FFCP PHASE1:Hg19::chr18:67956289..67956296,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000557!1.92e-09!71;CL:0000839!8.49e-09!70;CL:0000860!1.60e-08!45;CL:0002057!2.28e-08!42;CL:0002009!1.05e-07!65;CL:0002194!1.67e-07!63;CL:0000576!1.67e-07!63;CL:0000040!1.67e-07!63;CL:0000559!1.67e-07!63;CL:0000766!1.72e-07!76 | |ontology_enrichment_celltype=CL:0000557!1.92e-09!71;CL:0000839!8.49e-09!70;CL:0000860!1.60e-08!45;CL:0002057!2.28e-08!42;CL:0002009!1.05e-07!65;CL:0002194!1.67e-07!63;CL:0000576!1.67e-07!63;CL:0000040!1.67e-07!63;CL:0000559!1.67e-07!63;CL:0000766!1.72e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.73e-17;33!CL:0002057;3.73e-17;33!CL:0000097;2.95e-14;5!CL:0000473;2.85e-12;39!CL:0000234;2.85e-12;39!CL:0000576;1.19e-10;48!CL:0000766;2.60e-09;69!CL:0000163;9.90e-08;9 | |ontology_enrichment_celltype_v019=CL:0000860;3.73e-17;33!CL:0002057;3.73e-17;33!CL:0000097;2.95e-14;5!CL:0000473;2.85e-12;39!CL:0000234;2.85e-12;39!CL:0000576;1.19e-10;48!CL:0000766;2.60e-09;69!CL:0000163;9.90e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.90e-18,66;CL:0000557,1.36e-17,67;CL:0000766,6.12e-16,72;CL:0000860,4.08e-15,42;CL:0002057,4.08e-15,42;CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0000473,2.00e-14,48;CL:0000234,2.00e-14,48;CL:0002194,4.38e-12,59;CL:0000576,4.38e-12,59;CL:0000040,4.38e-12,59;CL:0000559,4.38e-12,59;CL:0002009,1.54e-11,61;CL:0000763,1.51e-10,108;CL:0000049,1.51e-10,108;CL:0000163,7.69e-08,9;CL:0002031,3.28e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.74e-11;42 | |ontology_enrichment_development_v019=CL:0002057;6.74e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.06e-09!80;UBERON:0004765!3.34e-08!101;UBERON:0001434!3.34e-08!101;UBERON:0001474!8.36e-08!86;UBERON:0000062!1.40e-07!511;UBERON:0000468!5.90e-07!659;UBERON:0000467!8.01e-07!625 | |ontology_enrichment_uberon=UBERON:0002371!3.06e-09!80;UBERON:0004765!3.34e-08!101;UBERON:0001434!3.34e-08!101;UBERON:0001474!8.36e-08!86;UBERON:0000062!1.40e-07!511;UBERON:0000468!5.90e-07!659;UBERON:0000467!8.01e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.58e-07;10!UBERON:0000158;6.58e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0005631;6.58e-07;10!UBERON:0000158;6.58e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-16,76;UBERON:0002390,9.48e-15,98;UBERON:0003061,9.48e-15,98;UBERON:0001474,1.15e-14,82;UBERON:0004765,4.57e-14,90;UBERON:0002193,1.02e-12,108;UBERON:0002405,3.56e-12,93;UBERON:0001434,5.36e-12,100;UBERON:0003081,2.78e-08,203 | |||
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| ||
|short_description=p3@SOCS6 | |short_description=p3@SOCS6 | ||
}} | }} |
Revision as of 01:36, 16 November 2012
Short description: | p3@SOCS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SOCS6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 121bp_to_ENST00000397942_5end |
EntrezGene: | SOCS6 |
HGNC: | 16833 |
UniProt: | O14544 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.90e-18 | 66 |
granulocyte monocyte progenitor cell | 1.36e-17 | 67 |
myeloid leukocyte | 6.12e-16 | 72 |
classical monocyte | 4.08e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-15 | 42 |
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
defensive cell | 2.00e-14 | 48 |
phagocyte | 2.00e-14 | 48 |
monopoietic cell | 4.38e-12 | 59 |
monocyte | 4.38e-12 | 59 |
monoblast | 4.38e-12 | 59 |
promonocyte | 4.38e-12 | 59 |
macrophage dendritic cell progenitor | 1.54e-11 | 61 |
myeloid cell | 1.51e-10 | 108 |
common myeloid progenitor | 1.51e-10 | 108 |
endocrine cell | 7.69e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.28e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-16 | 76 |
hematopoietic system | 9.48e-15 | 98 |
blood island | 9.48e-15 | 98 |
bone element | 1.15e-14 | 82 |
skeletal element | 4.57e-14 | 90 |
hemolymphoid system | 1.02e-12 | 108 |
immune system | 3.56e-12 | 93 |
skeletal system | 5.36e-12 | 100 |
lateral plate mesoderm | 2.78e-08 | 203 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.