FFCP PHASE2:Hg19::chr3:42775137..42775160,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:152206 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26358 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=152206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26358 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 06:50, 18 September 2015
Short description: | p3@CCDC13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC13_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -101bp_to_ENST00000472921_5end |
EntrezGene: | CCDC13 |
HGNC: | 26358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@CCDC13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 3.24e-70 | 56 |
neural rod | 3.24e-70 | 56 |
future spinal cord | 3.24e-70 | 56 |
neural keel | 3.24e-70 | 56 |
regional part of nervous system | 7.25e-55 | 53 |
regional part of brain | 7.25e-55 | 53 |
neural plate | 5.06e-52 | 82 |
presumptive neural plate | 5.06e-52 | 82 |
brainstem | 1.10e-51 | 6 |
neurectoderm | 1.72e-49 | 86 |
Showing 1 to 10 of 99 entries