FFCP PHASE1:Mm9::chr12:28025234..28025239,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:28025234..28025239,- | |id=chr12:28025234..28025239,- | ||
|ontology_enrichment_celltype=CL:0000117!2.28e-14!23;CL:0000337!2.28e-14!23;CL:0002609!2.46e-14!6;CL:0000540!5.90e-14!33;CL:0000047!5.90e-14!33;CL:0000031!5.90e-14!33;CL:0000404!5.90e-14!33;CL:0000221!3.12e-12!44;CL:0000133!3.12e-12!44;CL:0000393!3.57e-11!39;CL:0000211!3.57e-11!39;CL:0002319!4.21e-11!43;CL:0000055!5.96e-09!50;CL:0002608!8.06e-08!3;CL:0002613!2.27e-07!3;CL:0002612!3.04e-07!3 | |ontology_enrichment_celltype=CL:0000117!2.28e-14!23;CL:0000337!2.28e-14!23;CL:0002609!2.46e-14!6;CL:0000540!5.90e-14!33;CL:0000047!5.90e-14!33;CL:0000031!5.90e-14!33;CL:0000404!5.90e-14!33;CL:0000221!3.12e-12!44;CL:0000133!3.12e-12!44;CL:0000393!3.57e-11!39;CL:0000211!3.57e-11!39;CL:0002319!4.21e-11!43;CL:0000055!5.96e-09!50;CL:0002608!8.06e-08!3;CL:0002613!2.27e-07!3;CL:0002612!3.04e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.40e-39,6;CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0000540,1.59e-11,33;CL:0000047,1.59e-11,33;CL:0000031,1.59e-11,33;CL:0000404,1.59e-11,33;CL:0000393,8.12e-10,39;CL:0000211,8.12e-10,39;CL:0002319,6.12e-09,43;CL:0000221,9.58e-09,44;CL:0000133,9.58e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.46e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0001017!2.76e-09!73;UBERON:0005743!2.76e-09!73;UBERON:0004121!5.54e-09!102;UBERON:0000924!5.54e-09!102;UBERON:0006601!5.54e-09!102;UBERON:0000073!6.80e-09!75;UBERON:0001016!6.80e-09!75;UBERON:0002346!2.09e-08!71;UBERON:0003075!2.09e-08!71;UBERON:0007284!2.09e-08!71;UBERON:0002780!4.08e-08!39;UBERON:0001890!4.08e-08!39;UBERON:0006240!4.08e-08!39;UBERON:0003080!7.88e-08!40;UBERON:0003056!1.28e-07!49;UBERON:0000369!1.55e-07!5;UBERON:0002435!1.55e-07!5;UBERON:0000204!1.55e-07!5;UBERON:0010082!1.55e-07!5;UBERON:0002791!1.63e-07!29;UBERON:0003528!1.63e-07!29;UBERON:0001893!1.63e-07!29;UBERON:0002257!3.04e-07!3;UBERON:0000033!8.29e-07!63;UBERON:0002616!9.65e-07!49 | |ontology_enrichment_uberon=UBERON:0002020!3.46e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0001017!2.76e-09!73;UBERON:0005743!2.76e-09!73;UBERON:0004121!5.54e-09!102;UBERON:0000924!5.54e-09!102;UBERON:0006601!5.54e-09!102;UBERON:0000073!6.80e-09!75;UBERON:0001016!6.80e-09!75;UBERON:0002346!2.09e-08!71;UBERON:0003075!2.09e-08!71;UBERON:0007284!2.09e-08!71;UBERON:0002780!4.08e-08!39;UBERON:0001890!4.08e-08!39;UBERON:0006240!4.08e-08!39;UBERON:0003080!7.88e-08!40;UBERON:0003056!1.28e-07!49;UBERON:0000369!1.55e-07!5;UBERON:0002435!1.55e-07!5;UBERON:0000204!1.55e-07!5;UBERON:0010082!1.55e-07!5;UBERON:0002791!1.63e-07!29;UBERON:0003528!1.63e-07!29;UBERON:0001893!1.63e-07!29;UBERON:0002257!3.04e-07!3;UBERON:0000033!8.29e-07!63;UBERON:0002616!9.65e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.32e-13,29;UBERON:0002791,5.32e-13,29;UBERON:0001893,5.32e-13,29;UBERON:0000956,9.92e-12,21;UBERON:0001869,9.92e-12,21;UBERON:0000203,9.92e-12,21;UBERON:0002020,3.72e-11,34;UBERON:0002780,8.86e-10,39;UBERON:0001890,8.86e-10,39;UBERON:0006240,8.86e-10,39;UBERON:0003080,1.52e-09,40;UBERON:0002616,2.39e-08,46;UBERON:0000955,3.53e-08,47;UBERON:0006238,3.53e-08,47;UBERON:0003056,7.37e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.67e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,0,0,0,0,0,0,0,0,2.07379224616955,2.29510095163874,1.89292465216244,0,0,0.979926393719632,1.15014565221884,0.919218786610021,0,0,0,0.527545150920775,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,0,0,0,0,0,0,0,0,2.07379224616955,2.29510095163874,1.89292465216244,0,0,0.979926393719632,1.15014565221884,0.919218786610021,0,0,0,0.527545150920775,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr12:28025234..28025239,- | |short_description=p@chr12:28025234..28025239,- | ||
}} | }} |
Revision as of 15:25, 14 November 2012
Short description: | p@chr12:28025234..28025239, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28025234..28025239, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.40e-39 | 6 |
CNS neuron (sensu Vertebrata) | 2.52e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-16 | 23 |
neuron | 1.59e-11 | 33 |
neuronal stem cell | 1.59e-11 | 33 |
neuroblast | 1.59e-11 | 33 |
electrically signaling cell | 1.59e-11 | 33 |
electrically responsive cell | 8.12e-10 | 39 |
electrically active cell | 8.12e-10 | 39 |
neural cell | 6.12e-09 | 43 |
ectodermal cell | 9.58e-09 | 44 |
neurectodermal cell | 9.58e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.32e-13 | 29 |
regional part of telencephalon | 5.32e-13 | 29 |
telencephalon | 5.32e-13 | 29 |
cerebral cortex | 9.92e-12 | 21 |
cerebral hemisphere | 9.92e-12 | 21 |
pallium | 9.92e-12 | 21 |
gray matter | 3.72e-11 | 34 |
regional part of forebrain | 8.86e-10 | 39 |
forebrain | 8.86e-10 | 39 |
future forebrain | 8.86e-10 | 39 |
anterior neural tube | 1.52e-09 | 40 |
regional part of brain | 2.39e-08 | 46 |
brain | 3.53e-08 | 47 |
future brain | 3.53e-08 | 47 |
pre-chordal neural plate | 7.37e-08 | 49 |
central nervous system | 1.48e-07 | 73 |
neural tube | 2.00e-07 | 52 |
neural rod | 2.00e-07 | 52 |
future spinal cord | 2.00e-07 | 52 |
neural keel | 2.00e-07 | 52 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.67e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.