Personal tools

FFCP PHASE1:Mm9::chr4:151236286..151236328,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr4:151236286..151236328,+
|id=chr4:151236286..151236328,+
|ontology_enrichment_celltype=CL:0000063!6.07e-09!66;CL:0000838!2.67e-08!12;CL:0000988!3.56e-08!32;CL:0002032!3.56e-08!32;CL:0000037!3.56e-08!32;CL:0000566!3.56e-08!32;CL:0000837!3.56e-08!32;CL:0000542!5.37e-08!13;CL:0000051!5.37e-08!13;CL:0002320!7.99e-08!46;CL:0000134!7.99e-08!46;CL:0000084!1.33e-07!11;CL:0000827!1.33e-07!11;CL:0000791!1.50e-07!9;CL:0000789!1.50e-07!9;CL:0002420!1.50e-07!9;CL:0002419!1.50e-07!9;CL:0000790!1.50e-07!9;CL:0000624!7.15e-07!8;CL:0002031!7.83e-07!25
|ontology_enrichment_celltype=CL:0000063!6.07e-09!66;CL:0000838!2.67e-08!12;CL:0000988!3.56e-08!32;CL:0002032!3.56e-08!32;CL:0000037!3.56e-08!32;CL:0000566!3.56e-08!32;CL:0000837!3.56e-08!32;CL:0000542!5.37e-08!13;CL:0000051!5.37e-08!13;CL:0002320!7.99e-08!46;CL:0000134!7.99e-08!46;CL:0000084!1.33e-07!11;CL:0000827!1.33e-07!11;CL:0000791!1.50e-07!9;CL:0000789!1.50e-07!9;CL:0002420!1.50e-07!9;CL:0002419!1.50e-07!9;CL:0000790!1.50e-07!9;CL:0000624!7.15e-07!8;CL:0002031!7.83e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000791,3.10e-31,9;CL:0000789,3.10e-31,9;CL:0002420,3.10e-31,9;CL:0002419,3.10e-31,9;CL:0000790,3.10e-31,9;CL:0000838,2.20e-29,12;CL:0000624,3.98e-27,8;CL:0000542,4.93e-27,13;CL:0000051,4.93e-27,13;CL:0000084,2.17e-25,11;CL:0000827,2.17e-25,11;CL:0000988,6.86e-22,32;CL:0002032,6.86e-22,32;CL:0000037,6.86e-22,32;CL:0000837,6.86e-22,32;CL:0000738,2.17e-20,17;CL:0002087,2.17e-20,17;CL:0002031,2.58e-20,25;CL:0000893,6.74e-19,6;CL:0002489,6.74e-19,6;CL:0000898,6.74e-19,6;CL:0000809,6.74e-19,6;CL:0000810,6.74e-19,6;CL:0000895,6.74e-19,6;CL:0000808,6.74e-19,6;CL:0000894,6.74e-19,6;CL:0000806,6.74e-19,6;CL:0000807,6.74e-19,6;CL:0000805,6.74e-19,6;CL:0002425,6.74e-19,6;CL:0002436,6.74e-19,6;CL:0002427,6.74e-19,6;CL:0002428,6.74e-19,6;CL:0002429,6.74e-19,6;CL:0002433,6.74e-19,6;CL:0002431,6.74e-19,6;CL:0002432,6.74e-19,6;CL:0002320,3.28e-17,46;CL:0000134,3.28e-17,46;CL:0000219,2.54e-14,54;CL:0000723,8.20e-09,91;CL:0000048,8.20e-09,91;CL:0000034,4.13e-08,97;CL:0000764,4.88e-07,3;CL:0000765,4.88e-07,3;CL:0000038,4.88e-07,3;CL:0000547,4.88e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:2531,4.88e-07,3;DOID:0060083,4.88e-07,3;DOID:1240,4.88e-07,3
|ontology_enrichment_uberon=UBERON:0002384!7.99e-08!46
|ontology_enrichment_uberon=UBERON:0002384!7.99e-08!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.28e-17,46
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,2.45334314538995,3.37892933164,3.27690336850791,0.856089841127525,1.35612670292072,2.9104124088305,1.92324885321794,0.333109761815663,0.404950534779652,0,0.315462165358238,0.685572168028694,0.84877930359606,0.255129870453209,0.198581902401771,0.783599367416806,0.159992422793407,0.45881856213434,0.57423196411502,1.29228598847722,0,0,0.252030129759931,0.221730510655305,3.81018404075779,1.84519436275371,0,0.866554859253824,0.997407872150954,1.63335485009895,0,0.7813353445238,0.523523743973798,0.588231488031014,0,1.94204141212461,0.125896817975577,0,0,0,0.218025156380447,0,0.58328969722285,0.419959264876088,0,2.85230430298152,2.17608642603403,2.01656279485478,0,0,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.151452386666368,0,6.08715426273523,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0.520455980298408,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.599075622529601,2.99951365496704,0.762421362438388,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.746441823660558,3.0326731012041,0,0.390361328888111,0.689706313300419,0.540186389416048,0.60281927134286,0.612328492361951,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,1.80143534980301,0.284163499395593,0,0.234526059981096,0,0,0,0,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.671032093801859,0.630869845692382,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0.596869416123452,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.49095073923223,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0,0.477937595905104,0.668396022247182,0,0,0.584511715822624,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0.857348140126369,0.709360934569094,0.178368817602071,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.559805809294632,0.552799895217695,0.954670618015114,0.474503990371703,0,0,0,0,0,0.330613822901344,0,0.648074866458964,0,1.12738587736838,0,0.165458490457098,0.583353565032143,0.645799117388655,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.504832249740738,0.228620419965,0,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,2.45334314538995,3.37892933164,3.27690336850791,0.856089841127525,1.35612670292072,2.9104124088305,1.92324885321794,0.333109761815663,0.404950534779652,0,0.315462165358238,0.685572168028694,0.84877930359606,0.255129870453209,0.198581902401771,0.783599367416806,0.159992422793407,0.45881856213434,0.57423196411502,1.29228598847722,0,0,0.252030129759931,0.221730510655305,3.81018404075779,1.84519436275371,0,0.866554859253824,0.997407872150954,1.63335485009895,0,0.7813353445238,0.523523743973798,0.588231488031014,0,1.94204141212461,0.125896817975577,0,0,0,0.218025156380447,0,0.58328969722285,0.419959264876088,0,2.85230430298152,2.17608642603403,2.01656279485478,0,0,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.151452386666368,0,6.08715426273523,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0.520455980298408,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.599075622529601,2.99951365496704,0.762421362438388,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.746441823660558,3.0326731012041,0,0.390361328888111,0.689706313300419,0.540186389416048,0.60281927134286,0.612328492361951,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,1.80143534980301,0.284163499395593,0,0.234526059981096,0,0,0,0,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.671032093801859,0.630869845692382,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0.596869416123452,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.49095073923223,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0,0.477937595905104,0.668396022247182,0,0,0.584511715822624,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0.857348140126369,0.709360934569094,0.178368817602071,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.559805809294632,0.552799895217695,0.954670618015114,0.474503990371703,0,0,0,0,0,0.330613822901344,0,0.648074866458964,0,1.12738587736838,0,0.165458490457098,0.583353565032143,0.645799117388655,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.504832249740738,0.228620419965,0,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p@chr4:151236286..151236328,+
|short_description=p@chr4:151236286..151236328,+
}}
}}

