FFCP PHASE1:Hg19::chr1:151762943..151763012,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=11022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11713 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5SZR4,Q9Y2W6,B7ZAG4,Q5SZR5 | ||
|association_with_transcript=0bp_to_ENST00000368823,ENST00000368824,ENST00000368825,ENST00000368827,ENST00000458431,ENST00000463553,ENST00000486986,ENST00000525790,NM_001083963,NM_001083964,NM_001083965,NM_006862,uc001eyy.2,uc001eza.3,uc001ezb.3,uc001ezc.3,uc001ezd.3,uc009wnb.1,uc010pdn.1_5end | |association_with_transcript=0bp_to_ENST00000368823,ENST00000368824,ENST00000368825,ENST00000368827,ENST00000458431,ENST00000463553,ENST00000486986,ENST00000525790,NM_001083963,NM_001083964,NM_001083965,NM_006862,uc001eyy.2,uc001eza.3,uc001ezb.3,uc001ezc.3,uc001ezd.3,uc009wnb.1,uc010pdn.1_5end | ||
|cluster_id=chr1:151762943..151763012,- | |cluster_id=chr1:151762943..151763012,- |
Latest revision as of 01:36, 17 September 2015
Short description: | p1@TDRKH |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TDRKH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368823, ENST00000368824, ENST00000368825, ENST00000368827, ENST00000458431, ENST00000463553, ENST00000486986, ENST00000525790, NM_001083963, NM_001083964, NM_001083965, NM_006862, uc001eyy.2, uc001eza.3, uc001ezb.3, uc001ezc.3, uc001ezd.3, uc009wnb.1, uc010pdn.1_5end |
EntrezGene: | TDRKH |
HGNC: | 11713 |
UniProt: | Q5SZR4Q9Y2W6B7ZAG4Q5SZR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TDRKH |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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nervous system | 6.21e-25 | 89 |
central nervous system | 1.44e-23 | 81 |
neural tube | 1.17e-21 | 56 |
neural rod | 1.17e-21 | 56 |
future spinal cord | 1.17e-21 | 56 |
neural keel | 1.17e-21 | 56 |
brain | 6.50e-21 | 68 |
future brain | 6.50e-21 | 68 |
regional part of nervous system | 8.33e-21 | 53 |
regional part of brain | 8.33e-21 | 53 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
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cancer | 9.05e-16 | 235 |
cell type cancer | 1.17e-15 | 143 |
carcinoma | 2.27e-15 | 106 |
disease of cellular proliferation | 2.83e-15 | 239 |
organ system cancer | 4.35e-09 | 137 |
Showing 1 to 5 of 5 entries