FFCP PHASE1:Hg19::chr5:16179727..16179759,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=441061 | |EntrezGene=entrezgene:441061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=33609 | |HGNC=HGNC:33609 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=A6NNE9 | |UniProt=uniprot:A6NNE9 | ||
|association_with_transcript=137bp_to_NM_001102562,uc003jfo.2_5end | |association_with_transcript=137bp_to_NM_001102562,uc003jfo.2_5end | ||
|cluster_id=chr5:16179727..16179759,- | |||
|coexpression_cluster_id=C4389 | |coexpression_cluster_id=C4389 | ||
|description=CAGE_peak_2_at_MARCH11_5end | |description=CAGE_peak_2_at_MARCH11_5end |
Revision as of 12:36, 30 July 2015
Short description: | p2@MARCH11 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCH11_5end |
Coexpression cluster: | C4389_small_neuroblastoma_nonsmall_heart_cerebellum_medulloblastoma_temporal |
Association with transcript: | 137bp_to_NM_001102562, uc003jfo.2_5end |
EntrezGene: | 441061 |
HGNC: | 33609 |
UniProt: | A6NNE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@MARCH11 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neocortex | 1.49e-40 | 20 |
regional part of forebrain | 2.49e-39 | 41 |
forebrain | 2.49e-39 | 41 |
anterior neural tube | 2.49e-39 | 41 |
future forebrain | 2.49e-39 | 41 |
regional part of nervous system | 1.37e-37 | 53 |
regional part of brain | 1.37e-37 | 53 |
regional part of cerebral cortex | 7.81e-37 | 22 |
neural tube | 2.07e-35 | 56 |
neural rod | 2.07e-35 | 56 |
Showing 1 to 10 of 65 entries
Ontology term | p-value | n |
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neuroendocrine tumor | 1.35e-10 | 6 |
lung small cell carcinoma | 1.53e-07 | 4 |
Showing 1 to 2 of 2 entries