FFCP PHASE2:Hg19::chr4:57774884..57774924,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5978 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9966 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9966 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13127 | ||
|association_with_transcript=-154bp_to_ENST00000511065,NM_001193508_5end | |association_with_transcript=-154bp_to_ENST00000511065,NM_001193508_5end | ||
|cluster_id=chr4:57774884..57774924,+ | |cluster_id=chr4:57774884..57774924,+ | ||
Latest revision as of 03:14, 18 September 2015
| Short description: | p4@REST |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_REST_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -154bp_to_ENST00000511065, NM_001193508_5end |
| EntrezGene: | REST |
| HGNC: | 9966 |
| UniProt: | Q13127 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@REST |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 5.64e-19 | 42 |
| CD14-positive, CD16-negative classical monocyte | 5.64e-19 | 42 |
| myeloid cell | 1.08e-16 | 108 |
| common myeloid progenitor | 1.08e-16 | 108 |
| monopoietic cell | 2.45e-16 | 59 |
| monocyte | 2.45e-16 | 59 |
| monoblast | 2.45e-16 | 59 |
| promonocyte | 2.45e-16 | 59 |
| macrophage dendritic cell progenitor | 2.56e-16 | 61 |
| defensive cell | 4.21e-16 | 48 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 1.66e-13 | 203 |
| bone marrow | 2.96e-13 | 76 |
| bone element | 3.75e-12 | 82 |
| immune system | 4.18e-11 | 93 |
| blood vessel endothelium | 7.16e-11 | 18 |
| endothelium | 7.16e-11 | 18 |
| cardiovascular system endothelium | 7.16e-11 | 18 |
| skeletal element | 1.73e-10 | 90 |
| skeletal system | 2.26e-09 | 100 |
| simple squamous epithelium | 3.63e-09 | 22 |
Showing 1 to 10 of 29 entries