Revision as of 17:56, 13 November 2012

Short description:p@chr4:151236286..151236328, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:151236286..151236328, +
Coexpression cluster:MCL_coexpression_mm9:137
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:151236286..151236328+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.10e-319
alpha-beta T cell3.10e-319
immature T cell3.10e-319
mature T cell3.10e-319
immature alpha-beta T cell3.10e-319
lymphoid lineage restricted progenitor cell2.20e-2912
CD4-positive, alpha-beta T cell3.98e-278
lymphocyte4.93e-2713
common lymphoid progenitor4.93e-2713
T cell2.17e-2511
pro-T cell2.17e-2511
hematopoietic cell6.86e-2232
hematopoietic oligopotent progenitor cell6.86e-2232
hematopoietic stem cell6.86e-2232
hematopoietic multipotent progenitor cell6.86e-2232
leukocyte2.17e-2017
nongranular leukocyte2.17e-2017
hematopoietic lineage restricted progenitor cell2.58e-2025
thymocyte6.74e-196
double negative thymocyte6.74e-196
naive T cell6.74e-196
double-positive, alpha-beta thymocyte6.74e-196
CD4-positive, alpha-beta thymocyte6.74e-196
naive thymus-derived CD4-positive, alpha-beta T cell6.74e-196
DN4 thymocyte6.74e-196
DN1 thymic pro-T cell6.74e-196
DN2 thymocyte6.74e-196
DN3 thymocyte6.74e-196
immature single positive thymocyte6.74e-196
early T lineage precursor6.74e-196
mature CD4 single-positive thymocyte6.74e-196
resting double-positive thymocyte6.74e-196
double-positive blast6.74e-196
CD69-positive double-positive thymocyte6.74e-196
CD69-positive, CD4-positive single-positive thymocyte6.74e-196
CD4-positive, CD8-intermediate double-positive thymocyte6.74e-196
CD24-positive, CD4 single-positive thymocyte6.74e-196
connective tissue cell3.28e-1746
mesenchymal cell3.28e-1746
motile cell2.54e-1454
somatic stem cell8.20e-0991
multi fate stem cell8.20e-0991
stem cell4.13e-0897
erythroid lineage cell4.88e-073
erythroblast4.88e-073
erythroid progenitor cell4.88e-073
proerythroblast4.88e-073

Uber anatomy
Ontology termp-valuen
connective tissue3.28e-1746

Disease
Ontology termp-valuen
hematologic cancer4.88e-073
immune system cancer4.88e-073
leukemia4.88e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:151236286..151236328,%2B&oldid=2269244"