FFCP PHASE1:Hg19::chr11:4718911..4718938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=81285 | |EntrezGene=entrezgene:81285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=15195 | |HGNC=HGNC:15195 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9H255 | |UniProt=uniprot:Q9H255 | ||
|association_with_transcript=133bp_to_ENST00000396950_5end | |association_with_transcript=133bp_to_ENST00000396950_5end | ||
|cluster_id=chr11:4718911..4718938,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_2_at_OR51E2_5end | |description=CAGE_peak_2_at_OR51E2_5end |
Revision as of 22:31, 23 July 2015
Short description: | p2@OR51E2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OR51E2_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 133bp_to_ENST00000396950_5end |
EntrezGene: | 81285 |
HGNC: | 15195 |
UniProt: | Q9H255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@OR51E2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.17e-17 | 3 |
visual pigment cell | 7.90e-13 | 4 |
smooth muscle cell of the umbilical artery | 4.39e-12 | 4 |
vascular associated smooth muscle cell | 3.07e-11 | 32 |
smooth muscle cell of the umbilical vein | 4.97e-11 | 2 |
smooth muscle cell of the internal thoracic artery | 1.24e-10 | 2 |
smooth muscle cell | 5.46e-08 | 43 |
smooth muscle myoblast | 5.46e-08 | 43 |
smooth muscle cell of the brain vasculature | 6.89e-08 | 3 |
peptide hormone secreting cell | 6.23e-07 | 1 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 6.17e-17 | 3 |
presumptive retinal pigmented epithelium | 6.17e-17 | 3 |
retina | 7.90e-15 | 6 |
photoreceptor array | 7.90e-15 | 6 |
posterior segment of eyeball | 7.90e-15 | 6 |
umbilical blood vessel | 6.27e-14 | 9 |
layer of retina | 7.90e-13 | 4 |
umbilical artery | 4.39e-12 | 4 |
internal thoracic artery | 1.24e-10 | 2 |
colon | 1.54e-09 | 9 |
Showing 1 to 10 of 18 entries