FFCP PHASE1:Mm9::chr7:20281798..20281809,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:20281798..20281809,- | |id=chr7:20281798..20281809,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.67e-12,4;CL:0000766,1.67e-12,4;CL:0000234,1.67e-12,4;CL:0000576,1.67e-12,4;CL:0000235,1.67e-12,4;CL:0000864,1.67e-12,4;CL:0002009,1.67e-12,4;CL:0000040,1.67e-12,4;CL:0000559,1.67e-12,4;CL:0000182,1.34e-10,5;CL:0002092,1.90e-10,3;CL:0002540,1.90e-10,3;CL:0002320,1.63e-07,46;CL:0000134,1.63e-07,46;CL:0000878,2.85e-07,2;CL:0000129,2.85e-07,2;CL:0000473,3.75e-07,7;CL:0000557,3.75e-07,7;CL:0002476,7.42e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.92e-16!22;UBERON:0007499!2.92e-16!22;UBERON:0006925!2.92e-16!22;UBERON:0009497!2.92e-16!22;UBERON:0000015!2.92e-16!22;UBERON:0002423!2.92e-16!22;UBERON:0006235!2.92e-16!22;UBERON:0008835!2.92e-16!22;UBERON:0003894!2.92e-16!22;UBERON:0004161!2.92e-16!22;UBERON:0008836!2.92e-16!22;UBERON:0009854!3.28e-15!23;UBERON:0009856!3.28e-15!23;UBERON:0002365!2.26e-13!25;UBERON:0002330!2.26e-13!25;UBERON:0002405!2.39e-09!70;UBERON:0005172!1.04e-08!49;UBERON:0005173!1.04e-08!49;UBERON:0002417!1.04e-08!49;UBERON:0000916!1.04e-08!49;UBERON:0005256!2.79e-08!47 | |ontology_enrichment_uberon=UBERON:0002107!2.92e-16!22;UBERON:0007499!2.92e-16!22;UBERON:0006925!2.92e-16!22;UBERON:0009497!2.92e-16!22;UBERON:0000015!2.92e-16!22;UBERON:0002423!2.92e-16!22;UBERON:0006235!2.92e-16!22;UBERON:0008835!2.92e-16!22;UBERON:0003894!2.92e-16!22;UBERON:0004161!2.92e-16!22;UBERON:0008836!2.92e-16!22;UBERON:0009854!3.28e-15!23;UBERON:0009856!3.28e-15!23;UBERON:0002365!2.26e-13!25;UBERON:0002330!2.26e-13!25;UBERON:0002405!2.39e-09!70;UBERON:0005172!1.04e-08!49;UBERON:0005173!1.04e-08!49;UBERON:0002417!1.04e-08!49;UBERON:0000916!1.04e-08!49;UBERON:0005256!2.79e-08!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.94e-28,22;UBERON:0007499,6.94e-28,22;UBERON:0006925,6.94e-28,22;UBERON:0009497,6.94e-28,22;UBERON:0000015,6.94e-28,22;UBERON:0002423,6.94e-28,22;UBERON:0006235,6.94e-28,22;UBERON:0008835,6.94e-28,22;UBERON:0003894,6.94e-28,22;UBERON:0004161,6.94e-28,22;UBERON:0008836,6.94e-28,22;UBERON:0009854,1.57e-26,23;UBERON:0009856,1.57e-26,23;UBERON:0002365,3.78e-24,25;UBERON:0002330,3.78e-24,25;UBERON:0005256,5.63e-12,45;UBERON:0003914,2.49e-11,47;UBERON:0005172,9.75e-11,49;UBERON:0005173,9.75e-11,49;UBERON:0002417,9.75e-11,49;UBERON:0000916,9.75e-11,49;UBERON:0003929,3.21e-09,55;UBERON:0002371,9.37e-09,16;UBERON:0002368,3.44e-08,60;UBERON:0003104,5.27e-08,61;UBERON:0009142,5.27e-08,61;UBERON:0000025,7.61e-08,114;UBERON:0002384,1.63e-07,46;UBERON:0002530,2.54e-07,65;UBERON:0000490,3.66e-07,66;UBERON:0009569,3.66e-07,66;UBERON:0004111,4.95e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,11.2487464660175,14.8329954385046,10.6572017241915,5.09320187881288,6.53171119046643,0,0,0,0.285650984403804,1.54607978666129,0,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,1.06958773443767,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0.289864488701678,4.30211938490693,10.1995700056163,3.77792234146472,31.8390444549358,12.5447528387254,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.763877555344259,2.5892652370573,1.45921704097532,1.64736847912849,18.6898668485561,2.23284568601102,1.87222603868736,2.52578877947112,1.4351793081753,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,3.01582567