,1;UBERON:0001097,1.84e-08,1;UBERON:0003968,1.84e-08,1;UBERON:0001467,1.84e-08,1;UBERON:0003199,4.10e-08,1;UBERON:0002390,6.26e-07,45;UBERON:0003061,6.26e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66085380720723,6.2767332890846,3.49780939064073,7.5710919685977,9.04955261797876,3.81950686618227,0.0850432901510698,0,0,10.3995074815714,7.34109699414944,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,15.2773351351831,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4036045565939,0,0.185194527369712,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr6:70676615..70676621,+ | |||
}} |
Latest revision as of 01:46, 6 August 2015
Short description: | p@chr6:70676615..70676621, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:70676615..70676621, + |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.18e-40 | 6 |
megakaryocyte | 4.18e-40 | 6 |
megakaryocyte-erythroid progenitor cell | 1.02e-26 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 9.96e-21 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.96e-21 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.96e-21 | 3 |
myeloid lineage restricted progenitor cell | 1.87e-18 | 13 |
myeloid cell | 5.85e-15 | 16 |
hematopoietic lineage restricted progenitor cell | 9.84e-13 | 25 |
common myeloid progenitor | 1.46e-12 | 19 |
hematopoietic cell | 7.68e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.68e-10 | 32 |
hematopoietic stem cell | 7.68e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.68e-10 | 32 |
lymphocyte of B lineage | 6.57e-08 | 1 |
B cell | 6.57e-08 | 1 |
pro-B cell | 6.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.30e-21 | 3 |
bone marrow | 5.85e-15 | 16 |
gut-associated lymphoid tissue | 7.66e-15 | 2 |
mucosa-associated lymphoid tissue | 7.66e-15 | 2 |
lymphoid tissue | 7.66e-15 | 2 |
bone element | 1.81e-14 | 22 |
skeletal element | 1.81e-14 | 22 |
skeletal system | 1.81e-14 | 22 |
hemolymphoid system | 2.29e-13 | 48 |
immune system | 2.29e-13 | 48 |
musculoskeletal system | 8.47e-10 | 32 |
lymph node | 1.84e-08 | 1 |
axillary lymph node | 1.84e-08 | 1 |
peripheral lymph node | 1.84e-08 | 1 |
shoulder | 1.84e-08 | 1 |
egg chamber | 4.10e-08 | 1 |
hematopoietic system | 6.26e-07 | 45 |
blood island | 6.26e-07 | 45 |