FFCP PHASE1:Hg19::chrX:15518894..15518905,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=660 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1079 | |||
|TSSclassifier=strong | |||
|UniProt=P51813 | |||
|association_with_transcript=0bp_to_NM_203281,uc004cwx.3_5end | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_2_at_BMX_5end | |||
|id=chrX:15518894..15518905,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.19e-60!24;CL:0000115!1.12e-46!35;CL:0000071!1.18e-44!18;CL:0002546!1.18e-44!18;CL:0002078!1.71e-38!44;CL:0000213!6.16e-28!57;CL:0000215!6.16e-28!57;CL:1000413!4.49e-26!9;CL:0002544!5.06e-18!6;CL:0005020!4.02e-17!6;CL:0002138!4.02e-17!6;CL:0005022!4.02e-17!6;CL:0002543!1.27e-12!6;CL:0002618!4.56e-10!3;CL:0000222!1.26e-09!119;CL:0000076!1.39e-09!62;CL:0002144!1.60e-09!3;CL:0002545!3.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.35e-144;24!CL:0000071;3.90e-106;18!CL:0000115;1.19e-94;36!CL:1000413;1.44e-60;9!CL:0002078;9.51e-56;45!CL:0000213;2.67e-42;58!CL:0000215;2.67e-42;58!CL:0002544;4.61e-41;6!CL:0002138;6.20e-39;6!CL:0002543;1.61e-28;6!CL:0002618;6.68e-22;3!CL:0002144;1.22e-20;3!CL:0000076;6.66e-17;63!CL:0002545;7.66e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.28e-144,24;CL:0000115,4.60e-112,36;CL:0000071,3.44e-106,18;CL:0002546,3.44e-106,18;CL:0002078,8.67e-89,45;CL:0000213,6.57e-68,58;CL:0000215,6.57e-68,58;CL:1000413,1.60e-60,9;CL:0002544,4.61e-41,6;CL:0005020,6.85e-39,6;CL:0002138,6.85e-39,6;CL:0005022,6.85e-39,6;CL:0000222,3.26e-30,121;CL:0002543,1.25e-28,6;CL:0000076,5.89e-28,63;CL:0002618,6.46e-22,3;CL:0002144,1.31e-20,3;CL:0002545,6.91e-15,2;CL:0002321,2.47e-13,250;CL:0000066,2.92e-13,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.90e-106;18!CL:0005022;6.20e-39;6!CL:0000222;8.57e-13;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.18e-44!18;UBERON:0004638!1.18e-44!18;UBERON:0004852!1.18e-44!18;UBERON:0000487!1.30e-35!22;UBERON:0006914!2.55e-34!25;UBERON:0003915!4.49e-26!9;UBERON:0004700!4.49e-26!9;UBERON:0001917!4.49e-26!9;UBERON:0004535!5.43e-24!110;UBERON:0000055!1.39e-23!69;UBERON:0001009!4.36e-23!113;UBERON:0002049!1.30e-19!79;UBERON:0007798!1.30e-19!79;UBERON:0001981!5.95e-16!60;UBERON:0007500!5.95e-16!60;UBERON:0004537!5.95e-16!60;UBERON:0006965!5.95e-16!60;UBERON:0003914!1.15e-15!118;UBERON:0004872!1.26e-14!84;UBERON:0002465!5.55e-13!10;UBERON:0001473!1.24e-12!8;UBERON:0004536!1.24e-12!8;UBERON:0006558!1.24e-12!8;UBERON:0004111!3.42e-12!241;UBERON:0001638!2.77e-11!9;UBERON:0003920!2.77e-11!9;UBERON:0004582!2.77e-11!9;UBERON:0000477!1.90e-10!286;UBERON:0000025!1.48e-09!194;UBERON:0001915!1.60e-09!3;UBERON:0001982!1.60e-09!3;UBERON:0000490!1.65e-08!138;UBERON:0003081!2.25e-07!216;UBERON:0007023!3.17e-07!115;UBERON:0005800!3.98e-07!2;UBERON:0001515!3.98e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.90e-106;18!UBERON:0001986;3.90e-106;18!UBERON:0004852;3.90e-106;18!UBERON:0000487;3.00e-86;22!UBERON:0006914;1.65e-75;25!UBERON:0003915;1.44e-60;9!UBERON:0004700;1.44e-60;9!UBERON:0001917;1.44e-60;9!UBERON:0000490;4.49e-51;33!UBERON:0000055;1.30e-31;65!UBERON:0001473;4.12e-29;8!UBERON:0004536;4.12e-29;8!UBERON:0006558;4.12e-29;8!UBERON:0007500;7.29e-24;56!UBERON:0001981;7.29e-24;56!UBERON:0004537;7.29e-24;56!UBERON:0002465;3.28e-23;10!UBERON:0002049;1.05e-20;75!UBERON:0007798;1.05e-20;75!UBERON:0010523;1.22e-20;3!UBERON:0001915;1.22e-20;3!UBERON:0001982;1.22e-20;3!UBERON:0001638;5.65e-19;9!UBERON:0003920;5.65e-19;9!UBERON:0004582;5.65e-19;9!UBERON:0003914;4.09e-17;74!UBERON:0005800