FFCP PHASE2:Hg19::chr10:22605374..22605387,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:100532731,entrezgene:648,entrezgene:23412 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_pro...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=100532731,648,23412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1066,23332 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T8Z1 | ||
|association_with_transcript=0bp_to_ENST00000417470,ENST00000479958_5end | |association_with_transcript=0bp_to_ENST00000417470,ENST00000479958_5end | ||
|cluster_id=chr10:22605374..22605387,+ | |cluster_id=chr10:22605374..22605387,+ |
Latest revision as of 14:47, 17 September 2015
Short description: | p2@COMMD3, p4@BMI1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COMMD3_5end, CAGE_peak_4_at_BMI1_5end |
Coexpression cluster: | C2050_chronic_acute_prostate_large_Mast_nonsmall_breast |
Association with transcript: | 0bp_to_ENST00000417470, ENST00000479958_5end |
EntrezGene: | 100532731,648,23412 |
HGNC: | 23332&submit=Submit 1066, 23332 |
UniProt: | Q5T8Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@COMMD3p4@BMI1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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nervous system | 2.44e-10 | 89 |
neural tube | 1.27e-09 | 56 |
neural rod | 1.27e-09 | 56 |
future spinal cord | 1.27e-09 | 56 |
neural keel | 1.27e-09 | 56 |
regional part of forebrain | 7.59e-09 | 41 |
forebrain | 7.59e-09 | 41 |
anterior neural tube | 7.59e-09 | 41 |
future forebrain | 7.59e-09 | 41 |
central nervous system | 8.43e-09 | 81 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
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myeloid leukemia | 1.13e-11 | 31 |
leukemia | 9.70e-09 | 39 |
Showing 1 to 2 of 2 entries