878545,2.17562273527484,0,0,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.343706364687375,1.37016503954128,1.5107877947794,0,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.0985044823755635,1.22769312950907,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,11.2487464660175,14.8329954385046,10.6572017241915,5.09320187881288,6.53171119046643,0,0,0,0.285650984403804,1.54607978666129,0,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,1.06958773443767,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0.289864488701678,4.30211938490693,10.1995700056163,3.77792234146472,31.8390444549358,12.5447528387254,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.763877555344259,2.5892652370573,1.45921704097532,1.64736847912849,18.6898668485561,2.23284568601102,1.87222603868736,2.52578877947112,1.4351793081753,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,3.01582567878545,2.17562273527484,0,0,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.343706364687375,1.37016503954128,1.5107877947794,0,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.0985044823755635,1.22769312950907,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr7:20281798..20281809,- | |short_description=p@chr7:20281798..20281809,- | ||
}} | }} |
Revision as of 14:46, 13 November 2012
Short description: | p@chr7:20281798..20281809, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20281798..20281809, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.67e-12 | 4 |
myeloid leukocyte | 1.67e-12 | 4 |
phagocyte | 1.67e-12 | 4 |
monocyte | 1.67e-12 | 4 |
macrophage | 1.67e-12 | 4 |
tissue-resident macrophage | 1.67e-12 | 4 |
macrophage dendritic cell progenitor | 1.67e-12 | 4 |
monoblast | 1.67e-12 | 4 |
promonocyte | 1.67e-12 | 4 |
hepatocyte | 1.34e-10 | 5 |
bone marrow cell | 1.90e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.90e-10 | 3 |
connective tissue cell | 1.63e-07 | 46 |
mesenchymal cell | 1.63e-07 | 46 |
central nervous system macrophage | 2.85e-07 | 2 |
microglial cell | 2.85e-07 | 2 |
defensive cell | 3.75e-07 | 7 |
granulocyte monocyte progenitor cell | 3.75e-07 | 7 |
bone marrow macrophage | 7.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 6.94e-28 | 22 |
epithelial sac | 6.94e-28 | 22 |
digestive gland | 6.94e-28 | 22 |
epithelium of foregut-midgut junction | 6.94e-28 | 22 |
anatomical boundary | 6.94e-28 | 22 |
hepatobiliary system | 6.94e-28 | 22 |
foregut-midgut junction | 6.94e-28 | 22 |
hepatic diverticulum | 6.94e-28 | 22 |
liver primordium | 6.94e-28 | 22 |
septum transversum | 6.94e-28 | 22 |
liver bud | 6.94e-28 | 22 |
digestive tract diverticulum | 1.57e-26 | 23 |
sac | 1.57e-26 | 23 |
exocrine gland | 3.78e-24 | 25 |
exocrine system | 3.78e-24 | 25 |
trunk mesenchyme | 5.63e-12 | 45 |
epithelial tube | 2.49e-11 | 47 |
abdomen element | 9.75e-11 | 49 |
abdominal segment element | 9.75e-11 | 49 |
abdominal segment of trunk | 9.75e-11 | 49 |
abdomen | 9.75e-11 | 49 |
gut epithelium | 3.21e-09 | 55 |
bone marrow | 9.37e-09 | 16 |
endocrine gland | 3.44e-08 | 60 |
mesenchyme | 5.27e-08 | 61 |
entire embryonic mesenchyme | 5.27e-08 | 61 |
tube | 7.61e-08 | 114 |
connective tissue | 1.63e-07 | 46 |
gland | 2.54e-07 | 65 |
unilaminar epithelium | 3.66e-07 | 66 |
subdivision of trunk | 3.66e-07 | 66 |
anatomical conduit | 4.95e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.