;7.66e-15;2!UBERON:0001515;7.66e-15;2!UBERON:0002066;2.31e-13;5!UBERON:0001009;8.57e-13;112!UBERON:0004535;8.60e-12;109!UBERON:0001637;1.38e-11;42!UBERON:0003509;1.38e-11;42!UBERON:0004572;1.38e-11;42!UBERON:0000947;2.22e-11;21!UBERON:0010191;2.22e-11;21!UBERON:0000025;6.00e-10;93!UBERON:0004111;1.35e-09;130!UBERON:0002405;2.73e-08;27!UBERON:0010260;1.27e-07;9!UBERON:0004573;2.37e-07;33!UBERON:0004571;2.37e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.44e-106,18;UBERON:0001986,3.44e-106,18;UBERON:0004852,3.44e-106,18;UBERON:0000487,2.70e-86,22;UBERON:0006914,1.51e-75,25;UBERON:0003915,1.60e-60,9;UBERON:0004700,1.60e-60,9;UBERON:0001917,1.60e-60,9;UBERON:0000055,1.15e-52,68;UBERON:0002049,2.36e-45,78;UBERON:0007798,2.36e-45,78;UBERON:0004535,5.04e-37,109;UBERON:0001009,6.57e-36,112;UBERON:0007500,8.47e-34,59;UBERON:0001981,8.47e-34,59;UBERON:0004537,8.47e-34,59;UBERON:0006965,8.47e-34,59;UBERON:0001473,4.44e-29,8;UBERON:0004536,4.44e-29,8;UBERON:0006558,4.44e-29,8;UBERON:0004872,9.93e-26,83;UBERON:0002465,3.48e-23,10;UBERON:0010523,1.31e-20,3;UBERON:0001915,1.31e-20,3;UBERON:0001982,1.31e-20,3;UBERON:0003914,3.59e-19,117;UBERON:0001638,4.77e-19,9;UBERON:0003920,4.77e-19,9;UBERON:0004582,4.77e-19,9;UBERON:0005800,6.91e-15,2;UBERON:0001515,6.91e-15,2;UBERON:0004111,3.77e-14,240;UBERON:0002066,2.27e-13,5;UBERON:0001637,7.43e-12,42;UBERON:0003509,7.43e-12,42;UBERON:0004572,7.43e-12,42;UBERON:0000947,2.22e-11,21;UBERON:0010191,2.22e-11,21;UBERON:0000490,2.63e-11,148;UBERON:0003081,1.83e-10,203;UBERON:0000025,4.66e-10,192;UBERON:0010260,1.25e-07,9;UBERON:0004573,4.91e-07,33;UBERON:0004571,4.91e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,9.14307073886843,4.30117297553062,7.63709103536707,13.0020826642522,4.19499436209906,10.7296036356626,5.43386912995707,1.03366703667732,3.91342888955381,3.3472061276467,2.41697590265488,5.32190474002959,3.66093086322254,9.19157700864672,5.67099363517232,13.1270600577597,12.3491154944393,11.2611480483322,0,1.89853131913626,4.58004359826018,0,0,0,0,0,0,0,0,0,0,0,0,1.21239604862719,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.87676382089396,2.31492756288305,6.08813287150714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,1.29549549661284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83261613921294,0.687010689511529,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@BMX | |||
}} |
Revision as of 04:55, 23 January 2014
Short description: | p2@BMX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMX_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | 0bp_to_NM_203281, uc004cwx.3_5end |
EntrezGene: | BMX |
HGNC: | 1079 |
UniProt: | P51813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.28e-144 | 24 |
endothelial cell | 4.60e-112 | 36 |
blood vessel endothelial cell | 3.44e-106 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.44e-106 | 18 |
meso-epithelial cell | 8.67e-89 | 45 |
lining cell | 6.57e-68 | 58 |
barrier cell | 6.57e-68 | 58 |
endothelial cell of artery | 1.60e-60 | 9 |
aortic endothelial cell | 4.61e-41 | 6 |
lymphangioblast | 6.85e-39 | 6 |
endothelial cell of lymphatic vessel | 6.85e-39 | 6 |
vascular lymphangioblast | 6.85e-39 | 6 |
mesodermal cell | 3.26e-30 | 121 |
vein endothelial cell | 1.25e-28 | 6 |
squamous epithelial cell | 5.89e-28 | 63 |
endothelial cell of umbilical vein | 6.46e-22 | 3 |
capillary endothelial cell | 1.31e-20 | 3 |
thoracic aorta endothelial cell | 6.91e-15 | 2 |
embryonic cell | 2.47e-13 | 250 |
epithelial cell | 2.92e-13 | 253 |