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FFCP PHASE1:Hg19::chr5:16179727..16179759,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=441061
|EntrezGene=entrezgene:441061
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=33609
|HGNC=HGNC:33609
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=A6NNE9
|UniProt=uniprot:A6NNE9
|association_with_transcript=137bp_to_NM_001102562,uc003jfo.2_5end
|association_with_transcript=137bp_to_NM_001102562,uc003jfo.2_5end
|cluster_id=chr5:16179727..16179759,-
|coexpression_cluster_id=C4389
|coexpression_cluster_id=C4389
|description=CAGE_peak_2_at_MARCH11_5end
|description=CAGE_peak_2_at_MARCH11_5end

Revision as of 12:36, 30 July 2015

Short description:p2@MARCH11
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_MARCH11_5end
Coexpression cluster:C4389_small_neuroblastoma_nonsmall_heart_cerebellum_medulloblastoma_temporal
Association with transcript: 137bp_to_NM_001102562, uc003jfo.2_5end
EntrezGene:441061
HGNC: 33609
UniProt: A6NNE9
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data